Items where Subject is "Centre for Biosystems Science and Engineering"

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Achuth Rao, MV and Yadav, S and Ghosh, PK (2017) A dual source-filter model of snore audio for snorer group classification. In: 18th Annual Conference of the International Speech Communication Association, INTERSPEECH 2017, 20 - 24 August 2017, Stockholm, pp. 3502-3506.

Adhikary, R and Roy, A and Jolly, MK and Das, D (2023) Effects of microRNA-mediated negative feedback on gene expression noise. In: Biophysical Journal, 122 (21). pp. 4220-4240.

Adiga, V and Adiga, B and Adiga, PC and Roy Mahapatra, D and Hegde, G (2021) Hermetic Sealed Perovskite Solar Cells: Water Stable Encapsulation. In: 48th IEEE Photovoltaic Specialists Conference, PVSC 2021, 20-25 Jun 2021, Bengaluru; India, pp. 904-907.

Adler, FR and Anderson, ARA and Bhushan, A and Bogdan, P and Bravo-Cordero, JJ and Brock, A and Chen, Y and Cukierman, E and DelGiorno, KE and Denis, GV and Ferrall-Fairbanks, MC and Gartner, ZJ and Germain, RN and Gordon, DM and Hunter, G and Jolly, MK and Karacosta, LG and Mythreye, K and Katira, P and Kulkarni, RP and Kutys, ML and Lander, AD and Laughney, AM and Levine, H and Lou, E and Lowenstein, PR and Masters, KS and Pe'er, D and Peyton, SR and Platt, MO and Purvis, JE and Quon, G and Richer, JK and Riddle, NC and Rodriguez, A and Snyder, JC and Lee Szeto, G and Tomlin, CJ and Yanai, I and Zervantonakis, IK and Dueck, H (2023) Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation. In: Cell Systems, 14 (4). pp. 252-257.

Agarwal, P and Toley, BJ (2022) Unreacted Labeled PCR Primers Inhibit the Signal in a Nucleic Acid Lateral Flow Assay as Elucidated by a Transport Reaction Model. In: ACS Measurement Science Au, 2 (4). pp. 317-324.

Agarwal, Rachit and Johnson, Christopher T and Imhoff, Barry R and Donlan, Rodney M and McCarty, Nael A and Garcia, Andres J (2018) Inhaled bacteriophage-loaded polymeric microparticles ameliorate acute lung infections. In: NATURE BIOMEDICAL ENGINEERING, 2 (11). pp. 841-849.

Aggarwal, A and Naskar, S and Maroli, N and Gorai, B and Dixit, NM and Maiti, PK (2021) Mechanistic insights into the effects of key mutations on SARS-CoV-2 RBD-ACE2 binding. In: Physical Chemistry Chemical Physics, 23 (46). pp. 26451-26458.

Aggarwal, V and Sahoo, S and Donnenberg, VS and Chakraborty, P and Jolly, MK and Sant, S (2022) P4HA2: A link between tumor-intrinsic hypoxia, partial EMT and collective migration. In: Advances in Cancer Biology - Metastasis, 5 .

Agrawal, A and Hari, KVS and Arun, SP (2020) A compositional neural code in high-level visual cortex can explain jumbled word reading. In: eLife, 9 .

Agrawal, A and Nag, S and Hari, KVS and Arun, SP (2022) Letter Processing in Upright Bigrams Predicts Reading Fluency Variations in Children. In: Journal of Experimental Psychology: General .

Agrawal, Ayush and Apoorva, K and Ayappa, KG (2017) Transmembrane oligomeric intermediates of pore forming toxin Cytolysin A determine leakage kinetics. In: RSC ADVANCES, 7 (82). pp. 51750-51762.

Agrawal, P and Katragadda, S and Hariharan, AK and Raghavendrachar, VG and Agarwal, A and Dayalu, R and Awasthy, D and Sharma, SC and Sivasamy, YK and Lakshmana, P and Shanmugam, A and Veeramachaneni, V and Gupta, V and Vani, BP and Subaiya, L and Syamala, TS and Hariharan, R and Chandru, V and Bloom, DE (2021) Validation of whole genome sequencing from dried blood spots. In: BMC Medical Genomics, 14 (1).

Agrawal, Ruchi and Kumar, Prem and Ramanan, Harini and Saini, Deepak Kumar (2016) FRET reveals multiple interaction states between two component signalling system proteins of M. tuberculosis. In: BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1860 (7). pp. 1498-1507.

Agrawal, Ruchi and Sahoo, Bikash Kumar and Saini, Deepak Kumar (2016) Cross-talk and specificity in two-component signal transduction pathways. In: FUTURE MICROBIOLOGY, 11 (5). pp. 685-697.

Aiyar, Y and Chandru, V and Chatterjee, M and Desai, S and Fernandez, A and Gupta, A and Kang, G and Khanna, T and Mazumdar-Shaw, K and Mor, N and Mukherji, A and Muttreja, P and Narayan, T and Patwardhan, B and Rao, KS and Sharma, S and Shetty, D and Subramanian, SV and Varkey, LEC and Venkateswaran, S and Patel, V (2021) India's resurgence of COVID-19: urgent actions needed. In: The Lancet, 397 (10291). pp. 2232-2234.

Akshay, PS and Veena, SM and Teja, KB and Tomar, SJ (2023) Severe Acute Respiratory Syndrome Associated Corona Virus SARS-CoV. [Book Chapter]

Alagarasan, D and Varadharajaperumal, S and Arun Kumar, KD and Naik, R and Arunkumar, A and Ganesan, R and Hegde, G and El Sayed Massoud, E (2021) Optimization of different temperature annealed nanostructured CdSe thin film for photodetector applications. In: Optical Materials, 122 .

Alakesh, A and Jothiprakasam, T and Raghavan, JV and Jhunjhunwala, S (2022) Sterile inflammation alters neutrophil kinetics in mice. In: Journal of Leukocyte Biology .

Ananthanarayanan, V (2020) Voices of the new generation: mentorship as a junior PI. In: Nature Reviews Molecular Cell Biology, 21 (10). p. 562.

Ananthanarayanan, V and Mylavarapu, SVS (2020) Meeting report - the Microtubules, Motors, Transport and Trafficking (M2T2) 2019 meeting. In: The Molecular Motors, Transport and Trafficking (M2T2) meeting, 18-20 October, 2019, National Brain Research Centre (NBRC), Manesar, India.

Ananthanarayanan, Vaishnavi (2019) Cell scientist to watch - Vaishnavi Ananthanarayanan. In: JOURNAL OF CELL SCIENCE, 132 (11).

Ansari, AF and Reddy, YBS and Raut, J and Dixit, NM (2021) An efficient and scalable top-down method for predicting structures of microbial communities. In: Nature Computational Science, 1 (9). pp. 619-628.

Antony, A and P, P and Jedryka, J and Ozga, K and Hegde, G and Kulkarni, SD and Chandra Petwal, V and Verma, VP and Dwivedi, J (2021) Enhancement of defects induced optical nonlinearity in Al: ZnO thin films by electron beam. In: Materials Science in Semiconductor Processing, 128 .

Arora, G and Banerjee, M and Langthasa, J and Bhat, R and Chatterjee, S (2023) Targeting metabolic fluxes reverts metastatic transitions in ovarian cancer. In: iScience, 26 (11).

Ashwini, R and Mohanta, Z and Kumar, MKP and Santosh, MS and Srivastava, C (2021) Enhanced heterogeneous electron transfer kinetics in Graphene Oxide produced from mechanically milled Graphite. In: Carbon Trends, 5 .

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BV, H and Jolly, MK (2024) Proneural-mesenchymal antagonism dominates the patterns of phenotypic heterogeneity in glioblastoma. In: iScience, 27 (3).

Badal, D and Jayarani, AV and Kollaran, MA and Kumar, A and Singh, V (2020) Pseudomonas aeruginosa bioflm formation on endotracheal tubes requires multiple two-component systems. In: Journal of Medical Microbiology, 69 (6). pp. 906-919.

Badal, D and Jayarani, AV and Kollaran, MA and Prakash, D and Monisha, P and Singh, V (2021) Foraging Signals Promote Swarming in Starving Pseudomonas aeruginosa. In: mBio, 12 (5).

Bagheri, Meisam and Nair, Raji R and Singh, Krishna Kumar and Saini, Deepak Kumar (2017) ATM-ROS-iNOS axis regulates nitric oxide mediated cellular senescence. In: BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 1864 (1). pp. 177-190.

Bairathi, V and Blaschke, D and Bravina, L and Brooks, WK and Chhabra, T and Kabana, S and Kuleshov, S and Potashnikova, I and Sagun, V and Vitiuk, O and Zabrodin, E and Zherebtsova, E (2024) Study of thermal properties of the medium produced in Au+Au collisions at �sNN=7.7 GeV using a thermal model. In: International Journal of Modern Physics A, 39 (28).

Balachander, GM and Kotcherlakota, R and Nayak, B and Kedaria, D and Rangarajan, A and Chatterjee, K (2021) 3D Tumor Models for Breast Cancer: Whither We Are and What We Need. In: ACS Biomaterials Science and Engineering .

Balachander, Gowri Manohari and Balaji, Sai A and Rangarajan, Annapoorni and Chatterjee, Kaushik (2015) Enhanced Metastatic Potential in a 3D Tissue Scaffold toward a Comprehensive in Vitro Model for Breast Cancer Metastasis. In: ACS APPLIED MATERIALS & INTERFACES, 7 (50). pp. 27810-27822.

Balachander, Gowri Manohari and Talukdar, Pinku Mani and Debnath, Monojit and Rangarajan, Annapoorni and Chatterjee, Kaushik (2018) Inflammatory Role of Cancer-Associated Fibroblasts in Invasive Breast Tumors Revealed Using a Fibrous Polymer Scaffold. In: ACS APPLIED MATERIALS & INTERFACES, 10 (40). pp. 33814-33826.

Balaji, VR and Dhanabalan, SS and Sridarshini, T and Robinson, S and Murugan, M and Hegde, G (2023) Photonic Crystal Drop Filter for DWDM Systems. In: Virtual International Conference on Futuristic Communication and Network Technologies, VICFCNT 2021, 10 - 11 December 2021, pp. 483-493.

Balakrishnan, Arjun and Das Sarma, Priya and Bhattacharjee, Oindrilla and Kim, Jong Myoung and Das Sarma, Shiladitya and Chakravortty, Dipshikha (2016) Halobacterial nano vesicles displaying murine bactericidal permeability-increasing protein rescue mice from lethal endotoxic shock. In: SCIENTIFIC REPORTS, 6 .

Balakrishnan, Arjun and Schnare, Markus and Chakravortty, Dipshikha (2016) Of Men not Mice: Bactericidal/Permeability-increasing Protein expressed in human Macrophages acts as a Phagocytic receptor and Modulates entry and replication of gram-negative Bacteria. In: FRONTIERS IN IMMUNOLOGY, 7 .

Balakrishnan, S and Mathad, SS and Sharma, G and Raju, SR and Reddy, UB and Das, S and Ananthasuresh, GK (2019) A Nondimensional Model Reveals Alterations in Nuclear Mechanics upon Hepatitis C Virus Replication. In: Biophysical Journal, 116 (7). pp. 1328-1339.

Banerjee, Sunaina and Maurya, Satyaghosh and Roy, Rahul (2018) Single-molecule fluorescence imaging: Generating insights into molecular interactions in virology. In: JOURNAL OF BIOSCIENCES, 43 (3). pp. 519-540.

Banerjee, U and Baloni, P and Singh, A and Chandra, N (2021) Immune Subtyping in Latent Tuberculosis. In: Frontiers in Immunology, 12 .

Banerjee, U and Chunchanur, S and R, A and Balaji, KN and Singh, A and Chakravortty, D and Chandra, N (2023) Systems-level profiling of early peripheral host-response landscape variations across COVID-19 severity states in an Indian cohort. In: Genes and Immunity .

Banerjee, U and Sankar, S and Singh, A and Chandra, N (2020) A Multi-Pronged Computational Pipeline for Prioritizing Drug Target Strategies for Latent Tuberculosis. In: Frontiers in Chemistry, 8 .

Baral, S and Raja, R and Sen, P and Dixit, NM (2019) Towards multiscale modeling of the CD8 + T cell response to viral infections. In: Wiley Interdisciplinary Reviews: Systems Biology and Medicine .

Baral, Subhasish and Antia, Rustom and Dixit, Narendra M (2019) A dynamical motif comprising the interactions between antigens and CD8 T cells may underlie the outcomes of viral infections. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116 (35). pp. 17393-17398.

Baral, Subhasish and Raja, Rubesh and Sen, Pramita and Dixit, Narendra M (2019) Towards multiscale modeling of the CD8(+) T cell response to viral infections. In: WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE, 11 (4).

Baral, Subhasish and Roy, Rahul and Dixit, Narendra M (2018) Modeling how reversal of immune exhaustion elicits cure of chronic hepatitis C after the end of treatment with direct-acting antiviral agents. In: IMMUNOLOGY AND CELL BIOLOGY, 96 (9). pp. 969-980.

Barbier, I and Kusumawardhani, H and Chauhan, L and Harlapur, PV and Jolly, MK and Schaerli, Y (2023) Synthetic Gene Circuits Combining CRISPR Interference and CRISPR Activation in E. coli: Importance of Equal Guide RNA Binding Affinities to Avoid Context-Dependent Effects. In: ACS Synthetic Biology, 12 (10). pp. 3064-3071.

Barnabas, V and Kashyap, A and Raja, R and Newar, K and Rai, D and Dixit, NM and Mehra, S (2022) The Extent of Antimicrobial Resistance Due to Efflux Pump Regulation. In: ACS Infectious Diseases .

Barui, S and Chowdhury, S and Samajdar, R and Chakraborty, S and Gavade, M and Basu, B (2020) Impact of �core-shell� mode of printing on properties of 3D binderjet printed zirconia-alumina based bioceramics. In: Open Ceramics, 3 .

Barui, S and Hadagalli, K and Mukherjee, S and Roy, S and Bhattacharjee, D and Basu, B (2022) Pilot-scale manufacturing of phase-pure and highly crystalline hydroxyapatite: Lessons learned and process protocols. In: International Journal of Applied Ceramic Technology, 19 (2). pp. 762-772.

Barui, S and Mishra, D and Gowtham, NH and Basu, B (2022) No more ‘core-shell’ in binderjetting of bioceramics: Novel solution and experimental validation in microstructure and mechanical properties. In: Journal of the European Ceramic Society, 43 (3). 1178 -1188.

Barui, Srimanta and Mandal, Sourav and Basu, Bikramjit (2017) Thermal inkjet 3D powder printing of metals and alloys: Current status and challenges. In: Current Opinion in Biomedical Engineering, 2 . pp. 116-123. ISSN 24684511

Barui, Srimanta and Panda, Asish K and Naskar, S and Kuppuraj, R and Basu, Saptarshi and Basu, Bikramjit (2019) 3D inkjet printing of biomaterials with strength reliability and cytocompatibility: Quantitative process strategy for Ti-6Al-4V. In: BIOMATERIALS, 213 .

Basu, B and Bhaskar, N and Barui, S and Sharma, V and Das, S and Govindarajan, N and Hegde, P and Perikal, PJ and Antharasanahalli Shivakumar, M and Khanapure, K and Tekkatte Jagannatha, A (2021) Evaluation of implant properties, safety profile and clinical efficacy of patient-specific acrylic prosthesis in cranioplasty using 3D binderjet printed cranium model: A pilot study. In: Journal of Clinical Neuroscience, 85 . pp. 132-142.

Basu, B and Kalin, M and Manoj Kumar, BV (2020) Friction and Wear of Ceramics: Principles and Case Studies. [Book Chapter]

Basu, S and Basu, B and Maiti, PK (2022) A computational study on strontium ion modified hydroxyapatite-fibronectin interactions. In: Physical Chemistry Chemical Physics, 24 (45). pp. 27989-28002.

Basu, S and Gorai, B and Basu, B and Maiti, PK (2021) Electric Field-Mediated Fibronectin-Hydroxyapatite Interaction: A Molecular Insight. In: Journal of Physical Chemistry B, 125 (1). pp. 3-16. (In Press)

Basu, S and Nag, S and Kottan, NB and Basu, B (2022) In silico study on probing atomistic insights into structural stability and tensile properties of Fe-doped hydroxyapatite single crystals. In: Scientific Reports, 12 (1).

Basu, Subhadip and Basu, Bikramjit (2019) Doped biphasic calcium phosphate: synthesis and structure. In: JOURNAL OF ASIAN CERAMIC SOCIETIES, 7 (3). pp. 265-283.

Behera, Bhagaban and Vishnu, Anil G K and Chatterjee, Suman and Sitaramgupta, V S N V and Sreekumar, Niranjana and Nagabhushan, Apoorva and Rajendran, Nirmala and Prathik, B H and Pandya, Hardik J (2019) Emerging technologies for antibiotic susceptibility testing. In: BIOSENSORS & BIOELECTRONICS, 142 .

Bhaskar, N and Kachappilly, MC and Bhushan, V and Pandya, HJ and Basu, B (2022) Electrical field stimulated modulation of cell fate of pre-osteoblasts on PVDF/BT/MWCNT based electroactive biomaterials. In: Journal of Biomedical Materials Research - Part A .

Bhaskar, Nitu and Padmavathy, Nagarajan and Jain, Shubham and Bose, Suryasarathi and Basu, Bikramjit (2016) Modulated in Vitro Biocompatibility of a Unique Cross-Linked Salicylic Acid-Poly(epsilon-caprolactone)-Based Biodegradable Polymer. In: ACS APPLIED MATERIALS & INTERFACES, 8 (43). pp. 29721-29733.

Bhaskar, Nitu and Sarkar, Debasish and Basu, Bikramjit (2018) Probing Cytocompatibility, Hemocompatibility, and Quantitative Inflammatory Response in Mus musculus toward Oxide Bioceramic Wear Particulates and a Comparison with CoCr. In: ACS BIOMATERIALS SCIENCE & ENGINEERING, 4 (9). pp. 3194-3210.

Bhat, Imtiyaz Ahmad and Jain, Ruchi and Siddiqui, Mujahuddin M and Saini, Deepak K and Mukherjee, Partha Sarathi (2017) Water-Soluble Pd8L4 Self-assembled Molecular Barrel as an Aqueous Carrier for Hydrophobic Curcumin. In: INORGANIC CHEMISTRY, 56 (9). pp. 5352-5360.

Bhattacharya, S and Mohanty, A and Achuthan, S and Kotnala, S and Jolly, MK and Kulkarni, P and Salgia, R (2021) Group Behavior and Emergence of Cancer Drug Resistance. In: Trends in Cancer, 7 (4). pp. 323-334.

Bhavya, MB and Prabhu B, R and Shenoy, BM and Bhol, P and Swain, S and Saxena, M and John, NS and Hegde, G and Samal, AK (2020) Femtomolar detection of thiram: via SERS using silver nanocubes as an efficient substrate. In: Environmental Science: Nano, 7 (12). pp. 3999-4009.

Bhosle, A and Datey, A and Chandrasekharan, G and Singh, D and Chakravortty, D and Chandra, N (2020) A Strategic Target Rescues Trimethoprim Sensitivity in Escherichia coli. In: iScience, 23 (4).

Bhusari, Shardul Atul and Sharma, Vidushi and Bose, Suryasarathi and Basu, Bikramjit (2019) HDPE/UHMWPE hybrid nanocomposites with surface functionalized graphene oxide towards improved strength and cytocompatibility. In: JOURNAL OF THE ROYAL SOCIETY INTERFACE, 16 (150).

Biswas, K and Jolly, MK and Ghosh, A (2021) First passage time properties of miRNA-mediated protein translation. In: Journal of Theoretical Biology, 529 .

Biswas, K and Jolly, MK and Ghosh, A (2022) Mean residence times of TF-TF and TF-miRNA toggle switches. In: Journal of Biosciences, 47 (2).

Biswas, K and Jolly, MK and Ghosh, A (2019) Stability and mean residence times for hybrid epithelial/mesenchymal phenotype. In: Physical Biology, 16 (2).

Bocci, F and Jia, D and Nie, Q and Jolly, MK and Onuchic, J (2023) Theoretical and computational tools to model multistable gene regulatory networks. In: Reports on Progress in Physics, 86 (10).

Bocci, F and Onuchic, JN and Jolly, MK (2020) Understanding the Principles of Pattern Formation Driven by Notch Signaling by Integrating Experiments and Theoretical Models. In: Frontiers in Physiology, 11 .

Bocci, Federico and Gearhart-Serna, Larisa and Boareto, Marcelo and Ribeiro, Mariana and Ben-Jacob, Eshel and Devi, Gayathri R and Levine, Herbert and Onuchic, Jose Nelson and Jolly, Mohit Kumar (2019) Toward understanding cancer stem cell heterogeneity in the tumor microenvironment. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116 (1). pp. 148-157.

Bocci, Federico and Jolly, Mohit Kumar and Onuchic, Jose Nelson (2019) A Biophysical Model Uncovers the Size Distribution of Migrating Cell Clusters across Cancer Types. In: CANCER RESEARCH, 79 (21). pp. 5527-5535.

Bocci, Federico and Tripathi, Satyendra C and Mercedes, Samuel A Vilchez and George, Jason T and Casabar, Julian P and Wong, Pak Kin and Hanash, Samir M and Levine, Herbert and Onuchic, Jose N and Jolly, Mohit Kumar (2019) NRF2 activates a partial epithelial-mesenchymal transition and is maximally present in a hybrid epithelial/mesenchymal phenotype. In: INTEGRATIVE BIOLOGY, 11 (6). pp. 251-263.

Boda, Sunil Kumar and Pandit, Subhendu and Garai, Aditya and Pal, Debnath and Basu, Bikramjit (2016) Bacterial siderophore mimicking iron complexes as DNA targeting antimicrobials. In: RSC ADVANCES, 6 (45). pp. 39245-39260.

Boda, Sunil Kumar and Ravikumar, K and Saini, Deepak K and Basu, Bikramjit (2015) Differential viability response of prokaryotes and eukaryotes to high strength pulsed magnetic stimuli. In: BIOELECTROCHEMISTRY, 106 (B). pp. 276-289.

Boda, Sunil Kumar and Thrivikraman, Greeshma and Panigrahy, Bharati and Sarma, D D and Basu, Bikramjit (2017) Competing Roles of Substrate Composition, Microstructure, and Sustained Strontium Release in Directing Osteogenic Differentiation of hMSCs. In: ACS APPLIED MATERIALS & INTERFACES, 9 (23). pp. 19389-19408.

Boruah, B and Samantaray, PK and Madras, G and Modak, J M and Bose, S (2020) Sustainable photocatalytic water remediation via dual active strongly coupled AgBiO3 on PVDF/PBSA membranes. In: Chemical Engineering Journal, 394 .

Bose, S and Volpatti, LR and Thiono, D and Yesilyurt, V and McGladrigan, C and Tang, Y and Facklam, A and Wang, AR and Jhunjhunwala, S and Veiseh, O and Hollister-Lock, J and Bhattacharya, C and Weir, GC and Greiner, DL and Langer, R and Anderson, DG (2020) A retrievable implant for the long-term encapsulation and survival of therapeutic xenogeneic cells. In: Nature Biomedical Engineering, 4 (8). pp. 814-826.

Brown, MS and Abdollahi, B and Wilkins, OM and Lu, H and Chakraborty, P and Ognjenovic, NB and Muller, KE and Jolly, MK and Christensen, BC and Hassanpour, S and Pattabiraman, DR (2022) Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer. In: Science Advances, 8 (31).

Bs, A and Gk, AV and Rao, S and Beniwal, M and Pandya, HJ (2022) Electrical Phenotyping of Human Brain Tissues: An Automated System for Tumor Delineation. In: IEEE Access, 10 . pp. 17908-17919.

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Capp, J-P and Jolly, MK and Sharma, A (2021) Editorial: Non-Genetic Heterogeneity in Development and Disease. In: Frontiers in Genetics, 12 .

Catalanotto, M and Vaz, JM and Abshire, C and Youngblood, R and Chu, M and Levine, H and Jolly, MK and Dragoi, A-M (2024) Dual role of CASP8AP2/FLASH in regulating epithelial-to-mesenchymal transition plasticity (EMP). In: Translational Oncology, 39 .

Chacko, Leeba Ann and Mehta, Kritika and Ananthanarayanan, Vaishnavi (2019) Cortical tethering of mitochondria by the anchor protein Mcp5 enables uniparental inheritance. In: JOURNAL OF CELL BIOLOGY, 218 (11). pp. 3560-3571.

Chakrabortty, Tuhin and Suman, Akash and Gupta, Anjali and Singh, Varsha and Varma, Manoj (2019) Null model exhibiting synchronized dynamics in uncoupled oscillators. In: PHYSICAL REVIEW E, 99 (5).

Chakraborty, A and Chandru, V (2020) A Robust and Non-parametric Model for Prediction of Dengue Incidence. In: Journal of the Indian Institute of Science, 100 (4). pp. 893-899.

Chakraborty, P and George, JT and Tripathi, S and Levine, H and Jolly, MK (2020) Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum. In: Frontiers in Bioengineering and Biotechnology, 8 .

Chakraborty, P and George, JT and Woodward, WA and Levine, H and Jolly, MK (2021) Gene expression profiles of inflammatory breast cancer reveal high heterogeneity across the epithelial-hybrid-mesenchymal spectrum. In: Translational Oncology, 14 (4).

Chandorkar, Yashoda and Ravikumar, K and Basu, Bikramjit (2019) The Foreign Body Response Demystified. In: ACS BIOMATERIALS SCIENCE & ENGINEERING, 5 (1, SI). pp. 19-44.

Chandra, K and Chowdhury, AR and Chatterjee, R and Chakravortty, D (2022) GH18 family glycoside hydrolase Chitinase A of Salmonella enhances virulence by facilitating invasion and modulating host immune responses. In: PLoS Pathogens, 18 (4).

Chandra, Kasturi and Garai, Preeti and Chakravortty, Jayanta and Chakravortty, Dipshikha (2017) Peptide transporter YjiY influences the expression of the virulence gene mgtC to regulate biofilm formation in Salmonella. In: FEMS Microbiology Letters, 364 (24). ISSN 1574-6968

Chandra, N and Menon, GI (2020) Editorial overview: Biophysical and computational methods. In: Current Opinion in Structural Biology .

Chandru, V (2020) Exponential Technologies and the Perfect Storm for Digital Health. In: Journal of the Indian Institute of Science, 100 (4). pp. 593-595.

Chandru, V (2020) From digital technology to living machines. In: Current Science, 119 (12). pp. 1879-1880.

Chandru, Vijay and Dasgupta, Sudeshna (2005) Minimal unsatisfiable sets: Classification and bounds. In: 9th Asian Computing Science Conference, DEC 08-10, 2004, Chiang Mai, THAILAND.

Chatterjee, A and Chahare, NR and Kondaiah, P and Gundiah, N (2021) Role of Fiber Orientations in the Mechanics of Bioinspired Fiber-Reinforced Elastomers. In: Soft Robotics, 8 (6). pp. 640-650.

Chatterjee, A and Kondaiah, P and Gundiah, N (2022) Stress fiber growth and remodeling determines cellular morphomechanics under uniaxial cyclic stretch. In: Biomechanics and Modeling in Mechanobiology .

Chatterjee, B and Sandhu, HS and Dixit, NM (2022) Modeling recapitulates the heterogeneous outcomes of SARS-CoV-2 infection and quantifies the differences in the innate immune and CD8 T-cell responses between patients experiencing mild and severe symptoms. In: PLoS Pathogens, 18 (6).

Chatterjee, N and Pulipaka, B and Subbalakshmi, AR and Jolly, MK and Nair, R (2023) Unraveling the dangerous duet between cancer cell plasticity and drug resistance. In: Computational and Systems Oncology, 3 (3).

Chatterjee, R and Chowdhury, AR and Mukherjee, D and Chakravortty, D (2023) From Eberthella typhi to Salmonella Typhi: The Fascinating Journey of the Virulence and Pathogenicity of Salmonella Typhi. In: ACS Omega, 8 (29). pp. 25674-25697.

Chatterjee, R and Chowdhury, AR and Mukherjee, D and Chakravortty, D (2021) Lipid larceny: channelizing host lipids for establishing successful pathogenesis by bacteria. In: Virulence, 12 (1). pp. 195-216.

Chatterjee, R and Chowdhury, AR and Nair, AV and Hajra, D and Kar, A and Datey, A and Shankar, S and Mishra, RK and Chandra, N and Chakravortty, D (2023) Salmonella Typhimurium PgtE is an essential arsenal to defend against the host resident antimicrobial peptides. In: Microbiological Research, 271 .

Chatterjee, Ritika and Shreenivas, Meghanashree M and Sunil, Rohith and Chakravortty, Dipshikha (2019) Enteropathogens: Tuning Their Gene Expression for Hassle-Free Survival. In: FRONTIERS IN MICROBIOLOGY, 9 .

Chatterjee, S and Sakorikar, T and Bs, A and Joshi, RK and Sikaria, A and Jayachandra, M and Vikas, V and Pandya, HJ (2022) A flexible implantable microelectrode array for recording electrocorticography signals from rodents. In: Biomedical Microdevices, 24 (4).

Chatterjee, Subhomoy and Kobylinski, Sabine and Basu, Bikramjit (2018) Finite Element Analysis to Probe the Influence of Acetabular Shell Design, Liner Material, and Subject Parameters on Biomechanical Response in Periprosthetic Bone. In: JOURNAL OF BIOMECHANICAL ENGINEERING-TRANSACTIONS OF THE ASME, 140 (10).

Chatterjee, Suman and Saxena, Mansi and Padmanabhan, Deepak and Jayachandra, Mahesh and Pandya, Hardik J (2019) Futuristic medical implants using bioresorbable materials and devices. In: BIOSENSORS & BIOELECTRONICS, 142 .

Chattopadhyay, A and Joseph, JP and Jagdish, S and Chaudhuri, S and Ramteke, NS and Karhale, AK and Waturuocha, U and Saini, DK and Nandi, D (2023) High throughput screening identifies auranofin and pentamidine as potent compounds that lower IFN-γ-induced Nitric Oxide and inflammatory responses in mice: DSS-induced colitis and Salmonella Typhimurium-induced sepsis. In: International Immunopharmacology, 122 .

Chaudhuri, Debalina and Chowdhury, Atish Roy and Biswas, Biswendu and Chakrayortty, Dipshikha (2018) Salmonella Typhimurium Infection Leads to Colonization of the Mouse Brain and Is Not Completely Cured With Antibiotics. In: FRONTIERS IN MICROBIOLOGY, 9 .

Chauhan, A and Mittal, M and Toley, BJ (2022) In situ synthesis of reagents in paper-based analytical devices using paper stacking. In: Analytical Methods .

Chauhan, L and Ram, U and Hari, K and Jolly, MK (2021) Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer. In: eLife, 10 .

Chawla, Manbeena and Mishra, Saurabh and Anand, Kushi and Parikh, Pankti and Mehta, Mansi and Vij, Manika and Verma, Taru and Singh, Parul and Jakkala, Kishor and Verma, HN and AjitKumar, Parthasarathi and Ganguli, Munia and Seshasayee, Aswin Sai Narain and Singh, Amit (2018) Redox-dependent condensation of the mycobacterial nucleoid by WhiB4. In: REDOX BIOLOGY, 19 . pp. 116-133.

Chedere, A and Hari, K and Kumar, S and Rangarajan, A and Jolly, MK (2021) Multi-stability and consequent phenotypic plasticity in AMPK-Akt double negative feedback loop in cancer cells. In: Journal of Clinical Medicine, 10 (3). pp. 1-16.

Cheerla, R and Ayappa, KG (2020) Molecular Dynamics Study of Lipid and Cholesterol Reorganization Due to Membrane Binding and Pore Formation by Listeriolysin O. In: Journal of Membrane Biology .

Cheng, Y-C and Zhang, Y and Tripathi, S and Harshavardhan, BV and Jolly, MK and Schiebinger, G and Levine, H and McDonald, TO and Michor, F (2024) Reconstruction of single-cell lineage trajectories and identification of diversity in fates during the epithelial-to- mesenchymal transition. In: Proceedings of the National Academy of Sciences of the United States of America, 121 (32).

Chhajer, H and Rizvi, VA and Roy, R (2021) Life cycle process dependencies of positive-sense RNA viruses suggest strategies for inhibiting productive cellular infection. In: Journal of the Royal Society Interface, 18 (184).

Chhajer, H and Roy, R (2024) Rationalised experiment design for parameter estimation with sensitivity clustering. In: Scientific Reports, 14 (1).

Choudhury, S and Ananthanarayanan, V and Ayappa, KG (2022) Coupling of mitochondrial population evolution to microtubule dynamics in fission yeast cells: a kinetic Monte Carlo study. In: Soft Matter, 18 . pp. 4483-4492.

Choudhury, S and Asthana, S and Homer-Vanniasinkam, S and Chatterjee, K (2022) Emerging trends in biliary stents: a materials and manufacturing perspective. In: Biomaterials Science, 10 (14). pp. 3716-3729.

Choudhury, S and Joshi, A and Baghel, VS and Ananthasuresh, GK and Asthana, S and Homer-Vanniasinkam, S and Chatterjee, K (2024) Design-encoded dual shape-morphing and shape-memory in 4D printed polymer parts toward cellularized vascular grafts. In: Journal of Materials Chemistry B .

Chowdhury, S and Jain, N and Waidi, YO and Barua, R and Das, S and Prasad, A and Datta, S (2024) Biological Smart Biomaterials: Materials for Biomedical Applications. [Book Chapter]

Chowdhury, SR and Keshavan, N and Basu, B (2021) Urinary bladder and urethral tissue engineering, and 3D bioprinting approaches for urological reconstruction. In: Journal of Materials Research .

Culig, Z and Jolly, MK and Souček, K (2023) Editorial: Heterogeneity and plasticity of prostate cancer. In: Frontiers in Molecular Biosciences, 10 .

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Das Ghosh, Lopamudra and Hasan, Jafar and Jain, Aditi and Sundaresan, Nagalingam R and Chatterjee, Kaushik (2019) A nanopillar array on black titanium prepared by reactive ion etching augments cardiomyogenic commitment of stem cells. In: NANOSCALE, 11 (43). pp. 20766-20776.

Dasgupta, D and Pally, D and Saini, DK and Bhat, R and Ghosh, A (2020) Nanomotors Sense Local Physicochemical Heterogeneities in Tumor Microenvironments**. In: Angewandte Chemie - International Edition .

Dasgupta, Debayan and Peddi, Shanmukh and Saini, Deepak Kumar and Ghosh, Ambarish (2022) Mobile Nanobots for Prevention of Root Canal Treatment Failure. In: Advanced Healthcare Materials . ISSN 2192-2640

Dasgupta, Queeny and Madras, Giridhar and Chatterjee, Kaushik (2019) Biodegradable polyol-based polymers for biomedical applications. In: INTERNATIONAL MATERIALS REVIEWS, 64 (5). pp. 288-309.

Dasgupta, Queeny and Madras, Giridhar and Chatterjee, Kaushik (2019) Gradient platform for combinatorial screening of thermoset polymers for biomedical applications. In: MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS, 94 . pp. 766-777.

Datey, A and Gopalan, J and Chakravortty, D (2021) Needleless or noninvasive delivery technology. [Book Chapter]

Datey, Akshay and Chakravortty, Dipshikha and Gopalan, Jagadeesh (2018) An overview of a novel use of shockwaves to alter cell permeability Comment on ``Shock wave-induced permeabilization of mammalian cells'' by Luz M. Lopez-Marin et al. In: PHYSICS OF LIFE REVIEWS, 26-27 . pp. 51-52.

Datey, Akshay and Shreenivas, Meghanashree and Chandrasekharan, Giridhar and Joseph, Jeswin and Sah, Shivjee and Aluri, Srinivas and Saha, Sankhanil and Varshney, Umesh and Chakravortty, Dipshikha (2018) Rewiring of one carbon metabolism in Salmonella serves as an excellent live vaccine against systemic salmonellosis. In: VACCINE, 36 (50). pp. 7715-7727.

Datey, Akshay and Thaha, C S Adeeb and Patil, Sudhir R and Gopalan, Jagadeesh and Chakravortty, Dipshikha (2019) Shockwave Therapy Efficiently Cures Multispecies Chronic Periodontitis in a Humanized Rat Model. In: FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 7 .

Dave, Pratik and George, Biju and Balakrishnan, Sreenath and Sharma, Divya Khandige and Raheja, Harsha and Dixit, Narendra M and Das, Saumitra (2019) Strand-specific affinity of host factor hnRNP C1/C2 guides positive to negative-strand ratio in Coxsackievirus B3 infection. In: RNA BIOLOGY, 16 (9). pp. 1286-1299.

De, Tamasa and Goyal, Shina and Balachander, Gowri and Chatterjee, Kaushik and Kumar, Prashant and Babu, Govind K and Rangarajan, Annapoorni (2019) A Novel Ex Vivo System Using 3D Polymer Scaffold to Culture Circulating Tumor Cells from Breast Cancer Patients Exhibits Dynamic E-M Phenotypes. In: JOURNAL OF CLINICAL MEDICINE, 8 (9).

Deb, S and Bhandary, S and Sinha, SK and Jolly, MK and Dutta, PS (2022) Identifying critical transitions in complex diseases. In: Journal of Biosciences, 47 (2).

Deng, Y and Chakraborty, P and Jolly, MK and Levine, H (2021) A theoretical approach to coupling the epithelial-mesenchymal transition (Emt) to extracellular matrix (ecm) stiffness via loxl2. In: Cancers, 13 (7).

Deshmukh, AP and Vasaikar, SV and Tomczak, K and Tripathi, S and Den Hollander, P and Arslan, E and Chakraborty, P and Soundararajan, R and Jolly, MK and Rai, K and Levine, H and Mani, SA (2021) Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencing. In: Proceedings of the National Academy of Sciences of the United States of America, 118 (19).

Desikan, R and Antia, R and Dixit, NM (2021) Physical �strength� of the multi-protein chain connecting immune cells: Does the weakest link limit antibody affinity maturation?: The weakest link in the multi-protein chain facilitating antigen acquisition by B cells in germinal centres limits antibody affinity maturation. In: BioEssays . (In Press)

Desikan, R and Behera, A and Maiti, PK and Ayappa, KG (2021) Using multiscale molecular dynamics simulations to obtain insights into pore forming toxin mechanisms. [Book Chapter]

Desikan, R and Maiti, PK and Ayappa, KG (2020) Predicting interfacial hot-spot residues that stabilize protein-protein interfaces in oligomeric membrane-toxin pores through hydrogen bonds and salt bridges. In: Journal of Biomolecular Structure and Dynamics .

Desikan, R and Padmanabhan, PK and Ganapathy Ayappa, K (2020) Opening of smaller toxin pores by lipid micelle formation. In: Proceedings of the National Academy of Sciences of the United States of America, 117 (10). pp. 5107-5108.

Desikan, R and Raja, R and Dixit, NM (2020) Early exposure to broadly neutralizing antibodies may trigger a dynamical switch from progressive disease to lasting control of SHIV infection. In: PLoS computational biology, 16 (8). e1008064.

Dhadve, AC and Hari, K and Rekhi, B and Jolly, MK and De, A and Ray, P (2020) Decoding molecular interplay between RUNX1 and FOXO3a underlying the pulsatile IGF1R expression during acquirement of chemoresistance. In: Biochimica et Biophysica Acta - Molecular Basis of Disease, 1866 (6).

Dhanabalan, KM and Gupta, VK and Agarwal, R (2020) Rapamycin-PLGA microparticles prevent senescence, sustain cartilage matrix production under stress and exhibit prolonged retention in mouse joints. In: Biomaterials science, 8 (15). pp. 4308-4321.

Dhanabalan, KM and Padhan, B and Dravid, AA and Agarwal, S and Pancheri, NM and Lin, A and Willet, NJ and Padmanabhan, AK and Agarwal, R (2024) Nordihydroguaiaretic acid microparticles are effective in the treatment of osteoarthritis. In: Journal of Materials Chemistry B .

Dhanabalan, Kaamini M and Dravid, Ameya A and Agarwal, Smriti and Sharath, Ramanath K and Padmanabhan, Ashok Kumar and Agarwal, Rachit (2022) Intra‐articular injection of rapamycin microparticles prevent senescence and effectively treat osteoarthritis. In: Bioengineering & Translational Medicine . ISSN 2380-6761

Dhar, D and Dey, T and Samim, MM and Padmanabha, H and Chatterjee, A and Naznin, P and Chandra, SR and Mallesh, K and Shah, R and Siddiqui, S and Pratik, K and Ameya, P and Abhishek, G (2021) Systemic inflammatory syndrome in COVID-19�SISCoV study: systematic review and meta-analysis. In: Pediatric Research .

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Dravid, AA and Dhanabalan, KM and Naskar, S and Vashistha, A and Agarwal, S and Padhan, B and Dewani, M and Agarwal, R (2023) Sustained release resolvin D1 liposomes are effective in the treatment of osteoarthritis in obese mice. In: Journal of Biomedical Materials Research - Part A .

Dravid, AA and M Dhanabalan, K and Agarwal, S and Agarwal, R (2021) Resolvin D1-loaded nanoliposomes promote M2 macrophage polarization and are effective in the treatment of osteoarthritis. In: Bioengineering and Translational Medicine .

Dsouza, Andrea and Jangam, Saylee and Soni, Shruti and Agarwal, Priyanka and Naik, Vishwanath and Manjula, J and Nair, Chandrasekhar B and Toley, Bhushan J (2022) A large-volume sputum dry storage and transportation device for molecular and culture-based diagnosis of tuberculosis. In: Lab on a Chip, 22 (9). pp. 1736-1747. ISSN 1473-0197

Duddu, AS and Sahoo, S and Hati, S and Jhunjhunwala, S and Jolly, MK (2020) Multi-stability in cellular differentiation enabled by a network of three mutually repressing master regulators: Multi-stability in cellular differentiation enabled by a network of three mutually repressing master regulators. In: Journal of the Royal Society Interface, 17 (170).

da Silva, AS and Romaguera-Barcelay, Y and Matos, RS and Das, A and Gandarilla, A and Brito, WR and da Fonseca Filho, HD (2024) Influence of calcination temperature on the 3D nanoscale topography of LaMnO3 thin films: A comprehensive surface analysis. In: Ceramics International .

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Eapen, Mathew Suji and Hansbro, Philip M and Larssona-Callerfelt, Anna-Karin and Jolly, Mohit K and Myers, Stephen and Sharma, Pawan and Jones, Bernadette and Rahman, Md Atiqur and Markos, James and Chia, Collin and Larby, Josie and Haug, Greg and Hardikar, Ashutosh and Weber, Heinrich C and Mabeza, George and Cavalheri, Vinicius and Khor, Yet H and McDonald, Christine F and Sohal, Sukhwinder Singh (2018) Chronic Obstructive Pulmonary Disease and Lung Cancer: Underlying Pathophysiology and New Therapeutic Modalities. In: DRUGS, 78 (16). pp. 1717-1740.

El Meouche, I and Jain, P and Jolly, MK and Capp, J-P (2024) Drug tolerance and persistence in bacteria, fungi and cancer cells: Role of non-genetic heterogeneity. In: Translational Oncology, 49 .

Espinoza, B and Adiga, A and Venkatramanan, S and Warren, AS and Chen, J and Lewis, BL and Vullikanti, A and Swarup, S and Moon, S and Barrett, CL and Athreya, S and Sundaresan, R and Chandru, V and Laxminarayan, R and Schaffer, B and Poor, HV and Levin, SA and Marathe, MV (2023) Coupled models of genomic surveillance and evolving pandemics with applications for timely public health interventions. In: Proceedings of the National Academy of Sciences of the United States of America, 120 (48).

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Fenton, Owen S and Tibbitt, Mark W and Appel, Eric A and Jhunjhunwala, Siddharth and Webber, Matthew J and Langer, Robert (2019) Injectable Polymer-Nanoparticle Hydrogels for Local Immune Cell Recruitment. In: BIOMACROMOLECULES, 20 (12). pp. 4430-4436.

Fernandes, SE and Alakesh, A and Rajmani, RS and Jhunjhunwala, S and Saini, DK (2021) Aging associated altered response to intracellular bacterial infections and its implication on the host. In: Biochimica et Biophysica Acta - Molecular Cell Research, 1868 (9).

Fernandes, SE and Saini, DK (2021) The ERK-p38MAPK-STAT3 Signalling Axis Regulates iNOS Expression and Salmonella Infection in Senescent Cells. In: Frontiers in Cellular and Infection Microbiology, 11 .

Foo, J and Basanta, D and Rockne, RC and Strelez, C and Shah, C and Ghaffarian, K and Mumenthaler, SM and Mitchell, K and Lathia, JD and Frankhouser, D and Branciamore, S and Kuo, Y-H and Marcucci, G and Velde, RV and Marusyk, A and Huang, S and Hari, K and Jolly, MK and Hatzikirou, H and Poels, KE and Spilker, ME and Shtylla, B and Robertson-Tessi, M and Anderson, ARA (2022) Roadmap on plasticity and epigenetics in cancer. In: Physical Biology, 19 (3).

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G K, AV and Gogoi, G and Behera, B and Rila, S and Rangarajan, A and Pandya, HJ (2022) RapidET: a MEMS-based platform for label-free and rapid demarcation of tumors from normal breast biopsy tissues. In: Microsystems and Nanoengineering, 8 (1).

G K, AV and Gogoi, G and Kachappilly, MC and Rangarajan, A and Pandya, HJ (2023) Label-free multimodal electro-thermo-mechanical (ETM) phenotyping as a novel biomarker to differentiate between normal, benign, and cancerous breast biopsy tissues. In: Journal of Biological Engineering, 17 (1).

Ganapathy, Aparna and Mishra, Avshesh and Soni, Megha Rani and Kumar, Priyanka and Sadagopan, Mukunth and Kanthi, Anil Vittal and Patric, Irene Rosetta Pia and George, Sobha and Sridharan, Aparajit and Thyagarajan, T C and Aswathy, S L and Vidya, H K and Chinnappa, Swathi M and Nayanala, Swetha and Prakash, Manasa B and Raghavendrachar, Vijayashree G and Parulekar, Minothi and Gowda, Vykuntaraju K and Nampoothiri, Sheela and Menon, Ramshekhar N and Pachat, Divya and Udani, Vrajesh and Naik, Neeta and Kamate, Mahesh and Devi, A Radha Rama and Kunju, P A Mohammed and Nair, Mohandas and Hegde, Anaita Udwadia and Kumar, M. Pradeep and Sundaram, Soumya and Tilak, Preetha and Puri, Ratna D and Shah, Krati and Sheth, Jayesh and Hasan, Qurratulain and Sheth, Frenny and Agrawal, Pooja and Katragadda, Shanmukh and Veeramachaneni, Vamsi and Chandru, Vijay and Hariharanu, Ramesh and Manna, Ashraf U (2019) Multi-gene testing in neurological disorders showed an improved diagnostic yield: data from over 1000 Indian patients. In: JOURNAL OF NEUROLOGY, 266 (8). pp. 1919-1926.

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Garg, Amar K and Desikan, Rajat and Dixit, Narendra M (2019) Preferential Presentation of High-Affinity Immune Complexes in Germinal Centers Can Explain How Passive Immunization Improves the Humoral Response. In: CELL REPORTS, 29 (12). 3946+.

George, E and Goswami, A and Lodhiya, T and Padwal, P and Iyer, S and Gauttam, I and Sethi, L and Jeyasankar, S and Sharma, PR and Dravid, AA and Mukherjee, R and Agarwal, R (2022) Immunomodulatory effect of mycobacterial outer membrane vesicles coated nanoparticles. In: Biomaterials Advances, 139 .

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Ghosh, Lopamudra Das and Ravi, Venkatraman and Jain, Aditi and Panicker, Arpana G and Sundaresan, Nagalingam R and Chatterjee, Kaushik (2019) Sirtuin 6 mediated stem cell cardiomyogenesis on protein coated nanofibrous scaffolds. In: NANOMEDICINE-NANOTECHNOLOGY BIOLOGY AND MEDICINE, 19 . pp. 145-155.

Ghoshal, B and Chakraborty, D and Nag, M and Varadarajan, R and Jhunjhunwala, S (2024) Ex Vivo Delivery of mRNA to Immune Cells via a Nonendosomal Route Obviates the Need for Nucleoside Modification. In: ACS Bio and Med Chem Au .

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Gogoi, M and Karmakar, K and Chandra, K and Chakravortty, D (2017) Methylglyoxal and other AGEs: Good and bad dual role in the body. [Book Chapter]

Gogoi, Mayuri and Chandra, Kasturi and Sarikhani, Mohsen and Ramani, Ramya and Sundaresan, Nagalingam Ravi and Chakravortty, Dipshikha (2018) Salmonella escapes adaptive immune response via SIRT2 mediated modulation of innate immune response in dendritic cells. In: PLOS PATHOGENS, 14 (11).

Gogoi, Mayuri and Shreenivas, Meghanashree M and Chakravortty, Dipshikha (2018) Hoodwinking the Big-Eater to Prosper: The Salmonella-Macrophage Paradigm. In: JOURNAL OF INNATE IMMUNITY, 11 (3). pp. 289-299.

Gorai, B and Sahoo, AK and Srivastava, A and Dixit, NM and Maiti, PK (2021) Concerted interactions between multiple gp41 trimers and the target cell lipidome may be required for HIV-1 entry. In: Journal of Chemical Information and Modeling . (In Press)

Goswami, A and Sharma, PR and Agarwal, R (2021) Combatting intracellular pathogens using bacteriophage delivery. In: Critical Reviews in Microbiology, 47 (4). pp. 461-478.

Goswami, S and Ramachandran, RV and Bhat, R and Dasgupta, D and Barman, A and Saini, DK and Ghosh, A (2022) Evidence for the Successful Manipulation of a Magnetic Nanorobot Inside the Hard Tumor of a Live Animal. In: 2022 IEEE International Conference on Emerging Electronics, 11- 14 Dec 2022, Bangalore.

Gupta, K and Mathew, AB and Chakrapani, H and Saini, DK (2023) H2S contributed from CSE during cellular senescence suppresses inflammation and nitrosative stress. In: Biochimica et Biophysica Acta - Molecular Cell Research, 1870 (2).

Guttapadu, R and Prakash, N and M, A and Chatterjee, R and S, M and M, J and Sastry, UM and Subramanyam, JR and Chakravortty, D and R, KS and Chandra, N (2023) Profiling system-wide variations and similarities between Rheumatic Heart Disease and Acute Rheumatic Fever–A pilot analysis. In: PLoS neglected tropical diseases, 17 (4). e0011263.

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Hadagalli, K and Kumar, R and Mandal, S and Basu, B (2020) Structural, compositional and spectral investigation of prawn exoskeleton nanocomposite: UV protection from mycosporine-like amino acids. In: Materials Chemistry and Physics, 249 .

Hadagalli, K and Panda, AK and Mandal, S and Basu, B (2019) Faster Biomineralization and Tailored Mechanical Properties of Marine-Resource-Derived Hydroxyapatite Scaffolds with Tunable Interconnected Porous Architecture. In: ACS Applied Bio Materials, 2 (5). pp. 2171-2184.

Hadagalli, K and Shenoy, S and Shakya, KR and Manjunath, G and Tarafder, K and Mandal, S and Basu, B (2020) Effect of Fe3+ substitution on the structural modification and band structure modulated UV absorption of hydroxyapatite. In: International Journal of Applied Ceramic Technology . (In Press)

Hajra, D and Datey, A and Chakravortty, D (2020) Attenuation methods for live vaccines. [Book Chapter]

Hari, K and Duncan, W and Ibrahim, MA and Jolly, MK and Cummins, B and Gedeon, T (2023) Assessing biological network dynamics: comparing numerical simulations with analytical decomposition of parameter space. In: npj Systems Biology and Applications, 9 (1).

Hari, K and Harlapur, P and Gopalan, A and Ullanat, V and Duddu, AS and Jolly, MK (2022) Emergent properties of coupled bistable switches. In: Journal of Biosciences, 47 (4).

Hari, K and Sabuwala, B and Subramani, BV and La Porta, CAM and Zapperi, S and Font-Clos, F and Jolly, MK (2020) Identifying inhibitors of epithelial–mesenchymal plasticity using a network topology-based approach. In: npj Systems Biology and Applications, 6 (1).

Hariharan, VN and Yadav, R and Thakur, C and Singh, A and Gopinathan, R and Singh, DP and Sankhe, G and Malhotra, V and Chandra, N and Bhatt, A and Saini, DK (2021) Cyclic di-GMP sensing histidine kinase PdtaS controls mycobacterial adaptation to carbon sources. In: FASEB Journal, 35 (4).

Harlapur, P and Duddu, AS and Hari, K and Kulkarni, P and Jolly, MK (2022) Functional Resilience of Mutually Repressing Motifs Embedded in Larger Networks. In: Biomolecules, 12 (12).

Hati, S and Duddu, AS and Jolly, MK (2021) Operating principles of circular toggle polygons. In: Physical Biology, 18 (4).

Hedrich, V and Breitenecker, K and Ortmayr, G and Pupp, F and Huber, H and Chen, D and Sahoo, S and Jolly, MK and Mikulits, W (2023) PRAME Is a Novel Target of Tumor-Intrinsic Gas6/Axl Activation and Promotes Cancer Cell Invasion in Hepatocellular Carcinoma. In: Cancers, 15 (9).

Hewelt, Blake and Li, Haiqing and Jolly, Mohit Kumar and Kulkarni, Prakash and Mambetsariev, Ise and Salgia, Ravi (2019) The DNA walk and its demonstration of deterministic chaos-relevance to genomic alterations in lung cancer. In: BIOINFORMATICS, 35 (16). pp. 2738-2748.

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Ilangumaran Ponmalar, I and Ayappa, KG and Basu, JK (2021) Bacterial protein listeriolysin O induces nonmonotonic dynamics because of lipid ejection and crowding. In: Biophysical Journal, 120 (15). pp. 3040-3049.

Ilangumaran Ponmalar, I and Sarangi, NK and Basu, JK and Ayappa, KG (2021) Pore Forming Protein Induced Biomembrane Reorganization and Dynamics: A Focused Review. In: Frontiers in Molecular Biosciences, 8 .

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Iyer, A and Gupta, K and Sharma, S and Hari, K and Lee, YF and Ramalingam, N and Yap, YS and West, J and Bhagat, AA and Subramani, BV and Sabuwala, B and Tan, TZ and Thiery, JP and Jolly, MK and Ramalingam, N and Sengupta, D (2021) Integrative analysis and machine learning based characterization of single circulating tumor cells. In: Journal of Clinical Medicine, 9 (4). pp. 1-2.

Iyer, S and Yadav, R and Agarwal, S and Tripathi, S and Agarwal, R (2022) Bioengineering Strategies for Developing Vaccines against Respiratory Viral Diseases. In: Clinical microbiology reviews, 35 (1). e0012321.

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Jagdish, AK and Kumar, MP and Sandeep, BS and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2018) Hierarchical structures and multiscale optical coupling for improved photodetectors. In: 4th IEEE International Conference on Emerging Electronics, ICEE 2018, 17-19 December 2018, Bengaluru.

Jagdish, AK and Luke, Sibimol and Garg, Kavita and Ramamurthy, Praveen C and Mahapatra, D Roy and Hegde, Gopalkrishna (2019) Light trapping in photovoltaic devices with weak dielectric absorbers: Nanostructured dielectric and metal interfaces. In: OPTICAL MATERIALS, 89 . pp. 288-294.

Jagtap, S and K, R and Valloly, P and Sharma, R and Maurya, S and Gaigore, A and Ardhya, C and Biligi, DS and Desiraju, BK and Natchu, UCM and Saini, DK and Roy, R (2021) Evaluation of spike protein antigens for SARS-CoV-2 serology. In: Journal of Virological Methods, 296 .

Jain, A and Behera, M and Mahapatra, C and Sundaresan, NR and Chatterjee, K (2021) Nanostructured polymer scaffold decorated with cerium oxide nanoparticles toward engineering an antioxidant and anti-hypertrophic cardiac patch. In: Materials Science and Engineering C, 118 .

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Jia, D and Park, JH and Kaur, H and Jung, KH and Yang, S and Tripathi, S and Galbraith, M and Deng, Y and Jolly, MK and Kaipparettu, BA and Onuchic, JN and Levine, H (2021) Towards decoding the coupled decision-making of metabolism and epithelial-to-mesenchymal transition in cancer. In: British Journal of Cancer .

Jia, Dongya and George, Jason T and Tripathi, Satyendra C and Kundnani, Deepali L and Lu, Mingyang and Hanash, Samir M and Onuchic, Jose N and Jolly, Mohit Kumar and Levine, Herbert (2019) Testing the gene expression classification of the EMT spectrum. In: PHYSICAL BIOLOGY, 16 (2).

Jia, Dongya and Li, Xuefei and Bocci, Federico and Tripathi, Shubham and Deng, Youyuan and Jolly, Mohit Kumar and Onuchic, Jose N and Levine, Herbert (2019) Quantifying Cancer Epithelial-Mesenchymal Plasticity and its Association with Stemness and Immune Response. In: JOURNAL OF CLINICAL MEDICINE, 8 (5).

Jia, W and Duddu, AS and Jolly, MK and Levine, H (2022) Lack of Correlation between Landscape Geometry and Transition Rates. In: Journal of Physical Chemistry B, 126 (30). pp. 5613-5618.

Jia, W and Jolly, MK and Levine, H (2022) NRF2-dependent Epigenetic Regulation can Promote the Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Cell and Developmental Biology, 9 .

Jia, Wen and Deshmukh, Abhijeet and Mani, Sendurai A and Jolly, Mohit Kumar and Levine, Herbert (2019) A possible role for epigenetic feedback regulation in the dynamics of the epithelial-mesenchymal transition (EMT). In: PHYSICAL BIOLOGY, 16 (6).

Jindal, R and Nanda, A and Pillai, M and Ware, KE and Singh, D and Sehgal, M and Armstrong, AJ and Somarelli, JA and Jolly, MK (2023) Emergent dynamics of underlying regulatory network links EMT and androgen receptor-dependent resistance in prostate cancer. In: Computational and Structural Biotechnology Journal, 21 . 1498 – 1509.

Johnson, Christopher T and Wroe, James A and Agarwal, Rachit and Martin, Karen E and Guldberg, Robert E and Donlan, Rodney M and Westblade, Lars F and Garcia, Andres J (2018) Hydrogel delivery of lysostaphin eliminates orthopedic implant infection by Staphylococcus aureus and supports fracture healing. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115 (22). E4960-E4969.

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Jolly, MK and Roy, S (2022) Editorial: Topical Collection on Emergent Dynamics of Biological Networks. In: Journal of Biosciences, 47 (4).

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Jolly, Mohit Kumar and Celià-Terrassa, Toni (2019) Dynamics of Phenotypic Heterogeneity Associated with EMT and Stemness during Cancer Progression. In: Journal of Clinical Medicine, 8 (10). p. 1542. ISSN 2077-0383

Joshi, A and Choudhury, S and Baghel, VS and Ghosh, S and Gupta, S and Lahiri, D and Ananthasuresh, GK and Chatterjee, K (2023) 4D Printed Programmable Shape-Morphing Hydrogels as Intraoperative Self-Folding Nerve Conduits for Sutureless Neurorrhaphy. In: Advanced Healthcare Materials .

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Diwan, A and Dixon, IMC and Djavaheri-Mergny, M and Dobrinski, I and Dobrovinskaya, O and Dobrowolski, R and Dobson, RCJ and Ä�okiÄ�, J and Dokmeci Emre, S and Donadelli, M and Dong, B and Dong, X and Dong, Z and Dorn II, GW and Dotsch, V and Dou, H and Dou, J and Dowaidar, M and Dridi, S and Drucker, L and Du, A and Du, C and Du, G and Du, H-N and Du, L-L and du Toit, A and Duan, S-B and Duan, X and Duarte, SP and Dubrovska, A and Dunlop, EA and Dupont, N and Durán, RV and Dwarakanath, BS and Dyshlovoy, SA and Ebrahimi-Fakhari, D and Eckhart, L and Edelstein, CL and Efferth, T and Eftekharpour, E and Eichinger, L and Eid, N and Eisenberg, T and Eissa, NT and Eissa, S and Ejarque, M and El Andaloussi, A and El-Hage, N and El-Naggar, S and Eleuteri, AM and El-Shafey, ES and Elgendy, M and Eliopoulos, AG and Elizalde, MM and Elks, PM and Elsasser, H-P and Elsherbiny, ES and Emerling, BM and Emre, NCT and Eng, CH and Engedal, N and Engelbrecht, A-M and Engelsen, AST and Enserink, JM and Escalante, R and Esclatine, A and Escobar-Henriques, M and Eskelinen, E-L and Espert, L and Eusebio, M-O and Fabrias, G and Fabrizi, C and Facchiano, A and Facchiano, F and Fadeel, B and Fader, C and Faesen, AC and Fairlie, WD and Falcó, A and Falkenburger, BH and Fan, D and Fan, J and Fan, Y and Fang, EF and Fang, Y and Fang, Y and Fanto, M and Farfel-Becker, T and Faure, M and Fazeli, G and Fedele, AO and Feldman, AM and Feng, D and Feng, J and Feng, L and Feng, Y and Feng, Y and Feng, W and Fenz Araujo, T and Ferguson, TA and Fernández, Ã�F and Fernandez-Checa, JC and Fernández-Veledo, S and Fernie, AR and Ferrante, Jr and Ferraresi, A and Ferrari, MF and Ferreira, JCB and Ferro-Novick, S and Figueras, A and Filadi, R and Filigheddu, N and Filippi-Chiela, E and Filomeni, G and Fimia, GM and Fineschi, V and Finetti, F and Finkbeiner, S and Fisher, EA and Fisher, PB and Flamigni, F and Fliesler, SJ and Flo, TH and Florance, I and Florey, O and Florio, T and Fodor, E and Follo, C and Fon, EA and Forlino, A and Fornai, F and Fortini, P and Fracassi, A and Fraldi, A and Franco, B and Franco, R and Franconi, F and Frankel, LB and Friedman, SL and Fröhlich, LF and Frühbeck, G and Fuentes, JM and Fujiki, Y and Fujita, N and Fujiwara, Y and Fukuda, M and Fulda, S and Furic, L and Furuya, N and Fusco, C and Gack, MU and Gaffke, L and Galadari, S and Galasso, A and Galindo, MF and Gallolu Kankanamalage, S and Galluzzi, L and Galy, V and Gammoh, N and Gan, B and Ganley, IG and Gao, F and Gao, H and Gao, M and Gao, P and Gao, S-J and Gao, W and Gao, X and Garcera, A and Garcia, MN and Garcia, VE and García-Del Portillo, F and Garcia-Escudero, V and Garcia-Garcia, A and Garcia-Macia, M and García-Moreno, D and Garcia-Ruiz, C and García-Sanz, P and Garg, AD and Gargini, R and Garofalo, T and Garry, RF and Gassen, NC and Gatica, D and Ge, L and Ge, W and Geiss-Friedlander, R and Gelfi, C and Genschik, P and Gentle, IE and Gerbino, V and Gerhardt, C and Germain, K and Germain, M and Gewirtz, DA and Ghasemipour Afshar, E and Ghavami, S and Ghigo, A and Ghosh, M and Giamas, G and Giampietri, C and Giatromanolaki, A and Gibson, GE and Gibson, SB and Ginet, V and Giniger, E and Giorgi, C and Girao, H and Girardin, SE and Giridharan, M and Giuliano, S and Giulivi, C and Giuriato, S and Giustiniani, J and Gluschko, A and Goder, V and Goginashvili, A and Golab, J and Goldstone, DC and Golebiewska, A and Gomes, LR and Gomez, R and Gómez-Sánchez, R and Gomez-Puerto, MC and Gomez-Sintes, R and Gong, Q and Goni, FM and González-Gallego, J and Gonzalez-Hernandez, T and Gonzalez-Polo, RA and Gonzalez-Reyes, JA and González-Rodríguez, P and Goping, IS and Gorbatyuk, MS and Gorbunov, NV and Görgülü, K and Gorojod, RM and Gorski, SM and Goruppi, S and Gotor, C and Gottlieb, RA and Gozes, I and Gozuacik, D and Graef, M and Gräler, MH and Granatiero, V and Grasso, D and Gray, JP and Green, DR and Greenhough, A and Gregory, SL and Griffin, EF and Grinstaff, MW and Gros, F and Grose, C and Gross, AS and Gruber, F and Grumati, P and Grune, T and Gu, X and Guan, J-L and Guardia, CM and Guda, K and Guerra, F and Guerri, C and Guha, P and Guillén, C and Gujar, S and Gukovskaya, A and Gukovsky, I and Gunst, J and Günther, A and Guntur, AR and Guo, C and Guo, C and Guo, H and Guo, L-W and Guo, M and Gupta, P and Gupta, SK and Gupta, S and Gupta, VB and Gupta, V and Gustafsson, AB and Gutterman, DD and HB, R and Haapasalo, A and Haber, JE and HaÄ�, A and Hadano, S and Hafrén, AJ and Haidar, M and Hall, BS and Halldén, G and Hamacher-Brady, A and Hamann, A and Hamasaki, M and Han, W and Hansen, M and Hanson, PI and Hao, Z and Harada, M and Harhaji-Trajkovic, L and Hariharan, N and Haroon, N and Harris, J and Hasegawa, T and Hasima Nagoor, N and Haspel, JA and Haucke, V and Hawkins, WD and Hay, BA and Haynes, CM and Hayrabedyan, SB and Hays, TS and He, C and He, Q and He, R-R and He, Y-W and He, Y-Y and Heakal, Y and Heberle, AM and Hejtmancik, JF and Helgason, GV and Henkel, V and Herb, M and Hergovich, A and Herman-Antosiewicz, A and Hernández, A and Hernandez, C and Hernandez-Diaz, S and Hernandez-Gea, V and Herpin, A and Herreros, J and Hervás, JH and Hesselson, D and Hetz, C and Heussler, VT and Higuchi, Y and Hilfiker, S and Hill, JA and Hlavacek, WS and Ho, EA and Ho, IHT and Ho, PW-L and Ho, S-L and Ho, WY and Hobbs, GA and Hochstrasser, M and Hoet, PHM and Hofius, D and Hofman, P and Höhn, A and Holmberg, CI and Hombrebueno, JR and Yi-Ren Hong, C-WH and Hooper, LV and Hoppe, T and Horos, R and Hoshida, Y and Hsin, I-L and Hsu, H-Y and Hu, B and Hu, D and Hu, L-F and Hu, MC and Hu, R and Hu, W and Hu, Y-C and Hu, Z-W and Hua, F and Hua, J and Hua, Y and Huan, C and Huang, C and Huang, C and Huang, C and Huang, C and Huang, H and Huang, K and Huang, MLH and Huang, R and Huang, S and Huang, T and Huang, X and Huang, YJ and Huber, TB and Hubert, V and Hubner, CA and Hughes, SM and Hughes, WE and Humbert, M and Hummer, G and Hurley, JH and Hussain, S and Hussain, S and Hussey, PJ and Hutabarat, M and Hwang, H-Y and Hwang, S and Ieni, A and Ikeda, F and Imagawa, Y and Imai, Y and Imbriano, C and Imoto, M and Inman, DM and Inoki, K and Iovanna, J and Iozzo, RV and Ippolito, G and Irazoqui, JE and Iribarren, P and Ishaq, M and Ishikawa, M and Ishimwe, N and Isidoro, C and Ismail, N and Issazadeh-Navikas, S and Itakura, E and Ito, D and Ivankovic, D and Ivanova, S and Iyer, AKV and Izquierdo, JM and Izumi, M and Jäättelä, M and Jabir, MS and Jackson, WT and Jacobo-Herrera, N and Jacomin, A-C and Jacquin, E and Jadiya, P and Jaeschke, H and Jagannath, C and Jakobi, AJ and Jakobsson, J and Janji, B and Jansen-Dürr, P and Jansson, PJ and Jantsch, J and Januszewski, S and Jassey, A and Jean, S and Jeltsch-David, H and Jendelova, P and Jenny, A and Jensen, TE and Jessen, N and Jewell, JL and Ji, J and Jia, L and Jia, R and Jiang, L and Jiang, Q and Jiang, R and Jiang, T and Jiang, X and Jiang, Y and Jimenez-Sanchez, M and Jin, E-J and Jin, F and Jin, H and Jin, L and Jin, L and Jin, M and Jin, S and Jo, E-K and Joffre, C and Johansen, T and Johnson, GVW and Johnston, SA and Jokitalo, E and Jolly, MK and Joosten, LAB and Jordan, J and Joseph, B and Ju, D and Ju, J-S and Ju, J and Juárez, E and Judith, D and Juhász, G and Jun, Y and Jung, CH and Jung, S-C and Jung, YK and Jungbluth, H and Jungverdorben, J and Just, S and Kaarniranta, K and Kaasik, A and Kabuta, T and Kaganovich, D and Kahana, A and Kain, R and Kajimura, S and Kalamvoki, M and Kalia, M and Kalinowski, DS and Kaludercic, N and Kalvari, I and Kaminska, J and Kaminskyy, VO and Kanamori, H and Kanasaki, K and Kang, C and Kang, R and Kang, SS and Kaniyappan, S and Kanki, T and Kanneganti, T-D and Kanthasamy, AG and Kanthasamy, A and Kantorow, M and Kapuy, O and Karamouzis, MV and Karim, MR and Karmakar, P and Katare, RG and Kato, M and Kaufmann, SHE and Kauppinen, A and Kaushal, GP and Kaushik, S and Kawasaki, K and Kazan, K and Ke, P-Y and Keating, DJ and Keber, U and Kehrl, JH and Keller, KE and Keller, CW and Kemper, JK and Kenific, CM and Kepp, O and Kermorgant, S and Kern, A and Ketteler, R and Keulers, TG and Khalfin, B and Khalil, H and Khambu, B and Khan, SY and Khandelwal, VKM and Khandia, R and Kho, W and Khobrekar, NV and Khuansuwan, S and Khundadze, M and Killackey, SA and Kim, D and Kim, DR and Kim, D-H and Kim, D-E and Kim, EY and Kim, E-K and Kim, H-R and Kim, H-S and Kim, Hyung-Ryong and Kim, JH and Kim, JK and Kim, J-H and Kim, J and Kim, JH and Kim, KI and Kim, PK and Kim, S-J and Kimball, SR and Kimchi, A and Kimmelman, AC and Kimura, T and King, MA and Kinghorn, KJ and Kinsey, CG and Kirkin, V and Kirshenbaum, LA and Kiselev, SL and Kishi, S and Kitamoto, K and Kitaoka, Y and Kitazato, K and Kitsis, RN and Kittler, JT and Kjaerulff, O and Klein, PS and Klopstock, T and Klucken, J and Knævelsrud, H and Knorr, RL and Ko, BCB and Ko, F and Ko, J-L and Kobayashi, H and Kobayashi, S and Koch, I and Koch, JC and Koenig, U and Kögel, D and Koh, YH and Koike, M and Kohlwein, SD and Kocaturk, NM and Komatsu, M and König, J and Kono, T and Kopp, BT and Korcsmaros, T and Korkmaz, G and Korolchuk, VI and Korsnes, MS and Koskela, A and Kota, J and Kotake, Y and Kotler, ML and Kou, Y and Koukourakis, MI and Koustas, E and Kovacs, AL and Kovács, T and Koya, D and Kozako, T and Kraft, C and Krainc, D and Krämer, H and Krasnodembskaya, AD and Kretz-Remy, C and Kroemer, G and Ktistakis, NT and Kuchitsu, K and Kuenen, S and Kuerschner, L and Kukar, T and Kumar, A and Kumar, A and Kumar, D and Kumar, D and Kumar, S and Kume, S and Kumsta, C and Kundu, CN and Kundu, M and Kunnumakkara, AB and Kurgan, L and Kutateladze, TG and Kutlu, O and Kwak, S and Kwon, HJ and Kwon, TK and Kwon, YT and Kyrmizi, I and La Spada, A and Labonté, P and Ladoire, S and Laface, I and Lafont, F and Lagace, DC and Lahiri, V and Lai, Z and Laird, AS and Lakkaraju, A and Lamark, T and Lan, S-H and Landajuela, A and Lane, DJR and Lane, JD and Lang, CH and Lange, C and Langel, Ã� and Langer, R and Lapaquette, P and Laporte, J and LaRusso, NF and Lastres-Becker, I and Lau, WCY and Laurie, GW and Lavandero, S and Law, BYK and Law, HK-W and Layfield, R and Le, W and Le Stunff, H and Leary, AY and Lebrun, J-J and Leck, LYW and Leduc-Gaudet, J-P and Lee, C and Lee, C-P and Lee, D-H and Lee, EB and Lee, EF and Lee, GM and Lee, H-J and Lee, HK and Lee, JM and Lee, JS and Lee, J-A and Lee, J-Y and Lee, JH and Lee, M and Lee, MG and Lee, MJ and Lee, M-S and Lee, SY and Lee, S-J and Lee, SY and Lee, SB and Lee, WH and Lee, Y-R and Lee, Y-H and Lee, Y and Lefebvre, C and Legouis, R and Lei, YL and Lei, Y and Leikin, S and Leitinger, G and Lemus, L and Leng, S and Lenoir, O and Lenz, G and Lenz, HJ and Lenzi, P and León, Y and Leopoldino, AM and Leschczyk, C and Leskelä, S and Letellier, E and Leung, C-T and Leung, PS and Leventhal, JS and Levine, B and Lewis, PA and Ley, K and Li, B and Li, D-Q and Li, J and Li, J and Li, J and Li, K and Li, L and Li, M and Li, M and Li, M and Li, M and Li, M and Li, P-L and Li, M-Q and Li, Q and Li, S and Li, T and Li, W and Li, W and Li, X and Li, Y-P and Li, Y and Li, Z and Li, Z and Li, Z and Lian, J and Liang, C and Liang, Q and Liang, W and Liang, Y and Liang, Y and Liao, G and Liao, L and Liao, M and Liao, Y-F and Librizzi, M and Lie, PPY and Lilly, MA and Lim, HJ and Lima, TRR and Limana, F and Lin, C and Lin, C-W and Lin, D-S and Lin, F-C and Lin, JD and Lin, KM and Lin, K-H and Lin, L-T and Lin, P-H and Lin, Q and Lin, S and Lin, S-J and Lin, W and Lin, X and Lin, Y-X and Lin, Y-S and Linden, R and Lindner, P and Ling, S-C and Lingor, P and Linnemann, AK and Liou, Y-C and Lipinski, MM and LipovÅ¡ek, S and Lira, VA and Lisiak, N and Liton, PB and Liu, C and Liu, C-H and Liu, C-F and Liu, CH and Liu, F and Liu, H and Liu, H-S and Liu, H-F and Liu, H and Liu, J and Liu, J and Liu, J and Liu, L and Liu, L and Liu, M and Liu, Q and Liu, W and Liu, W and Liu, X-H and Liu, X and Liu, X and Liu, X and Liu, X and Liu, Y and Liu, Y and Liu, Y and Liu, Y and Liu, Y and Livingston, JA and Lizard, G and Lizcano, JM and Ljubojevic-Holzer, S and LLeonart, ME and Llobet-Navà s, D and Llorente, A and Lo, CH and Lobato-Márquez, D and Long, Q and Long, YC and Loos, B and Loos, JA and López, MG and López-Doménech, G and López-Guerrero, JA and López-Jiménez, AT and López-Pérez, Ã� and López-Valero, I and Lorenowicz, MJ and Lorente, M and Lorincz, P and Lossi, L and Lotersztajn, S and Lovat, PE and Lovell, JF and Lovy, A and LÅ�w, P and Lu, G and Lu, H and Lu, J-H and Lu, J-J and Lu, M and Lu, S and Luciani, A and Lucocq, JM and Ludovico, P and Luftig, MA and Luhr, M and Luis-Ravelo, D and Lum, JJ and Luna-Dulcey, L and Lund, AH and Lund, VK and Lünemann, JD and Lüningschrör, P and Luo, H and Luo, R and Luo, S and Luo, Z and Luparello, C and Lüscher, B and Luu, L and Lyakhovich, A and Lyamzaev, KG and Lystad, AH and Lytvynchuk, L and Ma, AC and Ma, C and Ma, M and Ma, N-F and Ma, Q-H and Ma, X and Ma, Y and Ma, Z and MacDougald, OA and Macian, F and MacIntosh, GC and MacKeigan, JP and Macleod, KF and Maday, S and Madeo, F and Madesh, M and Madl, T and Madrigal-Matute, J and Maeda, A and Maejima, Y and Magarinos, M and Mahavadi, P and Maiani, E and Maiese, K and Maiti, P and Maiuri, MC and Majello, B and Major, MB and Makareeva, E and Malik, F and Mallilankaraman, K and Malorni, W and Maloyan, A and Mammadova, N and Man, GCW and Manai, F and Mancias, JD and Mandelkow, E-M and Mandell, MA and Manfredi, AA and Manjili, MH and Manjithaya, R and Manque, P and Manshian, BB and Manzano, R and Manzoni, C and Mao, K and Marchese, C and Marchetti, S and Marconi, AM and Marcucci, F and Mardente, S and Mareninova, OA and Margeta, M and Mari, M and Marinelli, S and Marinelli, O and Mariño, G and Mariotto, S and Marshall, RS and Marten, MR and Martens, S and Martin, APJ and Martin, KR and Martin, S and Martin, S and Martín-Segura, A and Martín-Acebes, MA and Martin-Burriel, I and Martin-Rincon, M and Martin-Sanz, P and Martina, JA and Martinet, W and Martinez, A and Martinez, A and Martinez, J and Martinez Velazquez, M and Martinez-Lopez, N and Martinez-Vicente, M and Martins, DO and Martins, JO and Martins, WK and Martins-Marques, T and Marzetti, E and Masaldan, S and Masclaux-Daubresse, C and Mashek, DG and Massa, V and Massieu, L and Masson, GR and Masuelli, L and Masyuk, AI and Masyuk, TV and Matarrese, P and Matheu, A and Matoba, S and Matsuzaki, S and Mattar, P and Matte, A and Mattoscio, D and Mauriz, JL and Mauthe, M and Mauvezin, C and Maverakis, E and Maycotte, P and Mayer, J and Mazzoccoli, G and Mazzoni, C and Mazzulli, JR and McCarty, N and McDonald, C and McGill, MR and McKenna, SL and McLaughlin, B and McLoughlin, F and McNiven, MA and McWilliams, TG and Mechta-Grigoriou, F and Medeiros, TC and Medina, DL and Megeney, LA and Megyeri, K and Mehrpour, M and Mehta, JL and Meijer, AJ and Meijer, AH and Mejlvang, J and Meléndez, A and Melk, A and Memisoglu, G and Mendes, AF and Meng, D and Meng, F and Meng, T and Menna-Barreto, R and Menon, MB and Mercer, C and Mercier, AE and Mergny, J-L and Merighi, A and Merkley, SD and Merla, G and Meske, V and Mestre, AC and Metur, SP and Meyer, C and Meyer, H and Mi, W and Mialet-Perez, J and Miao, J and Micale, L and Miki, Y and Milan, E and Milczarek, M and Miller, DL and Miller, SI and Miller, S and Millward, SW and Milosevic, I and Minina, EA and Mirzaei, H and Mirzaei, HR and Mirzaei, M and Mishra, A and Mishra, N and Mishra, PK and Misirkic Marjanovic, M and Misasi, R and Misra, A and Misso, G and Mitchell, C and Mitou, G and Miura, T and Miyamoto, S and Miyazaki, M and Miyazaki, M and Miyazaki, T and Miyazawa, K and Mizushima, N and Mogensen, TH and Mograbi, B and Mohammadinejad, R and Mohamud, Y and Mohanty, A and Mohapatra, S and Möhlmann, T and Mohmmed, A and Moles, A and Moley, KH and Molinari, M and Mollace, V and Møller, AB and Mollereau, B and Mollinedo, F and Montagna, C and Monteiro, MJ and Montella, A and Montes, LR and Montico, B and Mony, VK and Monzio Compagnoni, G and Moore, MN and Moosavi, MA and Mora, AL and Mora, M and Morales-Alamo, D and Moratalla, R and Moreira, PI and Morelli, E and Moreno, S and Moreno-Blas, D and Moresi, V and Morga, B and Morgan, AH and Morin, F and Morishita, H and Moritz, OL and Moriyama, M and Moriyasu, Y and Morleo, M and Morselli, E and Moruno-Manchon, JF and Moscat, J and Mostowy, S and Motori, E and Moura, AF and Moustaid-Moussa, N and Mrakovcic, M and Muciño-Hernández, G and Mukherjee, A and Mukhopadhyay, S and Mulcahy Levy, JM and Mulero, V and Muller, S and Münch, C and Munjal, A and Munoz-Canoves, P and Muñoz-Galdeano, T and Münz, C and Murakawa, T and Muratori, C and Murphy, BM and Murphy, JP and Murthy, A and Myöhänen, TT and Mysorekar, IU and Mytych, J and Nabavi, SM and Nabissi, M and Nagy, P and Nah, J and Nahimana, A and Nakagawa, I and Nakamura, K and Nakatogawa, H and 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Levine, H and Jolly, MK and Kulkarni, P and Nanjundiah, V (2020) Phenotypic Switching: Implications in Biology and Medicine. [Book Chapter]

Li, Xuefei and Jolly, Mohit Kumar and George, Jason T and Piente, Kenneth J and Levine, Herbert (2019) Computational Modeling of the Crosstalk Between Macrophage Polarization and Tumor Cell Plasticity in the Tumor Microenvironment. In: FRONTIERS IN ONCOLOGY, 9 .

Lin, X and Kulkarni, P and Bocci, F and Schafer, NP and Roy, S and Tsai, MY and He, Y and Chen, Y and Rajagopalan, K and Mooney, SM and Zeng, Y and Weninger, K and Grishaev, A and Onuchic, JN and Levine, H and Wolynes, PG and Salgia, R and Rangarajan, G and Uversky, V and Orban, J and Jolly, MK (2019) Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level. In: Biomolecules, 9 (2).

Lourenco, AR and Ban, Y and Crowley, MJ and Lee, SB and Ramchandani, D and Du, W and Elemento, O and George, JT and Jolly, MK and Levine, H and Sheng, J and Wong, ST and Altorki, NK and Gao, D (2020) Differential contributions of pre- And post-EMT tumor cells in breast cancer metastasis. In: Cancer Research, 80 (2). pp. 163-169.

Lourenco, AR and Ban, Y and Crowley, MJ and Lee, SB and Ramchandani, D and Du, W and Elemento, O and George, JT and Jolly, MK and Levine, H and Sheng, J and Wong, ST and Altorki, NK and Gao, D (2020) Differential contributions of pre- And post-EMT tumor cells in breast cancer metastasis. In: Cancer Research, 80 (2). pp. 163-169.

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Maity, S and Muhamed, J and Sarikhani, M and Kumar, S and Ahamed, F and Spurthi, KM and Ravi, V and Jain, A and Khan, D and Arathi, BP and Desingu, PA and Sundaresan, NR (2020) Sirtuin 6 deficiency transcriptionally up-regulates TGF-β signaling and induces fibrosis in mice. In: Journal of Biological Chemistry, 295 (2). pp. 415-434.

Malik, SA and Mohanta, Z and Srivastava, C and Atreya, HS (2020) Modulation of protein-graphene oxide interactions with varying degrees of oxidation. In: Nanoscale Advances, 2 (5). pp. 1904-1912.

Mambetsariev, Isa and Mirzapoiazova, Tamara and Lennon, Frances and Jolly, Mohit Kumar and Li, Haiqing and Nasser, Mohd W and Vora, Lalit and Kulkarni, Prakash and Batra, Surinder K and Salgia, Ravi (2019) Small Cell Lung Cancer Therapeutic Responses Through Fractal Measurements: From Radiology to Mitochondrial Biology. In: JOURNAL OF CLINICAL MEDICINE, 8 (7).

Mandal, S and Tejaswi, T and Janivara, R and Srikrishnan, S and Thakur, P and Sahoo, S and Chakraborty, P and Sohal, SS and Levine, H and George, JT and Jolly, MK (2022) Transcriptomic-based quantification of the epithelial-hybrid-mesenchymal spectrum across biological contexts. In: Biomolecules, 12 (1).

Mandal, Sourav and Basu, Bikramjit (2018) Probing the influence of post-processing on microstructure and in situ compression failure with in silico modeling of 3D-printed scaffolds. In: JOURNAL OF MATERIALS RESEARCH, 33 (14). pp. 2062-2076.

Masuda, H and Harano, K and Miura, S and Wang, Y and Hirota, Y and Harada, O and Jolly, MK and Matsunaga, Y and Lim, B and Wood, AL and Parinyanitikul, N and Lee, HJ and Gong, G and George, JT and Levine, H and Lee, J and Wang, X and Lucci, A and Rao, A and Schweitzer, BL and Lawrence, OR and Seitz, RS and Morris, SW and Hout, DR and Nakamura, S and Krishnamurthy, S and Ueno, NT (2022) Changes in Triple-Negative Breast Cancer Molecular Subtypes in Patients Without Pathologic Complete Response After Neoadjuvant Systemic Chemotherapy. In: JCO Precision Oncology, 6 .

Mateti, T and Kumari, M and Savita, . and Chaudhury, SI and Likhith, K and Thakur, G (2024) Modified Starches Used in the Food Industry and Biomedical Applications. [Book Chapter]

Mattei, F and Jolly, MK (2023) Interdisciplinary research in cancer and immunity employing biophysical approaches. In: iScience, 26 (5).

Medhi, Biswajit and Hegde, Gopalkrishna M and Reddy, Kalidevapura Jagannatha (2019) Time-resolved quantitative visualization of complex flow field emitted from an open ended shock tube using a wavefront measuring camera. In: OPTICS AND LASERS IN ENGINEERING, 122 . pp. 354-360.

Mehta, K and Chacko, LA and Chug, MK and Jhunjhunwala, S and Ananthanarayanan, V (2019) Association of mitochondria with microtubules inhibits mitochondrial fission by precluding assembly of the fission protein Dnm1. In: The Journal of biological chemistry, 294 (10). pp. 3385-3396.

Mishra, D and Neethu, RS and Shetty, V and Shenoy, SJ and Komath, M and Varma, H and Sabareeswaran, A and Basu, B (2023) Contact Guidance Mediated by Hybrid Thread Topography Enhances Osseointegration of As-machined Ti6Al4V Dental Implant. In: Regenerative Engineering and Translational Medicine .

Mishra, Madhulika and Jayal, Priyanka and Karande, Anjali A and Chandra, Nagasuma (2018) Identification of a co-target for enhancing efficacy of sorafenib in HCC through a quantitative modeling approach. In: FEBS JOURNAL, 285 (21). pp. 3977-3992.

Mishra, S and Cosentino, C and Tamta, AK and Khan, D and Srinivasan, S and Ravi, V and Abbotto, E and Arathi, BP and Kumar, S and Jain, A and Ramaian, AS and Kizkekra, SM and Rajagopal, R and Rao, S and Krishna, S and Asirvatham-Jeyaraj, N and Haggerty, ER and Silberman, DM and Kurland, IJ and Veeranna, RP and Jayavelu, T and Bruzzone, S and Mostoslavsky, R and Sundaresan, NR (2022) Sirtuin 6 inhibition protects against glucocorticoid-induced skeletal muscle atrophy by regulating IGF/PI3K/AKT signaling. In: Nature Communications, 13 (1).

Modak, P and Ramachandran, RV and Nahid, - and Bhat, R and Saini, DK and Ghosh, A (2023) Integrating Live-Cell Imaging with Magnetic Manipulation System. In: 6th International Conference on Manipulation, Automation, and Robotics at Small Scales, MARSS 2023, 9 - 13 October 2023, Abu Dhabi.

Mohanta, Z and Gaonkar, SK and Kumar, M and Saini, J and Tiwari, V and Srivastava, C and Atreya, HS (2020) Influence of Oxidation Degree of Graphene Oxide on Its Nuclear Relaxivity and Contrast in MRI. In: ACS Omega . (In Press)

Mohanta, Zinia and Atreya, Hanudatta S and Srivastava, Chandan (2018) Correlation between defect density in mechanically milled graphite and total oxygen content of graphene oxide produced from oxidizing the milled graphite. In: SCIENTIFIC REPORTS, 8 .

Mohanty, A and Nam, A and Pozhitkov, A and Yang, L and Srivastava, S and Nathan, A and Wu, X and Mambetsariev, I and Nelson, M and Subbalakshmi, AR and Guo, L and Nasser, MW and Batra, SK and Orban, J and Jolly, MK and Massarelli, E and Kulkarni, P and Salgia, R (2020) A Non-genetic Mechanism Involving the Integrin β4/Paxillin Axis Contributes to Chemoresistance in Lung Cancer. In: iScience, 23 (9).

Monavarian, M and Elhaw, AT and Tang, PW and Javed, Z and Shonibare, Z and Scalise, CB and Arend, R and Jolly, MK and Sewell- Loftin, MK and Hempel, N and Mythreye, K (2022) Emerging perspectives on growth factor metabolic relationships in the ovarian cancer ascites environment. In: Seminars in Cancer Biology .

More, MH and Varankar, SS and Naik, RR and Dhake, RD and Ray, P and Bankar, RM and Mali, AM and Subbalakshmi, AR and Chakraborty, P and Jolly, MK and Bapat, SA (2022) A Multistep Tumor Growth Model of High-Grade Serous Ovarian Carcinoma Identifies Hypoxia-Associated Signatures. In: Cells Tissues Organs, 213 (2). pp. 79-95.

Mukadam, Farhan Adam and Mathew, John Kandam Kulathu and Nundy, Mahatabb and Perumalla, Susmitha Karunasree and Jhunjhunwala, Siddharth (2022) Clinician Scientists in the Indian Context. In: Journal of the Indian Institute of Science . ISSN 0970-4140

Mukherjee, R and Verma, T and Nandi, D and Umapathy, S (2020) Identification of a resonance Raman marker for cytochrome to monitor stress responses in Escherichia coli. In: Analytical and Bioanalytical Chemistry, 412 (22). pp. 5379-5388.

Mukherjee, R and Verma, T and Nandi, D and Umapathy, S (2020) Understanding the effects of culture conditions in bacterial growth: A biochemical perspective using Raman microscopy. In: Journal of Biophotonics, 13 (1).

Mukherjee, S and Ahmed, N and Ramachandran, RV and Bhat, R and Saini, DK and Ghosh, A (2023) Correlating the Dynamics of Magnetic Nanobots with the Intracellular Topography. In: 6th International Conference on Manipulation, Automation, and Robotics at Small Scales, 09-13 October 2023, Abu Dhabi.

Muralidharan, S and Sahoo, S and Saha, A and Chandran, S and Majumdar, SS and Mandal, S and Levine, H and Jolly, MK (2022) Quantifying the Patterns of Metabolic Plasticity and Heterogeneity along the Epithelial–Hybrid–Mesenchymal Spectrum in Cancer. In: Biomolecules, 12 (2).

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Nagaraja, P and Gopalan, BP and DaSouza, RR and Sarkar, D and Rajnala, N and Dixit, NM and Shet, A (2021) The within-host fitness of HIV-1 increases with age in ART-naïve HIV-1 subtype C infected children. In: Scientific Reports, 11 (1).

Nagarajan, D and Nagarajan, T and Nanajkar, N and Chandra, N (2019) A uniform in vitro efficacy dataset to guide antimicrobial peptide design. In: Data, 4 (1).

Naik, HC and Chandel, D and Majumdar, S and Arava, M and Baro, R and BV, H and Hari, K and Ayyamperumal, P and Manhas, A and Jolly, MK and Gayen, S (2024) Lineage-specific dynamics of loss of X upregulation during inactive-X reactivation. In: Stem Cell Reports, 19 (11). pp. 1564-1582.

Naik, HC and Hari, K and Chandel, D and Jolly, MK and Gayen, S (2022) Single-cell analysis reveals X upregulation is not global in pre-gastrulation embryos. In: iScience, 25 (6).

Naik, HC and Hari, K and Chandel, D and Mandal, S and Jolly, MK and Gayen, S (2021) Semicoordinated allelic-bursting shape dynamic random monoallelic expression in pregastrulation embryos. In: iScience, 24 (9).

Nain, A and Chakraborty, S and Jain, N and Choudhury, S and Chattopadhyay, S and Chatterjee, K and Debnath, S (2024) 4D hydrogels: fabrication strategies, stimulation mechanisms, and biomedical applications. In: Biomaterials Science .

Nair, MG and Mavatkar, AD and Naidu, CM and V P, S and C E, A and Rajarajan, S and Sahoo, S and Mohan, G and Jaikumar, VS and Ramesh, RS and B S, S and Jolly, MK and Maliekal, TT and Prabhu, JS (2024) Elucidating the Role of MicroRNA-18a in Propelling a Hybrid Epithelial�Mesenchymal Phenotype and Driving Malignant Progression in ER-Negative Breast Cancer. In: Cells, 13 (10).

Nair, RR and Madiwale, SV and Saini, DK (2018) Clampdown of inflammation in aging and anticancer therapies by limiting upregulation and activation of GPCR, CXCR4. In: npj Aging and Mechanisms of Disease, 4 (1).

Najafi, A and Jolly, MK and George, JT (2023) Population dynamics of EMT elucidates the timing and distribution of phenotypic intra-tumoral heterogeneity. In: iScience, 26 (7).

Najafi, A and Jolly, MK and George, JT (2024) Protocol for inferring epithelial-to-mesenchymal transition trajectories from single-cell RNA sequencing data using R. In: STAR Protocols, 5 (1).

Nam, A and Mohanty, A and Bhattacharya, S and Kotnala, S and Achuthan, S and Hari, K and Srivastava, S and Guo, L and Nathan, A and Chatterjee, R and Jain, M and Nasser, MW and Batra, SK and Rangarajan, G and Massarelli, E and Levine, H and Jolly, MK and Kulkarni, P and Salgia, R (2022) Dynamic phenotypic switching and group behavior help non-small cell lung cancer cells evade chemotherapy. In: Biomolecules, 12 (1).

Nandi, D and Pathak, S and Verma, T and Singh, M and Chattopadhyay, A and Thakur, S and Raghavan, A and Gokhroo, A and Vijaya, mahantesh (2019) T cell costimulation, checkpoint inhibitors and anti-tumor therapy. In: Journal of Biosciences, 45 (1).

Narayanaswamy, Venkatesha and Obaidat, Ihab M and Kamzin, Aleksandr S and Latiyan, Sachin and Jain, Shilpee and Kumar, Hemant and Srivastava, Chandan and Alaabed, Sulaiman and Issa, Bashar (2019) Synthesis of Graphene Oxide-Fe3O4 Based Nanocomposites Using the Mechanochemical Method and in Vitro Magnetic Hyperthermia. In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 20 (13).

Narayanaswamy, Venkatesha and Obaidat, Ihab M and Latiyan, Sachin and Jain, Shilpee and Nayek, Chiranjib and Goankar, Sumana and AL Akhras, M Ali and Al Omari, Imaddin A (2019) Role of interface quality in iron oxide core/shell nanoparticles on heating efficiency and transverse relaxivity. In: MATERIALS EXPRESS, 9 (4). pp. 328-336.

Naskar, S and Chandan, Chandan and Baskaran, D and Roy Choudhury, AN and Chatterjee, S and Karunakaran, S and Murthy, BVS and Basu, B (2021) Dosimetry of pulsed magnetic field towards attaining bacteriostatic effect on Enterococcus faecalis: Implications for endodontic therapy. In: International Endodontic Journal .

Naskar, S and Kumaran, V and Basu, B (2018) Reprogramming the Stem Cell Behavior by Shear Stress and Electric Field Stimulation: Lab-on-a-Chip Based Biomicrofluidics in Regenerative Medicine. In: Regenerative Engineering and Translational Medicine . (In Press)

Naskar, S and Panda, AK and Jana, A and Kanagaraj, S and Basu, B (2020) UHMWPE-MWCNT-nHA based hybrid trilayer nanobiocomposite: Processing approach, physical properties, stem/bone cell functionality, and blood compatibility. In: Journal of Biomedical Materials Research - Part B Applied Biomaterials, 108 (5). pp. 2320-2343.

Naskar, S and Panda, AK and Kumaran, V and Mehta, B and Basu, B (2018) Controlled shear flow directs osteogenesis on uhmwpe-based hybrid nanobiocomposites in a custom-designed PMMA microfluidic device. In: ACS Applied Bio Materials, 1 (2). pp. 414-435.

Naskar, Sharmistha and Kumaran, Viswanathan and Markandeya, Yogananda S and Mehta, Bhupesh and Basu, Bikramjit (2020) Neurogenesis-on-Chip: Electric field modulated transdifferentiation of human mesenchymal stem cell and mouse muscle precursor cell coculture. In: BIOMATERIALS, 226 .

Nath, B and Behera, SK and Kumar, J and Hemmerle, A and Fontaine, P and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2023) Understanding the Heterointerfaces in Perovskite Solar Cells via Hole Selective Layer Surface Functionalization. In: Advanced Materials .

Nath, B and Chaudhuri, RR and Shrivastava, M and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2024) Role of transition metal iodides in defect and charge dynamics of perovskite solar cells. In: Solar Energy, 282 .

Nath, B and Khasnabis, S and Ramamurthy, PC and Mahapatra, DR and Hedge, G (2023) Interfacial engineering using ammonia-functionalized MXene in perovskite solar cells. In: Nanotechnology for Environmental Engineering, 8 . pp. 847-858.

Nath, B and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2022) Effect of cuprous iodide passivation in perovskite solar cells. In: Journal of Materials Science: Materials in Electronics, 33 (18). pp. 14457-14467.

Nath, B and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2022) Electrode Transport Layer-Metal Electrode Interface Morphology Tailoring for Enhancing the Performance of Perovskite Solar Cells. In: ACS Applied Electronic Materials, 4 (2). pp. 689-697.

Nath, B and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2021) Effect of top electrode using Silver Nano powder on the performance of Perovskite Solar cells. In: 48th IEEE Photovoltaic Specialists Conference, 20-25 Jun 2021, Bengaluru, pp. 326-329.

Nath, B and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2021) Effect of top electrode using Silver Nano powder on the performance of Perovskite Solar cells. In: 48th IEEE Photovoltaic Specialists Conference, PVSC 2021, 20-25 jun 2021, Fort Lauderdale, pp. 326-329.

Nath, B and Singh, S and Kumar Behera, S and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2023) Perovskite solar cell performance analysis via interface engineering employing MOF-composite. In: Solar Energy, 257 . 249 – 256.

Nath, B and Uppara, B and Singh, S and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2024) Exploring the potential of green synthesized ZnO-SnO2 composite as an effective electron transport layer for perovskite solar cells: A sustainable approach. In: Chemical Engineering Science, 296 .

Nath, Binita and Bidkar, Anil P and Kumar, Vikash and Dalal, Amaresh and Jolly, Mohit Kumar and Ghosh, Siddhartha S and Biswas, Gautam (2019) Deciphering Hydrodynamic and Drug-Resistant Behaviors of Metastatic EMT Breast Cancer Cells Moving in a Constricted Microcapillary. In: JOURNAL OF CLINICAL MEDICINE, 8 (8).

Navalkar, A and Paul, A and Sakunthala, A and Pandey, S and Dey, AK and Saha, S and Sahoo, S and Jolly, MK and Maiti, TK and Maji, SK (2022) Oncogenic gain of function due to p53 amyloids occurs through aberrant alteration of cell cycle and proliferation. In: Journal of cell science, 135 (15).

Nayak, Biswadeep and Balachander, Gowri Manohari and Manjunath, Sathish and Rangarajan, Annapoorni and Chatterjee, Kaushik (2019) Tissue mimetic 3D scaffold for breast tumor-derived organoid culture toward personalized chemotherapy. In: COLLOIDS AND SURFACES B-BIOINTERFACES, 180 . pp. 334-343.

Nihan Kilinc, A and Sugiyama, N and Reddy Kalathur, RK and Antoniadis, H and Birogul, H and Ishay-Ronen, D and George, JT and Levine, H and Kumar Jolly, M and Christofori, G (2020) Histone deacetylases, Mbd3/NuRD, and Tet2 hydroxylase are crucial regulators of epithelial–mesenchymal plasticity and tumor metastasis. In: Oncogene, 39 (7). pp. 1498-1513.

Nilawar, S and Yadav, P and Jain, N and Saini, DK and Chatterjee, K (2024) Protective Role of Nanoceria-Infused Nanofibrous Scaffold toward Bone Tissue Regeneration with Senescent Cells. In: Biomacromolecules, 25 (7). pp. 4074-4086.

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Paddillaya, N and Mishra, A and Kondaiah, P and Pullarkat, P and Menon, GI and Gundiah, N (2019) Biophysics of Cell-Substrate Interactions Under Shear. In: Frontiers in Cell and Developmental Biology, 7 .

Padmanabhan, P and Desikan, R and Dixit, NM (2022) Modeling how antibody responses may determine the efficacy of COVID-19 vaccines. In: Nature Computational Science, 2 (2). pp. 123-131.

Padmanabhan, P and Desikan, R and Dixit, NM (2020) Targeting TMPRSS2 and Cathepsin B/L together may be synergistic against SARSCoV- 2 infection. In: PLoS Computational Biology, 16 (12).

Padmanabhan, P and Dixit, NM (2023) Modelling how increased Cathepsin B/L and decreased TMPRSS2 usage for cell entry by the SARS-CoV-2 Omicron variant may affect the efficacy and synergy of TMPRSS2 and Cathepsin B/L inhibitors. In: Journal of Theoretical Biology, 572 .

Padmanabhan, P and Raja, R and Dixit, NM (2020) Bistability in virus-host interaction networks underlies the success of hepatitis C treatments. [Book Chapter]

Padmanabhan, Pranesh and Dixit, Narendra M (2017) Inhibitors of hepatitis C virus entry may be potent ingredients of optimal drug combinations. In: Proceedings of the National Academy of Sciences, 114 (23). E4524 -E4526. ISSN 0027-8424

Pai, B Ganesh and Kulkarni, V Ajay and Jain, Shilpee (2017) Study of smart antibacterial PCL-xFe(3)O(4) thin films using mouse NIH-3T3 fibroblast cells in vitro. In: JOURNAL OF BIOMEDICAL MATERIALS RESEARCH PART B-APPLIED BIOMATERIALS, 105 (4). pp. 795-804.

Pal, M and Dasgupta, D and Somalwar, N and Reshma, VR and Tiwari, MK and Teja, D and Narayana, SM and Katke, A and Jayshree, RS and Bhat, R and Saini, DK and Ghosh, A (2020) Helical nanobots as mechanical probes of intra- And extracellular environments. In: Journal of Physics Condensed Matter, 32 (22).

Pal, UM and Saxena, M and Anil Vishnu, GK and Parsana, D and Sarvani, BSR and Varma, M and Jayachandra, M and Kurpad, V and Baruah, D and Gogoi, G and Vaidya, JS and Pandya, HJ (2020) Optical spectroscopy-based imaging techniques for the diagnosis of breast cancer: A novel approach. In: Applied Spectroscopy Reviews .

Pal, UM and Vishnu GK, A and Varma, M and Vaidya, JS and Pandya, HJ (2021) Thermo-optic measurements and their inter-dependencies for delineating cancerous breast biopsy tissue from adjacent normal. In: Journal of Biophotonics, 14 (8).

Pally, D and Goutham, S and Bhat, R (2022) Extracellular matrix as a driver for intratumoral heterogeneity. In: Physical Biology, 19 (4).

Panda, AK and Basu, B (2021) Biomaterials-based bioengineering strategies for bioelectronic medicine. In: Materials Science and Engineering R: Reports, 146 .

Panda, AK and Basu, B (2021) Functionalized Fluoropolymer-Compatibilized Elastomeric Bilayer Composites for Osteochondral Repair: Unraveling the Role of Substrate Stiffness and Functionalities. In: ACS Applied Bio Materials .

Panda, AK and Basu, B (2023) Regenerative bioelectronics: A strategic roadmap for precision medicine. In: Biomaterials, 301 .

Panda, AK and Ravikumar, R and Gebrekrstos, A and Bose, S and Markandeya, YS and Mehta, B and Basu, B (2021) Tunable Substrate Functionalities Direct Stem Cell Fate toward Electrophysiologically Distinguishable Neuron-like and Glial-like Cells. In: ACS Applied Materials and Interfaces, 13 (1). pp. 164-185.

Panda, AK and Sitaramgupta, V and Pandya, HJ and Basu, B (2022) Electrical stimulation waveform-dependent osteogenesis on PVDF/BaTiO3 composite using a customized and programmable cell stimulator. In: Biotechnology and Bioengineering .

Pandit, P and Bhagat, S and Rananaware, P and Mohanta, Z and Kumar, M and Tiwari, V and Singh, S and Brahmkhatri, VP (2022) Iron oxide nanoparticle encapsulated; folic acid tethered dual metal organic framework-based nanocomposite for MRI and selective targeting of folate receptor expressing breast cancer cells. In: Microporous and Mesoporous Materials, 340 .

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Pasani, S and Sahoo, S and Jolly, MK (2021) Hybrid E/M phenotype(S) and stemness: A mechanistic connection embedded in network topology. In: Journal of Clinical Medicine, 10 (1). pp. 1-19.

Pasha, SV and Dadhwal, VK (2024) National analysis on variations in estimates of forest cover dynamics over India (2001�2020) using multiple techniques and data sources. In: Spatial Information Research .

Pathak, BG and Mathew, G and Chandru, V and Kamath, MS (2023) Catalyzing healthcare accessibility through cashless payment gateways in India: a digital revolution. In: The Lancet Regional Health - Southeast Asia .

Pathak, S and Jolly, MK and Nandi, D (2021) Countries with high deaths due to flu and tuberculosis demonstrate lower COVID-19 mortality: roles of vaccinations. In: Human Vaccines and Immunotherapeutics .

Patil, G and Ramachandran, RV and Ghosh, A (2022) Optimisation of techniques for fabrication of nanopatterned substrates. In: 2022 IEEE International Conference on Emerging Electronics, 11- 14 Dec 2022, Bangalore.

Patkulkar, PA and Subbalakshmi, AR and Jolly, MK and Sinharay, S (2022) Mapping Spatiotemporal Heterogeneity in Tumor Profiles by Integrating High-Throughput Imaging and Omics Analysis. In: ACS Omega .

Pattanayak, P and Pramanik, N and Papiya, F and Kumar, V and Kundu, PP (2020) Metal-free keratin modified poly(pyrrole-co-aniline)-reduced graphene oxide based nanocomposite materials: A promising cathode catalyst in microbial fuel cell application. In: Journal of Environmental Chemical Engineering, 8 (3).

Pattanayak, Prasanta and Papiya, Farhan and kumar, Vikash and Pramanik, Nilkamal and Kundu, Patit Paban (2019) Deposition of Ni-NiO nanoparticles on the reduced graphene oxide filled polypyrrole: evaluation as cathode catalyst in microbial fuel cells. In: SUSTAINABLE ENERGY & FUELS, 3 (7). pp. 1808-1826.

Pillai, M and Chen, Z and Jolly, MK and Li, C (2022) Quantitative landscapes reveal trajectories of cell-state transitions associated with drug resistance in melanoma. In: iScience, 25 (12).

Pillai, M and Hojel, E and Jolly, MK and Goyal, Y (2023) Unraveling non-genetic heterogeneity in cancer with dynamical models and computational tools. In: Nature Computational Science, 3 (4). pp. 301-313.

Pillai, M and Jolly, MK (2021) Systems-level network modeling deciphers the master regulators of phenotypic plasticity and heterogeneity in melanoma. In: iScience, 24 (10).

Pillai, M and Rajaram, G and Thakur, P and Agarwal, N and Muralidharan, S and Ray, A and Barbhaya, D and Somarelli, JA and Jolly, MK (2022) Mapping phenotypic heterogeneity in melanoma onto the epithelial-hybrid-mesenchymal axis. In: Frontiers in Oncology, 12 .

Ponmalar, Ilanila I and Cheerla, Ramesh and Ayappa, K Ganapathy and Basu, Jaydeep K (2019) Correlated protein conformational states and membrane dynamics during attack by pore-forming toxins. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116 (26). pp. 12839-12844.

Ponmalar, Ilanila Ilangumaran (2019) Elucidating the Effect of Listeriolysin O Structural Intermediates on Lipid Diffusivity. In: https://www.sciencedirect.com/science/article/abs/pii/S0006349518340372, 16 (3). 514a.

Ponmalar, Ilanila Ilangumaran and Swain, Jitendriya and Basu, Jaydeep K (2022) Modification of bacterial cell membrane dynamics and morphology upon exposure to sub inhibitory concentrations of ciprofloxacin. In: Biochimica et Biophysica Acta (BBA) - Biomembranes, 1864 (8). ISSN 00052736

Prakash, O and Sil, S and Verma, T and Umapathy, S (2019) Direct Detection of Bacteria Using Positively Charged Ag/Au Bimetallic Nanoparticles: A Label-free Surface-Enhanced Raman Scattering Study Coupled with Multivariate Analysis. In: Journal of Physical Chemistry C, 124 (1). pp. 861-869.

Pramanik, D and Kanchi, S and Ayappa, KG and Maiti, PK (2021) Dendrimers: A novel nanomaterial. [Book Chapter]

Pramanik, N and De, T and Sharma, P and Alakesh, A and Jagirdar, SK and Rangarajan, A and Jhunjhunwala, S (2022) Surface-Coated Cerium Nanoparticles to Improve Chemotherapeutic Delivery to Tumor Cells. In: ACS Omega .

Pramanik, Nilkamal and Ranganathan, Santhalakshmi and Rao, Sunaina and Suneet, Kaushik and Jain, Shilpee and Rangarajan, Annapoorni and Jhunjhunwala, Siddharth (2019) A Composite of Hyaluronic Acid-Modified Graphene Oxide and Iron Oxide Nanoparticles for Targeted Drug Delivery and Magnetothermal Therapy. In: ACS OMEGA, 4 (5). pp. 9284-9293.

Prasad, H and Mathew, JKK and Visweswariah, SS (2022) Receptor Guanylyl Cyclase C and Cyclic GMP in Health and Disease: Perspectives and Therapeutic Opportunities. In: Frontiers in Endocrinology, 13 .

Prasanna, CVS and Jolly, MK and Bhat, R (2024) Spatial heterogeneity in tumor adhesion qualifies collective cell invasion. In: Biophysical Journal, 123 (12). pp. 1635-1647.

Pujar, AA and Barua, A and Dey, PS and Singh, D and Roy, U and Jolly, MK and Hatzikirou, H (2024) Microenvironmental entropy dynamics analysis reveals novel insights into Notch-Delta-Jagged decision-making mechanism. In: iScience, 27 (9).

R

Radhouene, M and Gharsallah, Z and Balaji, VR and Najjar, M and Robinson, S and Janyani, V and Murugan, M and Hegde, G and Sridarshini, T (2022) Design and analysis of a channel drop filter and demultiplexer based on a photonic crystal super ellipse-shaped ring resonator. In: Laser Physics, 32 (11).

Raghav, N and Vishnu GK, A and Deshpande, N and Rangarajan, A (2024) Introduction to machine learning and its applications in stem cell research. [Book Chapter]

Raghavan, JV and Dorai, VK and Sagar, SK and Sivaraman, A and Kalpana S, R and Jhunjhunwala, S (2022) Immunomodulatory Bandage for Accelerated Healing of Diabetic Wounds. In: ACS Bio and Med Chem Au, 2 (4). pp. 409-418.

Raghavan, JV and Jhunjhunwala, S (2023) Role of Innate Immune Cells in Chronic Diabetic Wounds. In: Journal of the Indian Institute of Science .

Raja, Rubesh and Pareek, Aditya and Newar, Kapil and Dixit, Narendra M (2019) Mutational pathway maps and founder effects define the within-host spectrum of hepatitis C virus mutants resistant to drugs. In: PLOS PATHOGENS, 15 (4). e1007701.

Raja, S and Satyanarayan, MN and Umesh, G and Hegde, G (2021) Numerical Investigations on Alternate Droplet Formation in Microfluidic Devices. In: Microgravity Science and Technology, 33 (6).

Rajarajan, S and Snijesh, VP and Anupama, CE and Nair, MG and Mavatkar, AD and Naidu, CM and Patil, S and Nimbalkar, VP and Alexander, A and Pillai, M and Jolly, MK and Sabarinathan, R and Ramesh, RS and BS, S and Prabhu, JS (2023) An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers. In: Translational Oncology, 37 .

Rajasekaran, M and Ayappa, Ganapathy K (2019) Enhancing the Dynamics of Water Confined between Graphene Oxide Surfaces with Janus Interfaces: A Molecular Dynamics Study. In: JOURNAL OF PHYSICAL CHEMISTRY B, 123 (13). pp. 2978-2993.

Rajasekaran, M and Ganapathy Ayappa, K (2020) Dynamical Transitions of Supercooled Water in Graphene Oxide Nanopores: Influence of Surface Hydrophilicity. In: Journal of Physical Chemistry B, 124 (23). pp. 4805-4820.

Rajput, M and Mondal, P and Yadav, P and Chatterjee, K (2022) Light-based 3D bioprinting of bone tissue scaffolds with tunable mechanical properties and architecture from photocurable silk fibroin. In: International Journal of Biological Macromolecules, 202 . pp. 644-656.

Raju, SR and Balakrishnan, S and Kollimada, S and Chandrashekara, KN and Jampani, A (2020) Anti-tumor effects of Artemisia nilagirica extract on MDA-MB-231 breast cancer cells: deciphering the biochemical and biomechanical properties via TGF-β upregulation. In: Heliyon, 6 (10).

Ramachandran, RV and Barman, A and Modak, P and Bhat, R and Ghosh, A and Saini, DK (2022) How safe are magnetic nanomotors: From cells to animals. In: Biomaterials Advances, 140 .

Ramakrishnan, RK and Mishra, A and Kumar, P and Kaushalram, A and Samad, SA and Hegde, G and Talabattula, S (2023) Integrated multi-mode waveguide devices for quantum communication. In: Journal of Optics (India) .

Ramakrishnan, RK and Ravichandran, AB and Kaushik, I and Hegde, G and Talabattula, S and Rohde, PP (2022) The Quantum Internet: A Hardware Review. In: Journal of the Indian Institute of Science .

Ramesan, VS and Jain, S (2019) Chitosan-Glycerol Gel as Barrier Formulation for Metal Allergy. In: ACS Omega, 4 (3). pp. 5900-5903.

Rananaware, SR and Pathak, S and Majumdar, S and Joseph, JP and Ramteke, NS and Adiga, V and Nandi, D (2023) Dynamic changes in thymic sub-populations during acute and long-term infections with virulent and virulence-attenuated Salmonella Typhimurium strains in C57BL/6 and autoimmune-prone lpr mice. In: Microbial Pathogenesis, 177 .

Ranganathan, S and Kumar, S and Mohanty, SS and Jolly, MK and Rangarajan, A (2020) Cellular Plasticity in Matrix-attached and -Detached Cells: Implications in Metastasis. In: Journal of the Indian Institute of Science, 100 (3). pp. 525-536.

Rao, V and Chandra, N (2022) In-silico study of influence of HLA heterogeneity on CTL responses across ethnicities to SARS-CoV-2. In: Human Immunology .

Rath, Tanmoy and Pramanik, Nilkamal and Kumar, Sandeep (2017) High electrochemical performance flexible solid-state supercapacitor based on Co-doped reduced graphene oxide and silk fibroin composites. In: Energy, 141 . pp. 1982-1988. ISSN 03605442

Rathnakara, SH and Raju, SR and Kumar, R and Hegde, G (2022) Silk fibroin nanofiber scaffold (SFNS) as a graft material for myringoplasty- in vitro and in vivo. In: Materialia, 26 .

Ravi, V and Jain, A and Khan, D and Ahamed, F and Mishra, S and Giri, M and Inbaraj, M and Krishna, S and Sarikhani, M and Maity, S and Kumar, S and Shah, RA and Dave, P and Pandit, AS and Rajendran, R and Desingu, PA and Varshney, U and Das, S and Kolthur-Seetharam, U and Rajakumari, S and Singh, M and Sundaresan, NR (2019) SIRT6 transcriptionally regulates global protein synthesis through transcription factor Sp1 independent of its deacetylase activity. In: Nucleic Acids Research, 47 (17). pp. 9115-9131.

Ravi, V and Jain, A and Mishra, S and Sundaresan, NR (2020) Measuring Protein Synthesis in Cultured Cells and Mouse Tissues Using the Non-radioactive SUnSET Assay. In: Current protocols in molecular biology, 133 (1).

Ravi, V and Jain, A and Taneja, A and Chatterjee, K and Sundaresan, NR (2021) Isolation and Culture of Neonatal Murine Primary Cardiomyocytes. In: Current Protocols, 1 (7).

Ravichandran, S and Banerjee, U and DR, GD and Kandukuru, R and Thakur, C and Chakravortty, D and Balaji, KN and Singh, A and Chandra, N (2021) VB10, a new blood biomarker for differential diagnosis and recovery monitoring of acute viral and bacterial infections. In: EBioMedicine, 67 .

Ray, R and Goyal, A and Prabhu, A and Parekkh, S and Maddasani, S and Mani, NK (2023) Paper-based dots and smartphone for detecting counterfeit country eggs. In: Food Chemistry, 403 .

Remanan, S and Samantaray, PK and Bose, S and Das, NC (2021) Phase transited lysozyme particles and MoS2 nanosheets modified elastomer-like antibacterial and antifouling microfiltration membrane derived from poly(ethylene-co-methyl acrylate)/poly(vinylidene fluoride) (EMA/PVDF) blend for water purification application. In: Microporous and Mesoporous Materials, 316 .

Roy, N and Kshattry, M and Mandal, S and Jolly, MK and Bhattacharyya, DK and Barah, P (2021) An integrative systems biology approach identifies molecular signatures associated with gallbladder cancer pathogenesis. In: Journal of Clinical Medicine, 10 (16).

Roy, N and Lodh, R and Mandal, S and Kumar Jolly, M and Sarma, A and Bhattacharyya, DK and Barah, P (2025) Comparative transcriptomic analysis uncovers molecular heterogeneity in hepatobiliary cancers. In: Translational Oncology, 51 .

Roy, U and Collins, T and Jolly, MK and Katira, P (2012) Biophysical and Biochemical Mechanisms Underlying Collective Cell Migration in Cancer Metastasis. [Book Chapter]

Roy, U and Mugler, A (2021) Intermediate adhesion maximizes migration velocity of multicellular clusters. In: Physical Review E, 103 (3).

Roy, U and Singh, D and Vincent, N and Haritas, CK and Jolly, MK (2023) Spatiotemporal Patterning Enabled by Gene Regulatory Networks. In: ACS Omega .

Roy Barman, S and Jhunjhunwala, S (2024) Electrical Stimulation for Immunomodulation. In: ACS Omega, 9 (1). pp. 52-66.

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Sahoo, S and Ashraf, B and Duddu, AS and Biddle, A and Jolly, MK (2022) Interconnected high-dimensional landscapes of epithelial�mesenchymal plasticity and stemness in cancer. In: Clinical and Experimental Metastasis .

Sahoo, S and Hari, K and Jolly, MK (2025) Design principles of regulatory networks underlying epithelial mesenchymal plasticity in cancer cells. In: Current Opinion in Cell Biology, 92 .

Sahoo, S and Jhunjhunwala, S and Jolly, MK (2020) The Good, The Bad and The Ugly: A Mathematical Model Investigates the Differing Outcomes Among CoVID-19 Patients. In: Journal of the Indian Institute of Science . (In Press)

Sahoo, S and Mishra, A and Diehl, AM and Jolly, MK (2022) Dynamics of hepatocyte-cholangiocyte cell-fate decisions during liver development and regeneration. In: iScience, 25 (9).

Sahoo, S and Mishra, A and Kaur, H and Hari, K and Muralidharan, S and Mandal, S and Jolly, MK (2021) A mechanistic model captures the emergence and implications of non-genetic heterogeneity and reversible drug resistance in ER+ breast cancer cells. In: NAR Cancer, 3 (3).

Sahoo, S and Nayak, SP and Hari, K and Purkait, P and Mandal, S and Kishore, A and Levine, H and Jolly, MK (2021) Immunosuppressive Traits of the Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Immunology, 12 .

Sahoo, S and Singh, D and Chakraborty, P and Jolly, MK (2020) Emergent properties of the HNF4Α-pparγ network may drive consequent phenotypic plasticity in NAFLD. In: Journal of Clinical Medicine, 9 (3).

Sahoo, S and Subbalakshmi, AR and Jolly, MK (2020) The fundamentals of phenotypic plasticity. [Book Chapter]

Samantaray, Kumar Paresh and Madras, Giridhar and Bose, Suryasarathi (2019) Water Remediation Aided by a Graphene-Oxide-Anchored Metal Organic Framework through Pore- and Charge-Based Sieving of Ions. In: ACS SUSTAINABLE CHEMISTRY & ENGINEERING, 7 (1). pp. 1580-1590.

Samantaray, PK and Baloda, S and Madras, G and Bose, S (2019) Interlocked Dithi-Magnetospheres–Decorated MoS2 Nanosheets as Molecular Sieves and Traps for Heavy Metal Ions. In: Advanced Sustainable Systems, 3 (6).

Samantaray, PK and Indrakumar, S and Chatterjee, K and Agarwal, V and Bose, S (2020) 'Template-free' hierarchical MoS2foam as a sustainable 'green' scavenger of heavy metals and bacteria in point of use water purification. In: Nanoscale Advances, 2 (7). pp. 2824-2834.

Samantaray, PK and Kumar, S and Bose, S (2020) �Polycation� modified PVDF based antibacterial and antifouling membranes and �point-of-use supports� for sustainable and effective water decontamination. In: Journal of Water Process Engineering, 38 .

Samantaray, PK and Madras, G and Bose, S (2019) The Key Role of Modifications in Biointerfaces toward Rendering Antibacterial and Antifouling Properties in Polymeric Membranes for Water Remediation: A Critical Assessment. In: Advanced Sustainable Systems, 3 (10).

Samantaray, PK and Madras, G and Bose, S (2019) Microbial Biofilm Membranes for Water Remediation and Photobiocatalysis. In: ACS Symposium Series, 1329 . pp. 321-351.

Samantaray, Paresh Kumar and Baloda, Sonika and Madras, Giridhar and Bose, Suryasarathi (2019) Nanodelivery in Scrolls-Based Nanocarriers: Efficient Constructs for Sustainable Scavenging of Heavy Metal Ions and Inactivate Bacteria. In: ACS SUSTAINABLE CHEMISTRY & ENGINEERING, 7 (23). pp. 18775-18784.

Samim, MM and Dhar, D and Goyal, S and Dey, T and Parvin, N and Shah, RD and Singh, V and Chowdhury, S and Lal, BM and Varghese, N and Gohel, A and Chowdhury, A and Chatterjee, A and Siddiqui, S (2022) AI-CoV Study: Autoimmune Encephalitis Associated With COVID-19 and Its Vaccines—A Systematic Review. In: Journal of Clinical Neurology (Korea), 18 (6). pp. 692-710.

Sankar, S and Chandra, N (2022) SiteMotif: A graph-based algorithm for deriving structural motifs in Protein Ligand binding sites. In: PLoS Computational Biology, 18 (2).

Sankar, S and Chandran Sakthivel, N and Chandra, N (2022) Fast Local Alignment of Protein Pockets (FLAPP): A System-Compiled Program for Large-Scale Binding Site Alignment. In: Journal of Chemical Information and Modeling .

Sankar, S and Preeti, P and Ravikumar, K and Kumar, A and Prasad, Y and Pal, S and Rao, DN and Savithri, HS and Chandra, N (2023) Structural similarities between SAM and ATP recognition motifs and detection of ATP binding in a SAM binding DNA methyltransferase. In: Current Research in Structural Biology, 6 .

Sankar, S and Vasudevan, S and Chandra, N (2024) CRD: A de novo design algorithm for the prediction of cognate protein receptors for small molecule ligands. In: Structure, 32 (3). 362-375.e4.

Sankhe, GD and Raja, R and Singh, DP and Bheemireddy, S and Rana, S and Athira, PJ and Dixit, NM and Saini, DK (2023) Sequestration of histidine kinases by non-cognate response regulators establishes a threshold level of stimulation for bacterial two-component signaling. In: Nature Communications, 14 (1).

Sarate, PS and Murthy, TG and Sharma, P (2022) Column to pile transition in quasi-static deposition of granular chains. In: Soft Matter, 18 (10). pp. 2054-2059.

Sarkar, S and Sinha, SK and Levine, H and Jolly, MK and Dutta, PS (2019) Anticipating critical transitions in epithelial-hybrid-mesenchymal cell-fate determination. In: Proceedings of the National Academy of Sciences of the United States of America, 116 (52). pp. 26343-26352.

Sasmal, R and Som, A and Kumari, P and Nair, RV and Show, S and Barge, NS and Pahwa, M and Das Saha, N and Rao, S and Vasu, S and Agarwal, R and Agasti, SS (2024) Supramolecular Guest Exchange in Cucurbit7uril for Bioorthogonal Fluorogenic Imaging across the Visible Spectrum. In: ACS Central Science .

Sathishkumar, N and Toley, BJ (2024) Direct comparison of colorimetric signal amplification techniques in lateral flow immunoassays. In: Analytical Methods .

Sathyanarayana, P and Visweswariah, SS and Ayappa, KG (2021) Mechanistic Insights into Pore Formation by an α-Pore Forming Toxin: Protein and Lipid Bilayer Interactions of Cytolysin A. In: Accounts of Chemical Research, 54 (1). pp. 120-131.

Sathyanarayana, Pradeep and Desikan, Rajat and Ayappa, Ganapathy K and Visweswariah, Sandhya S (2016) The Solvent-Expoded C-Terminus of the Cytolysin A Pore-Forming Toxin Directs Pore Formation and Channel Function in Membranes. In: BIOCHEMISTRY, 55 (42). pp. 5952-5961.

Sathyanarayana, Pradeep and Maurya, Satyaghosh and Ayappa, Ganapathy and Visweswariah, Sandhya S and Roy, Rahul (2017) Studying Binding, Conformational Transition and Assembly of E. Coli Cytolysin a Pore Forming Toxin by Single Molecule Fluorescence. In: BIOPHYSICAL JOURNAL, 112 (3, 1). 524A.

Saxena, K and Jolly, MK and Balamurugan, K (2020) Hypoxia, partial EMT and collective migration: Emerging culprits in metastasis. In: Translational Oncology, 13 (11).

Saxena, K and Srikrishnan, S and Celia-Terrassa, T and Jolly, MK (2022) OVOL1/2: Drivers of Epithelial Differentiation in Development, Disease, and Reprogramming. In: Cells Tissues Organs, 211 (2). 183 -192.

Saxena, K and Subbalakshmi, AR and Jolly, MK (2019) Phenotypic heterogeneity in circulating tumor cells and its prognostic value in metastasis and overall survival. In: EBioMedicine, 46 . pp. 4-5.

Saxena, K and Subbalakshmi, AR and Kulkarni, P and Jolly, MK (2022) Cancer: More than a geneticist’s Pandora’s box. In: Journal of Biosciences, 47 (2).

Saxena, K and Toley, BJ (2025) Alternative chromogenic substrates for horseradish peroxidase-enhanced lateral flow immunoassays provide higher sensitivity at lower cost. In: Sensors and Actuators B: Chemical, 426 .

Saxena, Kritika and Jolly, Mohit Kumar (2019) Acute vs. Chronic vs. Cyclic Hypoxia: Their Differential Dynamics, Molecular Mechanisms, and Effects on Tumor Progression. In: BIOMOLECULES, 9 (8).

Sehgal, M and Ramu, S and Vaz, JM and Ganapathy, YR and Muralidharan, S and Venkatraghavan, S and Jolly, MK (2024) Characterizing heterogeneity along EMT and metabolic axes in colorectal cancer reveals underlying consensus molecular subtype-specific trends. In: Translational Oncology, 40 .

Sehgal, M and Ray, R and Vaz, JM and Kanikar, S and Somarelli, JA and Jolly, MK (2023) Partial EMT and associated changes in cellular plasticity in oncovirus-positive samples. In: Advances in Cancer Biology - Metastasis, 7 .

Selvaraj, S and Gandhi, U and Mangalanathan, U and Hegde, G (2020) Magnetic Force Based Resonant Magnetic Field Sensor with Piezoelectric Readout. In: IEEE Sensors Journal, 20 (22). pp. 13291-13301.

Sen, Pramita and Saha, Ananya and Dixit, Narendra M (2019) You Cannot Have Your Synergy and Efficacy Too. In: TRENDS IN PHARMACOLOGICAL SCIENCES, 40 (11). pp. 811-817.

Sengupta, S and Singh, N and Paul, A and Datta, D and Chatterjee, D and Mukherjee, S and Gadhe, L and Devi, J and Mahesh, Y and Jolly, MK and Maji, SK (2023) p53 amyloid pathology is correlated with higher cancer grade irrespective of the mutant or wild-type form. In: Journal of Cell Science, 136 (17).

Shah, M and Chacko, LA and Joseph, JP and Ananthanarayanan, V (2021) Mitochondrial dynamics, positioning and function mediated by cytoskeletal interactions. In: Cellular and Molecular Life Sciences .

Sharma, P and Alakesh, A and Jhunjhunwala, S (2022) The consequences of particle uptake on immune cells. In: Trends in Pharmacological Sciences .

Sharma, P and Desikan, R and Ayappa, KG (2021) Evaluating Coarse-Grained MARTINI Force-Fields for Capturing the Ripple Phase of Lipid Membranes. In: Journal of Physical Chemistry B, 124 (24). pp. 6587-6599.

Sharma, P and Parthasarathi, S and Patil, N and Waskar, M and Raut, JS and Puranik, M and Ayappa, KG and Basu, JK (2020) Assessing Barriers for Antimicrobial Penetration in Complex Asymmetric Bacterial Membranes: A Case Study with Thymol. In: Langmuir, 36 (30). pp. 8800-8814.

Sharma, P and Sen, D and Neelakantan, V and Shankar, V and Jhunjhunwala, S (2019) Disparate effects of PEG or albumin based surface modification on the uptake of nano- and micro-particles. In: Biomaterials Science, 7 (4). pp. 1411-1421.

Sharma, P and Vijaykumar, A and Raghavan, JV and Rananaware, SR and Alakesh, A and Bodele, J and Rehman, JU and Shukla, S and Wagde, V and Nadig, S and Chakrabarti, S and Visweswariah, SS and Nandi, D and Gopal, B and Jhunjhunwala, S (2022) Particle uptake driven phagocytosis in macrophages and neutrophils enhances bacterial clearance. In: Journal of Controlled Release, 343 . pp. 131-141.

Sharma, PR and Dravid, AA and Kalapala, YC and Gupta, VK and Jeyasankar, S and Goswami, A and Agarwal, R (2021) Cationic inhalable particles for enhanced drug delivery to M. tuberculosis infected macrophages. In: Materials Science and Engineering C .

Sharma, S and Basu, B (2022) Biomaterials assisted reconstructive urology: The pursuit of an implantable bioengineered neo-urinary bladder. In: Biomaterials, 281 .

Sharma, S and Basu, B (2022) Insights into in Situ Compatibilization of Polydimethylsiloxane-Modified Thermoplastic Polyurethanes by Dynamic Crosslinking: Relating Experiments to Predictive Models. In: ACS Applied Polymer Materials, 4 (5). pp. 3752-3769.

Sharma, S and Bhaskar, N and Bose, S and Basu, B (2018) Biomimetic porous high-density polyethylene/polyethylene-grafted-maleic anhydride scaffold with improved in vitro cytocompatibility. In: Journal of Biomaterials Applications, 32 (10). pp. 1450-1463.

Sharma, S and Mandhani, A and Basu, B (2022) Contact-Active Layer-by-Layer Grafted TPU/PDMS Blends as an Antiencrustation and Antibacterial Platform for Next-Generation Urological Biomaterials: Validation in Artificial and Human Urine. In: ACS Biomaterials Science and Engineering .

Sharma, S and Rani, H and Mahesh, Y and Jolly, MK and Dixit, J and Mahadevan, V (2024) Loss of p53 epigenetically modulates epithelial to mesenchymal transition in colorectal cancer. In: Translational Oncology, 43 .

Sharma, V and Bose, S and Kundu, B and Bodhak, S and Mitun, D and Balla, VK and Basu, B (2020) Probing the Influence of ?-Sterilization on the Oxidation, Crystallization, Sliding Wear Resistance, and Cytocompatibility of Chemically Modified Graphene-Oxide-Reinforced HDPE/UHMWPE Nanocomposites and Wear Debris. In: ACS Biomaterials Science and Engineering, 6 (3). pp. 1462-1475.

Sharma, V and Chowdhury, S and Bose, S and Basu, B (2021) Polydopamine Codoped BaTiO3-Functionalized Polyvinylidene Fluoride Coating as a Piezo-Biomaterial Platform for an Enhanced Cellular Response and Bioactivity. In: ACS Biomaterials Science and Engineering .

Sharma, V and Gupta, RK and Kailas, SV and Basu, B (2022) Probing lubricated sliding wear properties of HDPE/UHMWPE hybrid bionanocomposite. In: Journal of Biomaterials Applications .

Shenoy, BM and Hegde, G and Roy Mahapatra, D (2020) Field enhancement in microfluidic semiconductor nanowire array. In: Biomicrofluidics, 14 (6).

Shinde, Aparna and Hardy, Shana D and Kim, Dongwook and Akhand, Saeed Salehin and Jolly, Mohit Kumar and Wang, Wen-Hung and Anderson, Joshua C and Khodadadi, Ryan B and Brown, Wells S and George, Jason T and Liu, Sheng and Wan, Jun and Levine, Herbert and Willey, Christopher D and Krusemark, Casey J and Geahlen, Robert L and Wendt, Michael K (2019) Spleen Tyrosine Kinase-Mediated Autophagy Is Required for Epithelial-Mesenchymal Plasticity and Metastasis in Breast Cancer. In: CANCER RESEARCH, 79 (8). pp. 1831-1843.

Shyam, S and Ramu, S and Sehgal, M and Jolly, MK (2023) A systems-level analysis of the mutually antagonistic roles of RKIP and BACH1 in dynamics of cancer cell plasticity. In: Journal of the Royal Society Interface, 20 (208).

Singh, D and Bocci, F and Kulkarni, P and Jolly, MK (2021) Coupled feedback loops involving PAGE4, EMT and notch signaling can give rise to non-genetic heterogeneity in prostate cancer cells. In: Entropy, 23 (3). pp. 1-16.

Singh, KK and Athira, PJ and Bhardwaj, N and Singh, DP and Watson, U and Saini, DK (2021) Acetylation of Response Regulator Protein MtrA in M. tuberculosis Regulates Its Repressor Activity. In: Frontiers in Microbiology, 11 .

Singh, KK and Singh, DP and Singh, R and Saini, DK (2019) In vitro and in vivo Assessment of Protein Acetylation Status in Mycobacteria. In: Bio-protocol, 9 (13).

Singh, N and Singh, D and Bhide, A and Sharma, R and Sahoo, S and Jolly, MK and Modi, D (2022) Lhx2 in germ cells suppresses endothelial cell migration in the developing ovary. In: Experimental Cell Research, 415 (1).

Singh, Puneet and Lenka, Abhishek and Stezin, Albert and Jhunjhunwala, Ketan and Pal, Pramod Kumar and Ghosal, Ashitava and Murthy, Aditya (2019) Basal ganglia contributions during the learning of a visuomotor rotation: Effect of dopamine, deep brain stimulation and reinforcement. In: EUROPEAN JOURNAL OF NEUROSCIENCE .

Singh, S and Kumbhar, D and Reghu, D and Venugopal, SJ and Rekha, PT and Mohandas, S and Rao, S and Rangaiah, A and Chunchanur, SK and Saini, DK and Umapathy, S (2022) Culture-Independent Raman Spectroscopic Identification of Bacterial Pathogens from Clinical Samples Using Deep Transfer Learning. In: Analytical Chemistry, 94 (42). pp. 14745-14754.

Singh, S and Verma, T and Nandi, D and Umapathy, S (2022) Herbicides 2,4-Dichlorophenoxy Acetic Acid and Glyphosate Induce Distinct Biochemical Changes in E. coli during Phenotypic Antibiotic Resistance: A Raman Spectroscopic Study. In: Journal of Physical Chemistry B .

Singha, MK and Dwivedi, P and Sankhe, G and Patra, A and Rojwal, V (2021) Role of Sensors, Devices and Technology for Detection of COVID-19 Virus. [Book Chapter]

Sirunyan, AM Search for new neutral Higgs bosons through the H � ZA� �+��b b ¯ process in pp collisions at �s = 13 TeV. In: Journal of High Energy Physics, 2020 .

Snijesh, VP and Nimbalkar, VP and Patil, S and Rajarajan, S and Anupama, CE and Mahalakshmi, S and Alexander, A and Soundharya, R and Ramesh, R and Srinath, BS and Jolly, MK and Prabhu, JS (2024) Differential role of glucocorticoid receptor based on its cell type specific expression on tumor cells and infiltrating lymphocytes. In: Translational Oncology, 45 .

Solaimuthu, B and Khatib, A and Tanna, M and Karmi, A and Hayashi, A and Rmaileh, AA and Lichtenstein, M and Takoe, S and Jolly, MK and Shaul, YD (2024) The exostosin glycosyltransferase 1/STAT3 axis is a driver of breast cancer aggressiveness. In: Proceedings of the National Academy of Sciences of the United States of America, 121 (3).

Somarelli, JA and Armstrong, AJ and Sheth, MU and Ware, KE and Jolly, MK (2020) Phenotypic plasticity and lineage switching in prostate cancer. [Book Chapter]

Soni, S and Toley, BJ (2022) Paper-based nucleic acid sample preparation for point-of-care diagnostics. In: Sensors and Actuators B: Chemical, 355 .

Sreepadmanabh, M and Ganesh, M and Bhat, R and Bhattacharjee, T (2023) Jammed microgel growth medium prepared by flash-solidification of agarose for 3D cell culture and 3D bioprinting. In: Biomedical materials (Bristol, England), 18 (4).

Srinivas, M and Sharma, P and Jhunjhunwala, S (2021) Phagocytic Uptake of Polymeric Particles by Immune Cells under Flow Conditions. In: Molecular Pharmaceutics .

Srivastava, P and Singh, C and Joshi, A and Chatterjee, K and Nain, A (2023) MXene: Chemistry, Attributes, and Applications for Electrochemical Energy Storage. [Book Chapter]

Subbalakshmi, AR and Ashraf, B and Jolly, MK (2022) Biophysical and biochemical attributes of hybrid epithelial/mesenchymal phenotypes. In: Physical Biology, 19 (2).

Subbalakshmi, AR and Kundnani, D and Biswas, K and Ghosh, A and Hanash, SM and Tripathi, SC and Jolly, MK (2020) NFATc Acts as a Non-Canonical Phenotypic Stability Factor for a Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Oncology, 10 .

Subbalakshmi, AR and Sahoo, S and Biswas, K and Jolly, MK (2021) A Computational Systems Biology Approach Identifies SLUG as a Mediator of Partial Epithelial-Mesenchymal Transition (EMT). In: Cells Tissues Organs .

Subbalakshmi, AR and Sahoo, S and Manjunatha, P and Goyal, S and Kasiviswanathan, VA and Mahesh, Y and Ramu, S and McMullen, I and Somarelli, JA and Jolly, MK (2023) The ELF3 transcription factor is associated with an epithelial phenotype and represses epithelial-mesenchymal transition. In: Journal of Biological Engineering, 17 (1).

Subbalakshmi, AR and Sahoo, S and McMullen, I and Saxena, AN and Venugopal, SK and Somarelli, JA and Jolly, MK (2021) Klf4 induces mesenchymal�epithelial transition (Met) by suppressing multiple emt�inducing transcription factors. In: Cancers, 13 (20).

Subhadarshini, S and Markus, J and Sahoo, S and Jolly, MK (2023) Dynamics of Epithelial-Mesenchymal Plasticity: What Have Single-Cell Investigations Elucidated So Far? In: ACS Omega, 8 (13). pp. 11665-11673.

Subramanian, PSG and Jain, A and Shivapuji, AM and Sundaresan, NR and Dasappa, S and Rao, L (2020) Plasma-activated water from a dielectric barrier discharge plasma source for the selective treatment of cancer cells. In: Plasma Processes and Polymers, 17 (8).

Sun, Qingyun and Tu, Rong and Xu, Qingfang and Zhang, Chitengfei and Li, Jun and Ohmori, Hitoshi and Kosinova, Marina and Basu, Bikramjit and Yan, Jiasheng and Li, Shusen and Goto, Takashi and Zhang, Lianmeng and Zhang, Song (2019) Nanoforest of 3C-SiC/graphene by laser chemical vapor deposition with high electrochemical performance. In: JOURNAL OF POWER SOURCES, 444 .

Suneet, K and De, T and Rangarajan, A and Jain, S (2020) Magnetic nanofibers based bandage for skin cancer treatment: a non-invasive hyperthermia therapy. In: Cancer Reports, 3 (6).

Suneet, Kaushik and Sridhar, Shreyas and Agiwal, Purvi and Sridhar, Mittanamalli S and Sanyal, Kaustuv and Jain, Shilpee (2019) Magnetic hyperthermia adjunctive therapy for fungi: in vitro studies against Candida albicans. In: INTERNATIONAL JOURNAL OF HYPERTHERMIA, 36 (1). pp. 545-553.

Suresh, M and Bhat, R (2024) Ovarian cancer cells exhibit diverse migration strategies on stiff collagenous substrata. In: Biophysical Journal, 123 (22). pp. 4009-4021.

Surve, Manalee Vishnu and Bhutda, Smita and Datey, Akshay and Anil, Anjali and Rawat, Shalini and Pushpakaran, Athira and Singh, Dipty and Kim, Kwang Sik and Chakravortty, Dipshikha and Banerjee, Anirban (2018) Heterogeneity in pneumolysin expression governs the fate of Streptococcus pneumoniae during blood-brain barrier trafficking. In: PLOS PATHOGENS, 14 (7).

Swain, S and Maithry Shenoy, B and Bhol, P and Yadav, S and Ranjan Jena, S and Hegde, G and Altaee, A and Saxena, M and Samal, AK (2021) Facet dependent catalytic activity of Pd nanocrystals for the remedy of organic Pollutant: A mechanistic study. In: Applied Surface Science, 570 .

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Thakur, C and Tripathi, A and Ravichandran, S and Shivananjaiah, A and Chakraborty, A and Varadappa, S and Chikkavenkatappa, N and Nagarajan, D and Lakshminarasimhaiah, S and Singh, A and Chandra, N (2022) A new blood-based RNA signature (R9), for monitoring effectiveness of tuberculosis treatment in a South Indian longitudinal cohort. In: iScience, 25 (2).

Thangavel, Hariprasad and De Angelis, Carmine and Vasaikar, Suhas and Bhat, Raksha and Jolly, Mohit Kumar and Nagi, Chandandeep and Creighton, Chad J and Chen, Fengju and Dobrolecki, Lacey E and George, Jason T and Kumar, Tanya and Abdulkareem, Noor Mazin and Mao, Sufeng and Nardone, Agostina and Rimawi, Mothaffar and Osborne, C. Kent and Lewis, Michael T and Levine, Herbert and Zhang, Bing and Schiff, Rachel and Giuliano, Mario and Trivedi, Meghana (2019) A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. In: JOURNAL OF CLINICAL MEDICINE, 8 (11).

Thankachan, Jerrin Mathew and Nuthalapati, Stephen Sukumar and Tirumala, Nireekshit Addanki and Ananthanarayanan, Vaishnavi (2017) Fission yeast myosin I facilitates PI(4,5)P-2-mediated anchoring of cytoplasmic dynein to the cortex. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114 (13). E2672-E2681.

Thankamony, AP and Murali, R and Karthikeyan, N and Varghese, BA and Teo, WS and McFarland, A and Roden, DL and Holliday, H and Konrad, CV and Cazet, A and Dodson, E and Yang, J and Baker, LA and George, JT and Levine, H and Jolly, MK and Swarbrick, A and Nair, R (2020) Targeting the id1-kif11 axis in triple-negative breast cancer using combination therapy. In: Biomolecules, 10 (9). pp. 1-15.

Thankamony, AP and Ramkomuth, S and Ramesh, ST and Murali, R and Chakraborty, P and Karthikeyan, N and Varghese, BA and Jaikumar, VS and Jolly, MK and Swarbrick, A and Nair, R (2023) Phenotypic heterogeneity drives differential disease outcome in a mouse model of triple negative breast cancer. In: Frontiers in Oncology, 13 .

Thankamony, AP and Saxena, K and Murali, R and Jolly, MK and Nair, R (2020) Cancer Stem Cell Plasticity � A Deadly Deal. In: Frontiers in Molecular Biosciences, 7 .

Thankamony, AP and Subbalakshmi, AR and Jolly, MK and Nair, R (2021) Lineage plasticity in cancer: The tale of a skin-walker. In: Cancers, 13 (14).

Thapa, BV and Banerjee, M and Glimm, T and Saini, DK and Bhat, R (2024) The senescent mesothelial matrix accentuates colonization by ovarian cancer cells. In: Cellular and Molecular Life Sciences, 81 (1). pp. 1-15.

Thimukonda Jegadeesan, J and Baldia, M and Basu, B (2022) Next-generation personalized cranioplasty treatment. In: Acta Biomaterialia .

Thurakkal, B and Hari, K and Marwaha, R and Karki, S and Jolly, MK and Das, T (2023) Collective heterogeneity of mitochondrial potential in contact inhibition of proliferation. In: Biophysical Journal, 122 (19). 3909 -3923.

Tijore, A and Yang, B and Sheetz, M (2022) Cancer cells can be killed mechanically or with combinations of cytoskeletal inhibitors. In: Frontiers in Pharmacology, 13 .

Tirumala, NA and Ananthanarayanan, V (2020) Role of Dynactin in the Intracellular Localization and Activation of Cytoplasmic Dynein. In: Biochemistry, 59 (2). pp. 156-162.

Tirumala, NA and Ananthanarayanan, V (2023) Visualization of Single Dynein Molecules in Mammalian Cells. In: Methods in molecular biology (Clifton, N.J.), 2623 . pp. 87-93.

Tirumala, NA and Redpath, GMI and Skerhut, SV and Dolai, P and Kapoor-Kaushik, N and Ariotti, N and Vijay Kumar, K and Ananthanarayanan, V (2024) Single-molecule imaging of stochastic interactions that drive dynein activation and cargo movement in cells. In: The Journal of cell biology, 223 (3).

Tiwari, A and Dixit, NM (2023) A physical tug-of-war and the evolution of immune cells. In: Journal of Biosciences, 48 (3).

Tiwari, P and Gosain, TP and Chugh, S and Singh, M and Sankhe, GD and Arora, G and Kidwai, S and Agarwal, S and Saini, DK and Singh, R (2022) Exopolyphosphatases PPX1 and PPX2 from Mycobacterium tuberculosis regulate dormancy response and pathogenesis. In: Microbial Pathogenesis, 173 .

Tiwari, Prabhakar and Gosain, Tannu Priya and Singh, Mamta and Sankhe, Gaurav D and Arora, Garima and Kidwai, Saqib and Agarwal, Sakshi and Chugh, Saurabh and Saini, Deepak K and Singh, Ramandeep (2019) Inorganic polyphosphate accumulation suppresses the dormancy response and virulence in Mycobacterium tuberculosis. In: JOURNAL OF BIOLOGICAL CHEMISTRY, 294 (28). pp. 10819-10832.

Tretyakova, MS and Subbalakshmi, AR and Menyailo, ME and Jolly, MK and Denisov, EV (2022) Tumor Hybrid Cells: Nature and Biological Significance. In: Frontiers in Cell and Developmental Biology, 10 .

Tripathi, M and Narain Singh, D and Srivastava, S and Yadav, NS and Prasad, N and Singh, S and Gaur, R (2022) Electronic Waste Management: An Emerging Challenge to the Environment. [Book Chapter]

Tripathi, S and Chakraborty, P and Levine, H and Jolly, MK (2020) A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. In: PLoS Computational Biology, 16 (2).

Tripathi, S and Levine, H and Jolly, MK (2020) The Physics of Cellular Decision Making during Epithelial-Mesenchymal Transition. [Book Chapter]

Tripathi, S and Xing, J and Levine, H and Jolly, MK (2020) Mathematical modeling of plasticity and heterogeneity in EMT. [Book Chapter]

Tripathi, SC and Jolly, MK and Mani, SA and Levine, H (2021) Editorial: Characterizing the Multi-Faceted Dynamics of Tumor Cell Plasticity. In: Frontiers in Molecular Biosciences, 7 .

Tu, Rong and Hu, Zhiying and Xu, Qingfang and Li, Lin and Yang, Meijun and Li, Qizhong and Shi, Ji and Li, Haiwen and Zhang, Song and Zhang, Lianmeng and Gotoa, Takashi and Ohmori, Hitoshi and Kosinova, Marina and Basu, Bikramjit (2019) Epitaxial growth of 3C-SiC (111) on Si via laser CVD carbonization. In: JOURNAL OF ASIAN CERAMIC SOCIETIES .

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Umesh, Sharath and Pant, Shweta and Padma, Srivani and Jana, Sumitash and Vasudevan, Varsha and Murthy, Aditya and Asokan, Sundarrajan (2019) A novel fiber Bragg grating system for eye tracking. In: JOURNAL OF ADVANCED RESEARCH, 16 . pp. 25-34.

Umrao, S and Anusha, S and Jain, V and Chakraborty, B and Roy, R (2019) Smartphone-based kanamycin sensing with ratiometric FRET. In: RSC Advances, 9 (11). pp. 6143-6151.

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Vadlamudi, G and Thirumalaikumaran, SK and Chakravortty, D and Saha, A and Basu, S (2022) Penetration and aerosolization of cough droplet spray through face masks: A unique pathway of transmission of infection. In: Physics of Fluids, 34 (5).

Vaiwala, R and Ayappa, KG (2021) A generic force field for simulating native protein structures using dissipative particle dynamics. In: Soft Matter, 17 (42). pp. 9772-9785.

Vaiwala, R and Sharma, P and Puranik, M and Ayappa, KG (2020) Developing a Coarse-Grained Model for Bacterial Cell Walls: Evaluating Mechanical Properties and Free Energy Barriers. In: Journal of Chemical Theory and Computation, 16 (8). pp. 5369-5384.

Valloly, P and Roy, R (2022) Nucleic Acid Quantification with Amplicon Yield in Recombinase Polymerase Amplification. In: Analytical Chemistry, 94 (40). pp. 13897-13905.

Varadarajan, V and Desikan, R and Ayappa, KG (2020) Assessing the extent of the structural and dynamic modulation of membrane lipids due to pore forming toxins: Insights from molecular dynamics simulations. In: Soft Matter, 16 (20). pp. 4840-4857.

Varadharajaperumal, S and Alagarasan, D and Sripan, C and Ganesan, R and Satyanarayan, MN and Hegde, G (2021) Toxic-free surface level sulphur doped 1D Ti-Ox-Sy nanorods for superstrate heterojunction CZTS thin-film solar cells. In: Materials Research Bulletin, 133 .

Varadharajaperumal, S and Alagarasan, Devarajan and Ganesan, R and Satyanarayan, M N and Hegde, Gopalkrishna (2020) Controlled growth of 1D-ZnO nanotubes using one-step hot plate technique for CZTS heterojunction solar cells. In: MATERIALS SCIENCE IN SEMICONDUCTOR PROCESSING, 106 .

Varadharajaperumal, S and Ilango, Murugaiya Sridar and Hegde, Gopalkrishna and Satyanarayan, M N (2019) Effect of CuPc and PEDOT:PSS as hole transport layers in planar heterojunction CdS/CdTe solar cell. In: MATERIALS RESEARCH EXPRESS, 6 (9).

Varghese, A and Ray, S and Verma, T and Nandi, D (2020) Multicellular String-Like Structure Formation by Salmonella Typhimurium Depends on Cellulose Production: Roles of Diguanylate Cyclases, YedQ and YfiN. In: Frontiers in Microbiology, 11 .

Varsha, V and Murthy, A and Padhi, R (2021) A Stochastic Optimal Control Model with Internal Feedback and Velocity Tracking for Saccadic Eye Movements. In: Biomedical Signal Processing and Control, 68 .

Vasudevan, V and Gopal, A and Jana, S and Padhi, R and Murthy, A (2023) Velocity tracking control best explains the modulation of saccade kinematics during eye–hand coordination. In: European Journal of Neuroscience .

Vasudevan, V and Murthy, A and Padhi, R (2024) Modeling kinematic variability reveals displacement and velocity based dual control of saccadic eye movements. In: Experimental Brain Research, 242 (9). 2159 -2176.

Vemparala, B and Parambathu, AV and Saini, DK and Dixit, NM (2022) An Evolutionary Paradigm Favoring Cross Talk between Bacterial Two-Component Signaling Systems. In: mSystems, 7 (6).

Venkatasubramanian, G and Kelkar, DA and Mandal, S and Jolly, MK and Kulkarni, M (2022) Analysis of Yes-Associated Protein-1 (YAP1) Target Gene Signature to Predict Progressive Breast Cancer. In: Journal of Clinical Medicine, 11 (7).

Venkatesh, SR and Gupta, A and Singh, V (2023) Amphid sensory neurons of Caenorhabditis elegans orchestrate its survival from infection with broad classes of pathogens. In: Life Science Alliance, 6 (8).

Vennettilli, M and Saha, S and Roy, U and Mugler, A (2021) Precision of Protein Thermometry. In: Physical Review Letters, 127 (9).

Verma, S and Toley, BJ (2024) Saturation Equation: An Analytical Expression for Partial Saturation during Wicking Flow in Paper Microfluidic Channels. In: Langmuir .

Verma, T and Annappa, H and Singh, S and Umapathy, S and Nandi, D (2020) Profiling antibiotic resistance in Escherichia coli strains displaying differential antibiotic susceptibilities using Raman spectroscopy. In: Journal of Biophotonics . (In Press)

Verma, T and Annappa, H and Singh, S and Umapathy, S and Nandi, D (2021) Profiling antibiotic resistance in Escherichia coli strains displaying differential antibiotic susceptibilities using Raman spectroscopy. In: Journal of Biophotonics, 14 (1).

Verma, T and Majumdar, S and Yadav, S and Ahmed, SM and Umapathy, S and Nandi, D (2021) Cell-free hemoglobin is a marker of systemic inflammation in mouse models of sepsis: A Raman spectroscopic study. In: Analyst, 146 (12). pp. 4022-4032.