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Tripathi, S and Xing, J and Levine, H and Jolly, MK (2020) Mathematical modeling of plasticity and heterogeneity in EMT. [Book Chapter]
Somarelli, JA and Armstrong, AJ and Sheth, MU and Ware, KE and Jolly, MK (2020) Phenotypic plasticity and lineage switching in prostate cancer. [Book Chapter]
Kulkarni, P and Nathan, A and Salgia, R and Rangarajan, G and Jolly, MK (2020) Phenotypic switching and prostate diseases: a model proposing a causal link between benign prostatic hyperplasia and prostate cancer. [Book Chapter]
Jia, D and Jolly, MK and Levine, H and Onuchic, JN (2020) Epithelial-mesenchymal transition in cancer. [Book Chapter]
Levine, H and Jolly, MK and Kulkarni, P and Nanjundiah, V (2020) Phenotypic Switching: Implications in Biology and Medicine. [Book Chapter]
Tripathi, S and Levine, H and Jolly, MK (2020) The Physics of Cellular Decision Making during Epithelial-Mesenchymal Transition. [Book Chapter]
Sahoo, S and Subbalakshmi, AR and Jolly, MK (2020) The fundamentals of phenotypic plasticity. [Book Chapter]
Yang, Y and Jolly, MK and Levine, H (2019) Computational Modeling of Collective Cell Migration: Mechanical and Biochemical Aspects. [Book Chapter]
Roy, U and Collins, T and Jolly, MK and Katira, P (2012) Biophysical and Biochemical Mechanisms Underlying Collective Cell Migration in Cancer Metastasis. [Book Chapter]
Najafi, A and Jolly, MK and George, JT (2024) Protocol for inferring epithelial-to-mesenchymal transition trajectories from single-cell RNA sequencing data using R. In: STAR Protocols, 5 (1).
Catalanotto, M and Vaz, JM and Abshire, C and Youngblood, R and Chu, M and Levine, H and Jolly, MK and Dragoi, A-M (2024) Dual role of CASP8AP2/FLASH in regulating epithelial-to-mesenchymal transition plasticity (EMP). In: Translational Oncology, 39 .
Sehgal, M and Ramu, S and Vaz, JM and Ganapathy, YR and Muralidharan, S and Venkatraghavan, S and Jolly, MK (2024) Characterizing heterogeneity along EMT and metabolic axes in colorectal cancer reveals underlying consensus molecular subtype-specific trends. In: Translational Oncology, 40 .
Sharma, S and Rani, H and Mahesh, Y and Jolly, MK and Dixit, J and Mahadevan, V (2024) Loss of p53 epigenetically modulates epithelial to mesenchymal transition in colorectal cancer. In: Translational Oncology, 43 .
Sehgal, M and Nayak, SP and Sahoo, S and Somarelli, JA and Jolly, MK (2024) Mutually exclusive teams-like patterns of gene regulation characterize phenotypic heterogeneity along the noradrenergic-mesenchymal axis in neuroblastoma. In: Cancer Biology and Therapy, 25 (1).
BV, H and Jolly, MK (2024) Proneural-mesenchymal antagonism dominates the patterns of phenotypic heterogeneity in glioblastoma. In: iScience, 27 (3).
Sahu, S and Sahoo, S and Sullivan, T and O'Sullivan, TN and Turan, S and Albaugh, ME and Burkett, S and Tran, B and Salomon, DS and Kozlov, SV and Koehler, KR and Jolly, MK and Sharan, SK (2024) Spatiotemporal modulation of growth factors directs the generation of multilineage mouse embryonic stem cell-derived mammary organoids. In: Developmental Cell, 59 (2). 175-186.e8.
Solaimuthu, B and Khatib, A and Tanna, M and Karmi, A and Hayashi, A and Rmaileh, AA and Lichtenstein, M and Takoe, S and Jolly, MK and Shaul, YD (2024) The exostosin glycosyltransferase 1/STAT3 axis is a driver of breast cancer aggressiveness. In: Proceedings of the National Academy of Sciences of the United States of America, 121 (3).
Adhikary, R and Roy, A and Jolly, MK and Das, D (2023) Effects of microRNA-mediated negative feedback on gene expression noise. In: Biophysical Journal, 122 (21). pp. 4220-4240.
Rajarajan, S and Snijesh, VP and Anupama, CE and Nair, MG and Mavatkar, AD and Naidu, CM and Patil, S and Nimbalkar, VP and Alexander, A and Pillai, M and Jolly, MK and Sabarinathan, R and Ramesh, RS and BS, S and Prabhu, JS (2023) An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers. In: Translational Oncology, 37 .
Thurakkal, B and Hari, K and Marwaha, R and Karki, S and Jolly, MK and Das, T (2023) Collective heterogeneity of mitochondrial potential in contact inhibition of proliferation. In: Biophysical Journal, 122 (19). 3909 -3923.
Thankamony, AP and Ramkomuth, S and Ramesh, ST and Murali, R and Chakraborty, P and Karthikeyan, N and Varghese, BA and Jaikumar, VS and Jolly, MK and Swarbrick, A and Nair, R (2023) Phenotypic heterogeneity drives differential disease outcome in a mouse model of triple negative breast cancer. In: Frontiers in Oncology, 13 .
Sengupta, S and Singh, N and Paul, A and Datta, D and Chatterjee, D and Mukherjee, S and Gadhe, L and Devi, J and Mahesh, Y and Jolly, MK and Maji, SK (2023) p53 amyloid pathology is correlated with higher cancer grade irrespective of the mutant or wild-type form. In: Journal of Cell Science, 136 (17).
Sehgal, M and Ray, R and Vaz, JM and Kanikar, S and Somarelli, JA and Jolly, MK (2023) Partial EMT and associated changes in cellular plasticity in oncovirus-positive samples. In: Advances in Cancer Biology - Metastasis, 7 .
Najafi, A and Jolly, MK and George, JT (2023) Population dynamics of EMT elucidates the timing and distribution of phenotypic intra-tumoral heterogeneity. In: iScience, 26 (7).
Kunjar, S and Strandburg-Peshkin, A and Giese, H and Minasandra, P and Sarkar, S and Jolly, MK and Gradwohl, N (2023) Link updating strategies influence consensus decisions as a function of the direction of communication. In: Royal Society Open Science, 10 (6).
Ware, KE and Thomas, BC and Olawuni, PD and Sheth, MU and Hawkey, N and Yeshwanth, M and Miller, BC and Vietor, KJ and Jolly, MK and Kim, SY and Armstrong, AJ and Somarelli, JA (2023) A synthetic lethal screen for Snail-induced enzalutamide resistance identifies JAK/STAT signaling as a therapeutic vulnerability in prostate cancer. In: Frontiers in Molecular Biosciences, 10 .
Hedrich, V and Breitenecker, K and Ortmayr, G and Pupp, F and Huber, H and Chen, D and Sahoo, S and Jolly, MK and Mikulits, W (2023) PRAME Is a Novel Target of Tumor-Intrinsic Gas6/Axl Activation and Promotes Cancer Cell Invasion in Hepatocellular Carcinoma. In: Cancers, 15 (9).
Kumar, R and Dhaka, B and Sahoo, S and Jolly, MK and Sabarinathan, R (2023) Prognostic association of immunoproteasome expression in solid tumours is governed by the immediate immune environment. In: Molecular Oncology .
Pillai, M and Hojel, E and Jolly, MK and Goyal, Y (2023) Unraveling non-genetic heterogeneity in cancer with dynamical models and computational tools. In: Nature Computational Science, 3 (4). pp. 301-313.
Subhadarshini, S and Markus, J and Sahoo, S and Jolly, MK (2023) Dynamics of Epithelial-Mesenchymal Plasticity: What Have Single-Cell Investigations Elucidated So Far? In: ACS Omega, 8 (13). pp. 11665-11673.
Subbalakshmi, AR and Sahoo, S and Manjunatha, P and Goyal, S and Kasiviswanathan, VA and Mahesh, Y and Ramu, S and McMullen, I and Somarelli, JA and Jolly, MK (2023) The ELF3 transcription factor is associated with an epithelial phenotype and represses epithelial-mesenchymal transition. In: Journal of Biological Engineering, 17 (1).
Jindal, R and Nanda, A and Pillai, M and Ware, KE and Singh, D and Sehgal, M and Armstrong, AJ and Somarelli, JA and Jolly, MK (2023) Emergent dynamics of underlying regulatory network links EMT and androgen receptor-dependent resistance in prostate cancer. In: Computational and Structural Biotechnology Journal, 21 . 1498 – 1509.
Roy, U and Singh, D and Vincent, N and Haritas, CK and Jolly, MK (2023) Spatiotemporal Patterning Enabled by Gene Regulatory Networks. In: ACS Omega .
Kar, A and Medatwal, N and Rajput, K and Mandal, S and Pani, T and Khan, A and Sharma, P and Oberoi, AS and Vishwakarma, G and Deo, SVS and Jolly, MK and Bajaj, A and Dasgupta, U (2023) Unique sphingolipid signature identifies luminal and triple-negative breast cancer subtypes. In: International Journal of Cancer .
Hari, K and Harlapur, P and Gopalan, A and Ullanat, V and Duddu, AS and Jolly, MK (2022) Emergent properties of coupled bistable switches. In: Journal of Biosciences, 47 (4).
Harlapur, P and Duddu, AS and Hari, K and Kulkarni, P and Jolly, MK (2022) Functional Resilience of Mutually Repressing Motifs Embedded in Larger Networks. In: Biomolecules, 12 (12).
Pillai, M and Chen, Z and Jolly, MK and Li, C (2022) Quantitative landscapes reveal trajectories of cell-state transitions associated with drug resistance in melanoma. In: iScience, 25 (12).
Aggarwal, V and Sahoo, S and Donnenberg, VS and Chakraborty, P and Jolly, MK and Sant, S (2022) P4HA2: A link between tumor-intrinsic hypoxia, partial EMT and collective migration. In: Advances in Cancer Biology - Metastasis, 5 .
Sahoo, S and Mishra, A and Diehl, AM and Jolly, MK (2022) Dynamics of hepatocyte-cholangiocyte cell-fate decisions during liver development and regeneration. In: iScience, 25 (9).
Jia, W and Duddu, AS and Jolly, MK and Levine, H (2022) Lack of Correlation between Landscape Geometry and Transition Rates. In: Journal of Physical Chemistry B, 126 (30). pp. 5613-5618.
Pillai, M and Rajaram, G and Thakur, P and Agarwal, N and Muralidharan, S and Ray, A and Barbhaya, D and Somarelli, JA and Jolly, MK (2022) Mapping phenotypic heterogeneity in melanoma onto the epithelial-hybrid-mesenchymal axis. In: Frontiers in Oncology, 12 .
Navalkar, A and Paul, A and Sakunthala, A and Pandey, S and Dey, AK and Saha, S and Sahoo, S and Jolly, MK and Maiti, TK and Maji, SK (2022) Oncogenic gain of function due to p53 amyloids occurs through aberrant alteration of cell cycle and proliferation. In: Journal of cell science, 135 (15).
Brown, MS and Abdollahi, B and Wilkins, OM and Lu, H and Chakraborty, P and Ognjenovic, NB and Muller, KE and Jolly, MK and Christensen, BC and Hassanpour, S and Pattabiraman, DR (2022) Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer. In: Science Advances, 8 (31).
Saxena, K and Subbalakshmi, AR and Kulkarni, P and Jolly, MK (2022) Cancer: More than a geneticist’s Pandora’s box. In: Journal of Biosciences, 47 (2).
Deb, S and Bhandary, S and Sinha, SK and Jolly, MK and Dutta, PS (2022) Identifying critical transitions in complex diseases. In: Journal of Biosciences, 47 (2).
Singh, N and Singh, D and Bhide, A and Sharma, R and Sahoo, S and Jolly, MK and Modi, D (2022) Lhx2 in germ cells suppresses endothelial cell migration in the developing ovary. In: Experimental Cell Research, 415 (1).
Biswas, K and Jolly, MK and Ghosh, A (2022) Mean residence times of TF-TF and TF-miRNA toggle switches. In: Journal of Biosciences, 47 (2).
Naik, HC and Hari, K and Chandel, D and Jolly, MK and Gayen, S (2022) Single-cell analysis reveals X upregulation is not global in pre-gastrulation embryos. In: iScience, 25 (6).
Foo, J and Basanta, D and Rockne, RC and Strelez, C and Shah, C and Ghaffarian, K and Mumenthaler, SM and Mitchell, K and Lathia, JD and Frankhouser, D and Branciamore, S and Kuo, Y-H and Marcucci, G and Velde, RV and Marusyk, A and Huang, S and Hari, K and Jolly, MK and Hatzikirou, H and Poels, KE and Spilker, ME and Shtylla, B and Robertson-Tessi, M and Anderson, ARA (2022) Roadmap on plasticity and epigenetics in cancer. In: Physical Biology, 19 (3).
Venkatasubramanian, G and Kelkar, DA and Mandal, S and Jolly, MK and Kulkarni, M (2022) Analysis of Yes-Associated Protein-1 (YAP1) Target Gene Signature to Predict Progressive Breast Cancer. In: Journal of Clinical Medicine, 11 (7).
Masuda, H and Harano, K and Miura, S and Wang, Y and Hirota, Y and Harada, O and Jolly, MK and Matsunaga, Y and Lim, B and Wood, AL and Parinyanitikul, N and Lee, HJ and Gong, G and George, JT and Levine, H and Lee, J and Wang, X and Lucci, A and Rao, A and Schweitzer, BL and Lawrence, OR and Seitz, RS and Morris, SW and Hout, DR and Nakamura, S and Krishnamurthy, S and Ueno, NT (2022) Changes in Triple-Negative Breast Cancer Molecular Subtypes in Patients Without Pathologic Complete Response After Neoadjuvant Systemic Chemotherapy. In: JCO Precision Oncology, 6 .
Vilchez Mercedes, SA and Bocci, F and Ahmed, M and Eder, I and Zhu, N and Levine, H and Onuchic, JN and Jolly, MK and Wong, PK (2022) Nrf2 Modulates the Hybrid Epithelial/Mesenchymal Phenotype and Notch Signaling During Collective Cancer Migration. In: Frontiers in Molecular Biosciences, 9 .
Subbalakshmi, AR and Ashraf, B and Jolly, MK (2022) Biophysical and biochemical attributes of hybrid epithelial/mesenchymal phenotypes. In: Physical Biology, 19 (2).
Monavarian, M and Elhaw, AT and Tang, PW and Javed, Z and Shonibare, Z and Scalise, CB and Arend, R and Jolly, MK and Sewell- Loftin, MK and Hempel, N and Mythreye, K (2022) Emerging perspectives on growth factor metabolic relationships in the ovarian cancer ascites environment. In: Seminars in Cancer Biology .
Parthasarathi, KTS and Mandal, S and Singh, S and Gundimeda, S and Jolly, MK and Pandey, A and Sharma, J (2022) In Silico Analysis of Ion Channels and Their Correlation with Epithelial to Mesenchymal Transition in Breast Cancer. In: Cancers, 14 (6).
Kulkarni, P and Bhattacharya, S and Achuthan, S and Behal, A and Jolly, MK and Kotnala, S and Mohanty, A and Rangarajan, G and Salgia, R and Uversky, V (2022) Intrinsically Disordered Proteins: Critical Components of the Wetware. In: Chemical Reviews, 122 (6). pp. 6614-6633.
Jolly, MK and Murphy, RJ and Bhatia, S and Whitfield, HJ and Redfern, A and Davis, MJ and Thompson, EW (2022) Measuring and Modelling the Epithelial- Mesenchymal Hybrid State in Cancer: Clinical Implications. In: Cells Tissues Organs, 211 (2). 110 -133.
Saxena, K and Srikrishnan, S and Celia-Terrassa, T and Jolly, MK (2022) OVOL1/2: Drivers of Epithelial Differentiation in Development, Disease, and Reprogramming. In: Cells Tissues Organs, 211 (2). 183 -192.
Patkulkar, PA and Subbalakshmi, AR and Jolly, MK and Sinharay, S (2022) Mapping Spatiotemporal Heterogeneity in Tumor Profiles by Integrating High-Throughput Imaging and Omics Analysis. In: ACS Omega .
Muralidharan, S and Sahoo, S and Saha, A and Chandran, S and Majumdar, SS and Mandal, S and Levine, H and Jolly, MK (2022) Quantifying the Patterns of Metabolic Plasticity and Heterogeneity along the Epithelial–Hybrid–Mesenchymal Spectrum in Cancer. In: Biomolecules, 12 (2).
Tretyakova, MS and Subbalakshmi, AR and Menyailo, ME and Jolly, MK and Denisov, EV (2022) Tumor Hybrid Cells: Nature and Biological Significance. In: Frontiers in Cell and Developmental Biology, 10 .
Mandal, S and Tejaswi, T and Janivara, R and Srikrishnan, S and Thakur, P and Sahoo, S and Chakraborty, P and Sohal, SS and Levine, H and George, JT and Jolly, MK (2022) Transcriptomic-based quantification of the epithelial-hybrid-mesenchymal spectrum across biological contexts. In: Biomolecules, 12 (1).
Johnson, KS and Hussein, S and Chakraborty, P and Muruganantham, A and Mikhail, S and Gonzalez, G and Song, S and Jolly, MK and Toneff, MJ and Benton, ML and Lin, YC and Taube, JH (2022) CTCF expression and dynamic motif accessibility modulates epithelial�mesenchymal gene expression. In: Cancers, 14 (1).
Nam, A and Mohanty, A and Bhattacharya, S and Kotnala, S and Achuthan, S and Hari, K and Srivastava, S and Guo, L and Nathan, A and Chatterjee, R and Jain, M and Nasser, MW and Batra, SK and Rangarajan, G and Massarelli, E and Levine, H and Jolly, MK and Kulkarni, P and Salgia, R (2022) Dynamic phenotypic switching and group behavior help non-small cell lung cancer cells evade chemotherapy. In: Biomolecules, 12 (1).
Sahoo, S and Ashraf, B and Duddu, AS and Biddle, A and Jolly, MK (2022) Interconnected high-dimensional landscapes of epithelial�mesenchymal plasticity and stemness in cancer. In: Clinical and Experimental Metastasis .
Jia, W and Jolly, MK and Levine, H (2022) NRF2-dependent Epigenetic Regulation can Promote the Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Cell and Developmental Biology, 9 .
Jain, P and Bhatia, S and Thompson, EW and Jolly, MK (2022) Population Dynamics of Epithelial�Mesenchymal Heterogeneity in Cancer Cells. In: Biomolecules, 12 (3).
Khumukcham, SS and Penugurti, V and Soni, A and Uppala, V and Hari, K and Jolly, MK and Dwivedi, A and Salam PK, A and Padala, C and Mukta, S and Bhopal, T and Manavathi, B (2022) A reciprocal feedback loop between HIF-1α and HPIP controls phenotypic plasticity in breast cancer cells. In: Cancer Letters, 526 . pp. 12-28.
Sahoo, S and Nayak, SP and Hari, K and Purkait, P and Mandal, S and Kishore, A and Levine, H and Jolly, MK (2021) Immunosuppressive Traits of the Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Immunology, 12 .
Pasani, S and Sahoo, S and Jolly, MK (2021) Hybrid E/M phenotype(S) and stemness: A mechanistic connection embedded in network topology. In: Journal of Clinical Medicine, 10 (1). pp. 1-19.
Biswas, K and Jolly, MK and Ghosh, A (2021) First passage time properties of miRNA-mediated protein translation. In: Journal of Theoretical Biology, 529 .
Subbalakshmi, AR and Sahoo, S and McMullen, I and Saxena, AN and Venugopal, SK and Somarelli, JA and Jolly, MK (2021) Klf4 induces mesenchymal�epithelial transition (Met) by suppressing multiple emt�inducing transcription factors. In: Cancers, 13 (20).
Pramanik, D and Jolly, MK and Bhat, R (2021) Matrix adhesion and remodeling diversifies modes of cancer invasion across spatial scales. In: Journal of Theoretical Biology, 524 .
Vilchez Mercedes, SA and Bocci, F and Levine, H and Onuchic, JN and Jolly, MK and Wong, PK (2021) Decoding leader cells in collective cancer invasion. In: Nature Reviews Cancer .
Sahoo, S and Mishra, A and Kaur, H and Hari, K and Muralidharan, S and Mandal, S and Jolly, MK (2021) A mechanistic model captures the emergence and implications of non-genetic heterogeneity and reversible drug resistance in ER+ breast cancer cells. In: NAR Cancer, 3 (3).
Roy, N and Kshattry, M and Mandal, S and Jolly, MK and Bhattacharyya, DK and Barah, P (2021) An integrative systems biology approach identifies molecular signatures associated with gallbladder cancer pathogenesis. In: Journal of Clinical Medicine, 10 (16).
Thankamony, AP and Subbalakshmi, AR and Jolly, MK and Nair, R (2021) Lineage plasticity in cancer: The tale of a skin-walker. In: Cancers, 13 (14).
Jia, D and Park, JH and Kaur, H and Jung, KH and Yang, S and Tripathi, S and Galbraith, M and Deng, Y and Jolly, MK and Kaipparettu, BA and Onuchic, JN and Levine, H (2021) Towards decoding the coupled decision-making of metabolism and epithelial-to-mesenchymal transition in cancer. In: British Journal of Cancer .
Wang, P and Zhou, R and Thomas, P and Zhao, L and Zhou, R and Mandal, S and Jolly, MK and Richard, DJ and Rehm, BHA and Ostrikov, K and Dai, X and Williams, ED and Thompson, EW (2021) Epithelial-to-mesenchymal transition enhances cancer cell sensitivity to cytotoxic effects of zcold atmospheric plasmas in breast and bladder cancer systems. In: Cancers, 13 (12).
Deshmukh, AP and Vasaikar, SV and Tomczak, K and Tripathi, S and Den Hollander, P and Arslan, E and Chakraborty, P and Soundararajan, R and Jolly, MK and Rai, K and Levine, H and Mani, SA (2021) Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencing. In: Proceedings of the National Academy of Sciences of the United States of America, 118 (19).
Hati, S and Duddu, AS and Jolly, MK (2021) Operating principles of circular toggle polygons. In: Physical Biology, 18 (4).
Deng, Y and Chakraborty, P and Jolly, MK and Levine, H (2021) A theoretical approach to coupling the epithelial-mesenchymal transition (Emt) to extracellular matrix (ecm) stiffness via loxl2. In: Cancers, 13 (7).
Chakraborty, P and George, JT and Woodward, WA and Levine, H and Jolly, MK (2021) Gene expression profiles of inflammatory breast cancer reveal high heterogeneity across the epithelial-hybrid-mesenchymal spectrum. In: Translational Oncology, 14 (4).
Bhattacharya, S and Mohanty, A and Achuthan, S and Kotnala, S and Jolly, MK and Kulkarni, P and Salgia, R (2021) Group Behavior and Emergence of Cancer Drug Resistance. In: Trends in Cancer, 7 (4). pp. 323-334.
Singh, D and Bocci, F and Kulkarni, P and Jolly, MK (2021) Coupled feedback loops involving PAGE4, EMT and notch signaling can give rise to non-genetic heterogeneity in prostate cancer cells. In: Entropy, 23 (3). pp. 1-16.
Chauhan, L and Ram, U and Hari, K and Jolly, MK (2021) Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer. In: eLife, 10 .
Klionsky, DJ and Abdel-Aziz, AK and Abdelfatah, S and Abdellatif, M and Abdoli, A and Abel, S and Abeliovich, H and Abildgaard, MH and Abudu, YP and Acevedo-Arozena, A and Adamopoulos, IE and Adeli, K and Adolph, TE and Adornetto, A and Aflaki, E and Agam, G and Agarwal, A and Aggarwal, BB and Agnello, M and Agostinis, P and Agrewala, JN and Agrotis, A and Aguilar, PV and Ahmad, ST and Ahmed, ZM and Ahumada-Castro, U and Aits, S and Aizawa, S and Akkoc, Y and Akoumianaki, T and Akpinar, HA and Al-Abd, AM and Al-Akra, L and Al-Gharaibeh, A and Alaoui-Jamali, MA and Alberti, S and Alcocer-Gómez, E and Alessandri, C and Ali, M and Alim Al-Bari, MA and Aliwaini, S and Alizadeh, J and Almacellas, E and Almasan, A and Alonso, A and Alonso, GD and Altan-Bonnet, N and Altieri, DC and Ã�lvarez, Ã�MC and Alves, S and Alves da Costa, C and Alzaharna, MM and Amadio, M and Amantini, C and Amaral, C and Ambrosio, S and Amer, AO and Ammanathan, V and An, Z and Andersen, SU and Andrabi, SA and Andrade-Silva, M and Andres, AM and Angelini, S and Ann, D and Anozie, UC and Ansari, MY and Antas, P and Antebi, A and Antón, Z and Anwar, T and Apetoh, L and Apostolova, N and Araki, T and Araki, Y and Arasaki, K and Araújo, WL and Araya, J and Arden, C and Arévalo, M-A and Arguelles, S and Arias, E and Arikkath, J and Arimoto, H and Ariosa, AR and Armstrong-James, D and Arnauné-Pelloquin, L and Aroca, A and Arroyo, DS and Arsov, I and Artero, R and Asaro, DML and Aschner, M and Ashrafizadeh, M and Ashur-Fabian, O and Atanasov, AG and Au, AK and Auberger, P and Auner, HW and Aurelian, L and Autelli, R and Avagliano, L and Ã�valos, Y and Aveic, S and Aveleira, CA and Avin-Wittenberg, T and Aydin, Y and Ayton, S and Ayyadevara, S and Azzopardi, M and Baba, M and Backer, JM and Backues, SK and Bae, D-H and Bae, O-N and Bae, SH and Baehrecke, EH and Baek, A and Baek, S-H and Baek, SH and Bagetta, G and Bagniewska-Zadworna, A and Bai, H and Bai, J and Bai, X and Bai, Y and Bairagi, N and Baksi, S and Balbi, T and Baldari, CT and Balduini, W and Ballabio, A and Ballester, M and Balazadeh, S and Balzan, R and Bandopadhyay, R and Banerjee, S and Banerjee, S and Bánréti, Ã� and Bao, Y and Baptista, MS and Baracca, A and Barbati, C and Bargiela, A and BarilÃ, D and Barlow, PG and Barmada, SJ and Barreiro, E and Barreto, GE and Bartek, J and Bartel, B and Bartolome, A and Barve, GR and Basagoudanavar, SH and Bassham, DC and Bast, Jr and Basu, A and Batoko, H and Batten, I and Baulieu, EE and Baumgarner, BL and Bayry, J and Beale, R and Beau, I and Beaumatin, F and Bechara, LRG and Beck, Jr and Beers, MF and Begun, J and Behrends, C and Behrens, GMN and Bei, R and Bejarano, E and Bel, S and Behl, C and Belaid, A and Belgareh-Touzé, N and Bellarosa, C and Belleudi, F and Belló Pérez, M and Bello-Morales, R and Beltran, JSDO and Beltran, S and Benbrook, DM and Bendorius, M and Benitez, BA and Benito-Cuesta, I and Bensalem, J and Berchtold, MW and Berezowska, S and Bergamaschi, D and Bergami, M and Bergmann, A and Berliocchi, L and Berlioz-Torrent, C and Bernard, A and Berthoux, L and Besirli, CG and Besteiro, S and Betin, VM and Beyaert, R and Bezbradica, JS and Bhaskar, K and Bhatia-Kissova, I and Bhattacharya, R and Bhattacharya, S and Bhattacharyya, S and Bhuiyan, MS and Bhutia, SK and Bi, L and Bi, X and Biden, TJ and Bijian, K and Billes, VA and Binart, N and Bincoletto, C and Birgisdottir, AB and Bjorkoy, G and Blanco, G and Blas-Garcia, A and Blasiak, J and Blomgran, R and Blomgren, K and Blum, JS and Boada-Romero, E and Boban, M and Boesze-Battaglia, K and Boeuf, P and Boland, B and Bomont, P and Bonaldo, P and Bonam, SR and Bonfili, L and Bonifacino, JS and Boone, BA and Bootman, MD and Bordi, M and Borner, C and Bornhauser, BC and Borthakur, G and Bosch, J and Bose, S and Botana, LM and Botas, J and Boulanger, CM and Boulton, ME and Bourdenx, M and Bourgeois, B and Bourke, NM and Bousquet, G and Boya, P and Bozhkov, PV and Bozi, LHM and Bozkurt, TO and Brackney, DE and Brandts, CH and Braun, RJ and Braus, GH and Bravo-Sagua, R and Bravo-San Pedro, JM and Brest, P and Bringer, M-A and Briones-Herrera, A and Broaddus, VC and Brodersen, P and Brodsky, JL and Brody, SL and Bronson, PG and Bronstein, JM and Brown, CN and Brown, RE and Brum, PC and Brumell, JH and Brunetti-Pierri, N and Bruno, D and Bryson-Richardson, RJ and Bucci, C and Buchrieser, C and Bueno, M and Buitrago-Molina, LE and Buraschi, S and Buch, S and Buchan, JR and Buckingham, EM and Budak, H and Budini, M and Bultynck, G and Burada, F and Burgoyne, JR and Burón, MI and Bustos, V and Büttner, S and Butturini, E and Byrd, A and Cabas, I and Cabrera-Benitez, S and Cadwell, K and Cai, J and Cai, L and Cai, Q and Cairó, M and Calbet, JA and Caldwell, GA and Caldwell, KA and Call, JA and Calvani, R and Calvo, AC and Calvo-Rubio Barrera, M and Camara, NOS and Camonis, JH and Camougrand, N and Campanella, M and Campbell, EM and Campbell-Valois, F-X and Campello, S and Campesi, I and Campos, JC and Camuzard, O and Cancino, J and Candido de Almeida, D and Canesi, L and Caniggia, I and Canonico, B and CantÃ, C and Cao, B and Caraglia, M and Caramés, B and Carchman, EH and Cardenal-Muñoz, E and Cardenas, C and Cardenas, L and Cardoso, SM and Carew, JS and Carle, GF and Carleton, G and Carloni, S and Carmona-Gutierrez, D and Carneiro, LA and Carnevali, O and Carosi, JM and Carra, S and Carrier, A and Carrier, L and Carroll, B and Carter, AB and Carvalho, AN and Casanova, M and Casas, C and Casas, J and Cassioli, C and Castillo, EF and Castillo, K and Castillo-Lluva, S and Castoldi, F and Castori, M and Castro, AF and Castro-Caldas, M and Castro-Hernandez, J and Castro-Obregon, S and Catz, SD and Cavadas, C and Cavaliere, F and Cavallini, G and Cavinato, M and Cayuela, ML and Cebollada Rica, P and Cecarini, V and Cecconi, F and Cechowska-Pasko, M and Cenci, S and Ceperuelo-Mallafré, V and Cerqueira, JJ and Cerutti, JM and Cervia, D and Cetintas, VB and Cetrullo, S and Chae, H-J and Chagin, AS and Chai, C-Y and Chakrabarti, G and Chakrabarti, O and Chakraborty, T and Chakraborty, T and Chami, M and Chamilos, G and Chan, DW and Chan, EYW and Chan, ED and Chan, HYE and Chan, HH and Chan, H and Chan, MTV and Chan, YS and Chandra, PK and Chang, C-P and Chang, C and Chang, H-C and Chang, K and Chao, J and Chapman, T and Charlet-Berguerand, N and Chatterjee, S and Chaube, SK and Chaudhary, A and Chauhan, S and Chaum, E and Checler, F and Cheetham, ME and Chen, C-S and Chen, G-C and Chen, J-F and Chen, LL and Chen, L and Chen, L and Chen, M and Chen, M-K and Chen, N and Chen, Q and Chen, R-H and Chen, S and Chen, W and Chen, W and Chen, X-M and Chen, X-W and Chen, X and Chen, Y and Chen, Y-G and Chen, Y and Chen, Y and Chen, Y-J and Chen, Y-Q and Chen, ZS and Chen, Z and Chen, Z-H and Chen, ZJ and Chen, Z and Cheng, H and Cheng, J and Cheng, S-Y and Cheng, W and Cheng, X and Cheng, X-T and Cheng, Y and Cheng, Z and Chen, Z and Cheong, H and Cheong, JK and Chernyak, BV and Cherry, S and Cheung, CFR and Cheung, CHA and Cheung, K-H and Chevet, E and Chi, RJ and Chiang, AKS and Chiaradonna, F and Chiarelli, R and Chiariello, M and Chica, N and Chiocca, S and Chiong, M and Chiou, S-H and Chiramel, AI and Chiurchiù, V and Cho, D-H and Choe, S-K and Choi, AMK and Choi, ME and Choudhury, KR and Chow, NS and Chu, CT and Chua, JP and Chua, JJE and Chung, H and Chung, KP and Chung, S and Chung, S-H and Chung, Y-L and Cianfanelli, V and Ciechomska, IA and Cifuentes, M and Cinque, L and Cirak, S and Cirone, M and Clague, MJ and Clarke, R and Clementi, E and Coccia, EM and Codogno, P and Cohen, E and Cohen, MM and Colasanti, T and Colasuonno, F and Colbert, RA and Colell, A and Ä�oliÄ�, M and Coll, NS and Collins, MO and Colombo, MI and Colón-Ramos, DA and Combaret, L and Comincini, S and Cominetti, MR and Consiglio, A and Conte, A and Conti, F and Contu, VR and Cookson, MR and Coombs, KM and Coppens, I and Corasaniti, MT and Corkery, DP and Cordes, N and Cortese, K and Costa, MDC and Costantino, S and Costelli, P and Coto-Montes, A and Crack, PJ and Crespo, JL and Criollo, A and Crippa, V and Cristofani, R and Csizmadia, T and Cuadrado, A and Cui, B and Cui, J and Cui, Y and Cui, Y and Culetto, E and Cumino, AC and Cybulsky, AV and Czaja, MJ and Czuczwar, SJ and Dâ��Adamo, S and Dâ��Amelio, M and Dâ��Arcangelo, D and Dâ��Lugos, AC and Dâ��Orazi, G and da Silva, JA and Dafsari, HS and Dagda, RK and Dagdas, Y and Daglia, M and Dai, X and Dai, Y and Dai, Y and Dal Col, J and Dalhaimer, P and Dalla Valle, L and Dallenga, T and Dalmasso, G and Damme, M and Dando, I and Dantuma, NP and Darling, AL and Das, H and Dasarathy, S and Dasari, SK and Dash, S and Daumke, O and Dauphinee, AN and Davies, JS and Dávila, VA and Davis, RJ and Davis, T and Dayalan Naidu, S and De Amicis, F and De Bosscher, K and De Felice, F and De Franceschi, L and De Leonibus, C and de Mattos Barbosa, MG and De Meyer, GRY and De Milito, A and De Nunzio, C and De Palma, C and De Santi, M and De Virgilio, C and De Zio, D and Debnath, J and DeBosch, BJ and Decuypere, J-P and Deehan, MA and Deflorian, G and DeGregori, J and Dehay, B and Del Rio, G and Delaney, JR and Delbridge, LMD and Delorme-Axford, E and Delpino, MV and Demarchi, F and Dembitz, V and Demers, ND and Deng, H and Deng, Z and Dengjel, J and Dent, P and Denton, D and DePamphilis, ML and Der, CJ and Deretic, V and Descoteaux, A and Devis, L and Devkota, S and Devuyst, O and Dewson, G and Dharmasivam, M and Dhiman, R and di Bernardo, D and Di Cristina, M and Di Domenico, F and Di Fazio, P and Di Fonzo, A and Di Guardo, G and Di Guglielmo, GM and Di Leo, L and Di Malta, C and Di Nardo, A and Di Rienzo, M and Di Sano, F and Diallinas, G and Diao, J and Diaz-Araya, G and DÃaz-Laviada, I and Dickinson, JM and Diederich, M and Dieudé, M and Dikic, I and Ding, S and Ding, W-X and Dini, L and DiniÄ�, J and Dinic, M and Dinkova-Kostova, AT and Dionne, MS and Distler, JHW and Diwan, A and Dixon, IMC and Djavaheri-Mergny, M and Dobrinski, I and Dobrovinskaya, O and Dobrowolski, R and Dobson, RCJ and Ä�okiÄ�, J and Dokmeci Emre, S and Donadelli, M and Dong, B and Dong, X and Dong, Z and Dorn II, GW and Dotsch, V and Dou, H and Dou, J and Dowaidar, M and Dridi, S and Drucker, L and Du, A and Du, C and Du, G and Du, H-N and Du, L-L and du Toit, A and Duan, S-B and Duan, X and Duarte, SP and Dubrovska, A and Dunlop, EA and Dupont, N and Durán, RV and Dwarakanath, BS and Dyshlovoy, SA and Ebrahimi-Fakhari, D and Eckhart, L and Edelstein, CL and Efferth, T and Eftekharpour, E and Eichinger, L and Eid, N and Eisenberg, T and Eissa, NT and Eissa, S and Ejarque, M and El Andaloussi, A and El-Hage, N and El-Naggar, S and Eleuteri, AM and El-Shafey, ES and Elgendy, M and Eliopoulos, AG and Elizalde, MM and Elks, PM and Elsasser, H-P and Elsherbiny, ES and Emerling, BM and Emre, NCT and Eng, CH and Engedal, N and Engelbrecht, A-M and Engelsen, AST and Enserink, JM and Escalante, R and Esclatine, A and Escobar-Henriques, M and Eskelinen, E-L and Espert, L and Eusebio, M-O and Fabrias, G and Fabrizi, C and Facchiano, A and Facchiano, F and Fadeel, B and Fader, C and Faesen, AC and Fairlie, WD and Falcó, A and Falkenburger, BH and Fan, D and Fan, J and Fan, Y and Fang, EF and Fang, Y and Fang, Y and Fanto, M and Farfel-Becker, T and Faure, M and Fazeli, G and Fedele, AO and Feldman, AM and Feng, D and Feng, J and Feng, L and Feng, Y and Feng, Y and Feng, W and Fenz Araujo, T and Ferguson, TA and Fernández, Ã�F and Fernandez-Checa, JC and Fernández-Veledo, S and Fernie, AR and Ferrante, Jr and Ferraresi, A and Ferrari, MF and Ferreira, JCB and Ferro-Novick, S and Figueras, A and Filadi, R and Filigheddu, N and Filippi-Chiela, E and Filomeni, G and Fimia, GM and Fineschi, V and Finetti, F and Finkbeiner, S and Fisher, EA and Fisher, PB and Flamigni, F and Fliesler, SJ and Flo, TH and Florance, I and Florey, O and Florio, T and Fodor, E and Follo, C and Fon, EA and Forlino, A and Fornai, F and Fortini, P and Fracassi, A and Fraldi, A and Franco, B and Franco, R and Franconi, F and Frankel, LB and Friedman, SL and Fröhlich, LF and Frühbeck, G and Fuentes, JM and Fujiki, Y and Fujita, N and Fujiwara, Y and Fukuda, M and Fulda, S and Furic, L and Furuya, N and Fusco, C and Gack, MU and Gaffke, L and Galadari, S and Galasso, A and Galindo, MF and Gallolu Kankanamalage, S and Galluzzi, L and Galy, V and Gammoh, N and Gan, B and Ganley, IG and Gao, F and Gao, H and Gao, M and Gao, P and Gao, S-J and Gao, W and Gao, X and Garcera, A and Garcia, MN and Garcia, VE and GarcÃa-Del Portillo, F and Garcia-Escudero, V and Garcia-Garcia, A and Garcia-Macia, M and GarcÃa-Moreno, D and Garcia-Ruiz, C and GarcÃa-Sanz, P and Garg, AD and Gargini, R and Garofalo, T and Garry, RF and Gassen, NC and Gatica, D and Ge, L and Ge, W and Geiss-Friedlander, R and Gelfi, C and Genschik, P and Gentle, IE and Gerbino, V and Gerhardt, C and Germain, K and Germain, M and Gewirtz, DA and Ghasemipour Afshar, E and Ghavami, S and Ghigo, A and Ghosh, M and Giamas, G and Giampietri, C and Giatromanolaki, A and Gibson, GE and Gibson, SB and Ginet, V and Giniger, E and Giorgi, C and Girao, H and Girardin, SE and Giridharan, M and Giuliano, S and Giulivi, C and Giuriato, S and Giustiniani, J and Gluschko, A and Goder, V and Goginashvili, A and Golab, J and Goldstone, DC and Golebiewska, A and Gomes, LR and Gomez, R and Gómez-Sánchez, R and Gomez-Puerto, MC and Gomez-Sintes, R and Gong, Q and Goni, FM and González-Gallego, J and Gonzalez-Hernandez, T and Gonzalez-Polo, RA and Gonzalez-Reyes, JA and González-RodrÃguez, P and Goping, IS and Gorbatyuk, MS and Gorbunov, NV and Görgülü, K and Gorojod, RM and Gorski, SM and Goruppi, S and Gotor, C and Gottlieb, RA and Gozes, I and Gozuacik, D and Graef, M and Gräler, MH and Granatiero, V and Grasso, D and Gray, JP and Green, DR and Greenhough, A and Gregory, SL and Griffin, EF and Grinstaff, MW and Gros, F and Grose, C and Gross, AS and Gruber, F and Grumati, P and Grune, T and Gu, X and Guan, J-L and Guardia, CM and Guda, K and Guerra, F and Guerri, C and Guha, P and Guillén, C and Gujar, S and Gukovskaya, A and Gukovsky, I and Gunst, J and Günther, A and Guntur, AR and Guo, C and Guo, C and Guo, H and Guo, L-W and Guo, M and Gupta, P and Gupta, SK and Gupta, S and Gupta, VB and Gupta, V and Gustafsson, AB and Gutterman, DD and HB, R and Haapasalo, A and Haber, JE and HaÄ�, A and Hadano, S and Hafrén, AJ and Haidar, M and Hall, BS and Halldén, G and Hamacher-Brady, A and Hamann, A and Hamasaki, M and Han, W and Hansen, M and Hanson, PI and Hao, Z and Harada, M and Harhaji-Trajkovic, L and Hariharan, N and Haroon, N and Harris, J and Hasegawa, T and Hasima Nagoor, N and Haspel, JA and Haucke, V and Hawkins, WD and Hay, BA and Haynes, CM and Hayrabedyan, SB and Hays, TS and He, C and He, Q and He, R-R and He, Y-W and He, Y-Y and Heakal, Y and Heberle, AM and Hejtmancik, JF and Helgason, GV and Henkel, V and Herb, M and Hergovich, A and Herman-Antosiewicz, A and Hernández, A and Hernandez, C and Hernandez-Diaz, S and Hernandez-Gea, V and Herpin, A and Herreros, J and Hervás, JH and Hesselson, D and Hetz, C and Heussler, VT and Higuchi, Y and Hilfiker, S and Hill, JA and Hlavacek, WS and Ho, EA and Ho, IHT and Ho, PW-L and Ho, S-L and Ho, WY and Hobbs, GA and Hochstrasser, M and Hoet, PHM and Hofius, D and Hofman, P and Höhn, A and Holmberg, CI and Hombrebueno, JR and Yi-Ren Hong, C-WH and Hooper, LV and Hoppe, T and Horos, R and Hoshida, Y and Hsin, I-L and Hsu, H-Y and Hu, B and Hu, D and Hu, L-F and Hu, MC and Hu, R and Hu, W and Hu, Y-C and Hu, Z-W and Hua, F and Hua, J and Hua, Y and Huan, C and Huang, C and Huang, C and Huang, C and Huang, C and Huang, H and Huang, K and Huang, MLH and Huang, R and Huang, S and Huang, T and Huang, X and Huang, YJ and Huber, TB and Hubert, V and Hubner, CA and Hughes, SM and Hughes, WE and Humbert, M and Hummer, G and Hurley, JH and Hussain, S and Hussain, S and Hussey, PJ and Hutabarat, M and Hwang, H-Y and Hwang, S and Ieni, A and Ikeda, F and Imagawa, Y and Imai, Y and Imbriano, C and Imoto, M and Inman, DM and Inoki, K and Iovanna, J and Iozzo, RV and Ippolito, G and Irazoqui, JE and Iribarren, P and Ishaq, M and Ishikawa, M and Ishimwe, N and Isidoro, C and Ismail, N and Issazadeh-Navikas, S and Itakura, E and Ito, D and Ivankovic, D and Ivanova, S and Iyer, AKV and Izquierdo, JM and Izumi, M and Jäättelä, M and Jabir, MS and Jackson, WT and Jacobo-Herrera, N and Jacomin, A-C and Jacquin, E and Jadiya, P and Jaeschke, H and Jagannath, C and Jakobi, AJ and Jakobsson, J and Janji, B and Jansen-Dürr, P and Jansson, PJ and Jantsch, J and Januszewski, S and Jassey, A and Jean, S and Jeltsch-David, H and Jendelova, P and Jenny, A and Jensen, TE and Jessen, N and Jewell, JL and Ji, J and Jia, L and Jia, R and Jiang, L and Jiang, Q and Jiang, R and Jiang, T and Jiang, X and Jiang, Y and Jimenez-Sanchez, M and Jin, E-J and Jin, F and Jin, H and Jin, L and Jin, L and Jin, M and Jin, S and Jo, E-K and Joffre, C and Johansen, T and Johnson, GVW and Johnston, SA and Jokitalo, E and Jolly, MK and Joosten, LAB and Jordan, J and Joseph, B and Ju, D and Ju, J-S and Ju, J and Juárez, E and Judith, D and Juhász, G and Jun, Y and Jung, CH and Jung, S-C and Jung, YK and Jungbluth, H and Jungverdorben, J and Just, S and Kaarniranta, K and Kaasik, A and Kabuta, T and Kaganovich, D and Kahana, A and Kain, R and Kajimura, S and Kalamvoki, M and Kalia, M and Kalinowski, DS and Kaludercic, N and Kalvari, I and Kaminska, J and Kaminskyy, VO and Kanamori, H and Kanasaki, K and Kang, C and Kang, R and Kang, SS and Kaniyappan, S and Kanki, T and Kanneganti, T-D and Kanthasamy, AG and Kanthasamy, A and Kantorow, M and Kapuy, O and Karamouzis, MV and Karim, MR and Karmakar, P and Katare, RG and Kato, M and Kaufmann, SHE and Kauppinen, A and Kaushal, GP and Kaushik, S and Kawasaki, K and Kazan, K and Ke, P-Y and Keating, DJ and Keber, U and Kehrl, JH and Keller, KE and Keller, CW and Kemper, JK and Kenific, CM and Kepp, O and Kermorgant, S and Kern, A and Ketteler, R and Keulers, TG and Khalfin, B and Khalil, H and Khambu, B and Khan, SY and Khandelwal, VKM and Khandia, R and Kho, W and Khobrekar, NV and Khuansuwan, S and Khundadze, M and Killackey, SA and Kim, D and Kim, DR and Kim, D-H and Kim, D-E and Kim, EY and Kim, E-K and Kim, H-R and Kim, H-S and Kim, Hyung-Ryong and Kim, JH and Kim, JK and Kim, J-H and Kim, J and Kim, JH and Kim, KI and Kim, PK and Kim, S-J and Kimball, SR and Kimchi, A and Kimmelman, AC and Kimura, T and King, MA and Kinghorn, KJ and Kinsey, CG and Kirkin, V and Kirshenbaum, LA and Kiselev, SL and Kishi, S and Kitamoto, K and Kitaoka, Y and Kitazato, K and Kitsis, RN and Kittler, JT and Kjaerulff, O and Klein, PS and Klopstock, T and Klucken, J and Knævelsrud, H and Knorr, RL and Ko, BCB and Ko, F and Ko, J-L and Kobayashi, H and Kobayashi, S and Koch, I and Koch, JC and Koenig, U and Kögel, D and Koh, YH and Koike, M and Kohlwein, SD and Kocaturk, NM and Komatsu, M and König, J and Kono, T and Kopp, BT and Korcsmaros, T and Korkmaz, G and Korolchuk, VI and Korsnes, MS and Koskela, A and Kota, J and Kotake, Y and Kotler, ML and Kou, Y and Koukourakis, MI and Koustas, E and Kovacs, AL and Kovács, T and Koya, D and Kozako, T and Kraft, C and Krainc, D and Krämer, H and Krasnodembskaya, AD and Kretz-Remy, C and Kroemer, G and Ktistakis, NT and Kuchitsu, K and Kuenen, S and Kuerschner, L and Kukar, T and Kumar, A and Kumar, A and Kumar, D and Kumar, D and Kumar, S and Kume, S and Kumsta, C and Kundu, CN and Kundu, M and Kunnumakkara, AB and Kurgan, L and Kutateladze, TG and Kutlu, O and Kwak, S and Kwon, HJ and Kwon, TK and Kwon, YT and Kyrmizi, I and La Spada, A and Labonté, P and Ladoire, S and Laface, I and Lafont, F and Lagace, DC and Lahiri, V and Lai, Z and Laird, AS and Lakkaraju, A and Lamark, T and Lan, S-H and Landajuela, A and Lane, DJR and Lane, JD and Lang, CH and Lange, C and Langel, Ã� and Langer, R and Lapaquette, P and Laporte, J and LaRusso, NF and Lastres-Becker, I and Lau, WCY and Laurie, GW and Lavandero, S and Law, BYK and Law, HK-W and Layfield, R and Le, W and Le Stunff, H and Leary, AY and Lebrun, J-J and Leck, LYW and Leduc-Gaudet, J-P and Lee, C and Lee, C-P and Lee, D-H and Lee, EB and Lee, EF and Lee, GM and Lee, H-J and Lee, HK and Lee, JM and Lee, JS and Lee, J-A and Lee, J-Y and Lee, JH and Lee, M and Lee, MG and Lee, MJ and Lee, M-S and Lee, SY and Lee, S-J and Lee, SY and Lee, SB and Lee, WH and Lee, Y-R and Lee, Y-H and Lee, Y and Lefebvre, C and Legouis, R and Lei, YL and Lei, Y and Leikin, S and Leitinger, G and Lemus, L and Leng, S and Lenoir, O and Lenz, G and Lenz, HJ and Lenzi, P and León, Y and Leopoldino, AM and Leschczyk, C and Leskelä, S and Letellier, E and Leung, C-T and Leung, PS and Leventhal, JS and Levine, B and Lewis, PA and Ley, K and Li, B and Li, D-Q and Li, J and Li, J and Li, J and Li, K and Li, L and Li, M and Li, M and Li, M and Li, M and Li, M and Li, P-L and Li, M-Q and Li, Q and Li, S and Li, T and Li, W and Li, W and Li, X and Li, Y-P and Li, Y and Li, Z and Li, Z and Li, Z and Lian, J and Liang, C and Liang, Q and Liang, W and Liang, Y and Liang, Y and Liao, G and Liao, L and Liao, M and Liao, Y-F and Librizzi, M and Lie, PPY and Lilly, MA and Lim, HJ and Lima, TRR and Limana, F and Lin, C and Lin, C-W and Lin, D-S and Lin, F-C and Lin, JD and Lin, KM and Lin, K-H and Lin, L-T and Lin, P-H and Lin, Q and Lin, S and Lin, S-J and Lin, W and Lin, X and Lin, Y-X and Lin, Y-S and Linden, R and Lindner, P and Ling, S-C and Lingor, P and Linnemann, AK and Liou, Y-C and Lipinski, MM and LipovÅ¡ek, S and Lira, VA and Lisiak, N and Liton, PB and Liu, C and Liu, C-H and Liu, C-F and Liu, CH and Liu, F and Liu, H and Liu, H-S and Liu, H-F and Liu, H and Liu, J and Liu, J and Liu, J and Liu, L and Liu, L and Liu, M and Liu, Q and Liu, W and Liu, W and Liu, X-H and Liu, X and Liu, X and Liu, X and Liu, X and Liu, Y and Liu, Y and Liu, Y and Liu, Y and Liu, Y and Livingston, JA and Lizard, G and Lizcano, JM and Ljubojevic-Holzer, S and LLeonart, ME and Llobet-Navà s, D and Llorente, A and Lo, CH and Lobato-Márquez, D and Long, Q and Long, YC and Loos, B and Loos, JA and López, MG and López-Doménech, G and López-Guerrero, JA and López-Jiménez, AT and López-Pérez, Ã� and López-Valero, I and Lorenowicz, MJ and Lorente, M and Lorincz, P and Lossi, L and Lotersztajn, S and Lovat, PE and Lovell, JF and Lovy, A and LÅ�w, P and Lu, G and Lu, H and Lu, J-H and Lu, J-J and Lu, M and Lu, S and Luciani, A and Lucocq, JM and Ludovico, P and Luftig, MA and Luhr, M and Luis-Ravelo, D and Lum, JJ and Luna-Dulcey, L and Lund, AH and Lund, VK and Lünemann, JD and Lüningschrör, P and Luo, H and Luo, R and Luo, S and Luo, Z and Luparello, C and Lüscher, B and Luu, L and Lyakhovich, A and Lyamzaev, KG and Lystad, AH and Lytvynchuk, L and Ma, AC and Ma, C and Ma, M and Ma, N-F and Ma, Q-H and Ma, X and Ma, Y and Ma, Z and MacDougald, OA and Macian, F and MacIntosh, GC and MacKeigan, JP and Macleod, KF and Maday, S and Madeo, F and Madesh, M and Madl, T and Madrigal-Matute, J and Maeda, A and Maejima, Y and Magarinos, M and Mahavadi, P and Maiani, E and Maiese, K and Maiti, P and Maiuri, MC and Majello, B and Major, MB and Makareeva, E and Malik, F and Mallilankaraman, K and Malorni, W and Maloyan, A and Mammadova, N and Man, GCW and Manai, F and Mancias, JD and Mandelkow, E-M and Mandell, MA and Manfredi, AA and Manjili, MH and Manjithaya, R and Manque, P and Manshian, BB and Manzano, R and Manzoni, C and Mao, K and Marchese, C and Marchetti, S and Marconi, AM and Marcucci, F and Mardente, S and Mareninova, OA and Margeta, M and Mari, M and Marinelli, S and Marinelli, O and Mariño, G and Mariotto, S and Marshall, RS and Marten, MR and Martens, S and Martin, APJ and Martin, KR and Martin, S and Martin, S and MartÃn-Segura, A and MartÃn-Acebes, MA 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D and Sebti, S and Sedej, S and Segatori, L and Segev, N and Seglen, PO and Seiliez, I and Seki, E and Selleck, SB and Sellke, FW and Selsby, JT and Sendtner, M and Senturk, S and Seranova, E and Sergi, C and Serra-Moreno, R and Sesaki, H and Settembre, C and Setty, SRG and Sgarbi, G and Sha, O and Shacka, JJ and Shah, JA and Shang, D and Shao, C and Shao, F and Sharbati, S and Sharkey, LM and Sharma, D and Sharma, G and Sharma, K and Sharma, P and Sharma, S and Shen, H-M and Shen, H and Shen, J and Shen, M and Shen, W and Shen, Z and Sheng, R and Sheng, Z and Sheng, Z-H and Shi, J and Shi, X and Shi, Y-H and Shiba-Fukushima, K and Shieh, J-J and Shimada, Y and Shimizu, S and Shimozawa, M and Shintani, T and Shoemaker, CJ and Shojaei, S and Shoji, I and Shravage, BV and Shridhar, V and Shu, C-W and Shu, H-B and Shui, K and Shukla, AK and Shutt, TE and Sica, V and Siddiqui, A and Sierra, A and Sierra-Torre, V and Signorelli, S and Sil, P and Silva, BJDA and Silva, JD and Silva-Pavez, E 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and Wang, Y and Wang, Y-Y and Wang, Y and Wang, Y and Wang, Y and Wang, Y and Wang, Z and Wang, Z and Wang, Z and Warnes, G and Warnsmann, V and Watada, H and Watanabe, E and Watchon, M and WawrzyÅ�ska, A and Weaver, TE and Wegrzyn, G and Wehman, AM and Wei, H and Wei, L and Wei, T and Wei, Y and Weiergräber, OH and Weihl, CC and Weindl, G and Weiskirchen, R and Wells, A and Wen, RH and Wen, X and Werner, A and Weykopf, B and Wheatley, SP and Whitton, JL and Whitworth, AJ and Wiktorska, K and Wildenberg, ME and Wileman, T and Wilkinson, S and Willbold, D and Williams, B and Williams, RSB and Williams, RL and Williamson, PR and Wilson, RA and Winner, B and Winsor, NJ and Witkin, SS and Wodrich, H and Woehlbier, U and Wollert, T and Wong, E and Wong, JH and Wong, RW and Wong, VKW and Wong, WW-L and Wu, A-G and Wu, C and Wu, J and Wu, J and Wu, KK and Wu, M and Wu, S-Y and Wu, S and Wu, S-Y and Wu, S and Wu, WKK and Wu, X and Wu, X and Wu, Y-W and Wu, Y and Xavier, RJ and Xia, H and Xia, 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and Tong, C-K (2021) Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1. In: Autophagy, 17 (1). pp. 1-382.
Chedere, A and Hari, K and Kumar, S and Rangarajan, A and Jolly, MK (2021) Multi-stability and consequent phenotypic plasticity in AMPK-Akt double negative feedback loop in cancer cells. In: Journal of Clinical Medicine, 10 (3). pp. 1-16.
Iyer, A and Gupta, K and Sharma, S and Hari, K and Lee, YF and Ramalingam, N and Yap, YS and West, J and Bhagat, AA and Subramani, BV and Sabuwala, B and Tan, TZ and Thiery, JP and Jolly, MK and Ramalingam, N and Sengupta, D (2021) Integrative analysis and machine learning based characterization of single circulating tumor cells. In: Journal of Clinical Medicine, 9 (4). pp. 1-2.
Norgard, RJ and Pitarresi, JR and Maddipati, R and Aiello-Couzo, NM and Balli, D and Li, J and Yamazoe, T and Wengyn, MD and Millstein, ID and Folkert, IW and Rosario-Berrios, DN and Kim, I-K and Bassett, JB and Payne, R and Berry, CT and Feng, X and Sun, K and Cioffi, M and Chakraborty, P and Jolly, MK and Gutkind, JS and Lyden, D and Freedman, BD and Foskett, JK and Rustgi, AK and Stanger, BZ (2021) Calcium signaling induces a partial EMT. In: EMBO Reports .
Subbalakshmi, AR and Sahoo, S and Biswas, K and Jolly, MK (2021) A Computational Systems Biology Approach Identifies SLUG as a Mediator of Partial Epithelial-Mesenchymal Transition (EMT). In: Cells Tissues Organs .
Pathak, S and Jolly, MK and Nandi, D (2021) Countries with high deaths due to flu and tuberculosis demonstrate lower COVID-19 mortality: roles of vaccinations. In: Human Vaccines and Immunotherapeutics .
Kulkarni, P and Achuthan, S and Bhattacharya, S and Jolly, MK and Kotnala, S and Leite, VBP and Mohanty, A and Orban, J and Roy, S and Rangarajan, G and Salgia, R (2021) Protein conformational dynamics and phenotypic switching. In: Biophysical Reviews .
Naik, HC and Hari, K and Chandel, D and Mandal, S and Jolly, MK and Gayen, S (2021) Semicoordinated allelic-bursting shape dynamic random monoallelic expression in pregastrulation embryos. In: iScience, 24 (9).
Pillai, M and Jolly, MK (2021) Systems-level network modeling deciphers the master regulators of phenotypic plasticity and heterogeneity in melanoma. In: iScience, 24 (10).
Hari, K and Sabuwala, B and Subramani, BV and La Porta, CAM and Zapperi, S and Font-Clos, F and Jolly, MK (2020) Identifying inhibitors of epithelial–mesenchymal plasticity using a network topology-based approach. In: npj Systems Biology and Applications, 6 (1).
Saxena, K and Jolly, MK and Balamurugan, K (2020) Hypoxia, partial EMT and collective migration: Emerging culprits in metastasis. In: Translational Oncology, 13 (11).
Sahoo, S and Jhunjhunwala, S and Jolly, MK (2020) The Good, The Bad and The Ugly: A Mathematical Model Investigates the Differing Outcomes Among CoVID-19 Patients. In: Journal of the Indian Institute of Science . (In Press)
Thankamony, AP and Murali, R and Karthikeyan, N and Varghese, BA and Teo, WS and McFarland, A and Roden, DL and Holliday, H and Konrad, CV and Cazet, A and Dodson, E and Yang, J and Baker, LA and George, JT and Levine, H and Jolly, MK and Swarbrick, A and Nair, R (2020) Targeting the id1-kif11 axis in triple-negative breast cancer using combination therapy. In: Biomolecules, 10 (9). pp. 1-15.
Kaur, T and Sarkar, S and Chowdhury, S and Sinha, SK and Jolly, MK and Dutta, PS (2020) Anticipating the Novel Coronavirus Disease (COVID-19) Pandemic. In: Frontiers in Public Health, 8 .
Duddu, AS and Sahoo, S and Hati, S and Jhunjhunwala, S and Jolly, MK (2020) Multi-stability in cellular differentiation enabled by a network of three mutually repressing master regulators: Multi-stability in cellular differentiation enabled by a network of three mutually repressing master regulators. In: Journal of the Royal Society Interface, 17 (170).
Subbalakshmi, AR and Kundnani, D and Biswas, K and Ghosh, A and Hanash, SM and Tripathi, SC and Jolly, MK (2020) NFATc Acts as a Non-Canonical Phenotypic Stability Factor for a Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Oncology, 10 .
Mohanty, A and Nam, A and Pozhitkov, A and Yang, L and Srivastava, S and Nathan, A and Wu, X and Mambetsariev, I and Nelson, M and Subbalakshmi, AR and Guo, L and Nasser, MW and Batra, SK and Orban, J and Jolly, MK and Massarelli, E and Kulkarni, P and Salgia, R (2020) A Non-genetic Mechanism Involving the Integrin β4/Paxillin Axis Contributes to Chemoresistance in Lung Cancer. In: iScience, 23 (9).
Bocci, F and Onuchic, JN and Jolly, MK (2020) Understanding the Principles of Pattern Formation Driven by Notch Signaling by Integrating Experiments and Theoretical Models. In: Frontiers in Physiology, 11 .
Ranganathan, S and Kumar, S and Mohanty, SS and Jolly, MK and Rangarajan, A (2020) Cellular Plasticity in Matrix-attached and -Detached Cells: Implications in Metastasis. In: Journal of the Indian Institute of Science, 100 (3). pp. 525-536.
Khot, M and Sreekumar, D and Jahagirdar, S and Kulkarni, A and Hari, K and Faseela, EE and Sabarinathan, R and Jolly, MK and Sengupta, K (2020) Twist1 induces chromosomal instability (CIN) in colorectal cancer cells. In: Human molecular genetics, 29 (10). pp. 1673-1688.
Dhadve, AC and Hari, K and Rekhi, B and Jolly, MK and De, A and Ray, P (2020) Decoding molecular interplay between RUNX1 and FOXO3a underlying the pulsatile IGF1R expression during acquirement of chemoresistance. In: Biochimica et Biophysica Acta - Molecular Basis of Disease, 1866 (6).
Jolly, MK and Celia-Terrassa, T (2020) Insights into the multi-dimensional dynamic landscape of epithelial-mesenchymal plasticity through inter-disciplinary approaches. In: Journal of Clinical Medicine, 9 (6).
Thankamony, AP and Saxena, K and Murali, R and Jolly, MK and Nair, R (2020) Cancer Stem Cell Plasticity � A Deadly Deal. In: Frontiers in Molecular Biosciences, 7 .
Chakraborty, P and George, JT and Tripathi, S and Levine, H and Jolly, MK (2020) Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum. In: Frontiers in Bioengineering and Biotechnology, 8 .
Sahoo, S and Singh, D and Chakraborty, P and Jolly, MK (2020) Emergent properties of the HNF4Α-pparγ network may drive consequent phenotypic plasticity in NAFLD. In: Journal of Clinical Medicine, 9 (3).
Drapela, S and Bouchal, J and Jolly, MK and Culig, Z and SouÄek, K (2020) ZEB1: A Critical Regulator of Cell Plasticity, DNA Damage Response, and Therapy Resistance. In: Frontiers in Molecular Biosciences, 7 .
Tripathi, S and Chakraborty, P and Levine, H and Jolly, MK (2020) A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. In: PLoS Computational Biology, 16 (2).
Lourenco, AR and Ban, Y and Crowley, MJ and Lee, SB and Ramchandani, D and Du, W and Elemento, O and George, JT and Jolly, MK and Levine, H and Sheng, J and Wong, ST and Altorki, NK and Gao, D (2020) Differential contributions of pre- And post-EMT tumor cells in breast cancer metastasis. In: Cancer Research, 80 (2). pp. 163-169.
Lourenco, AR and Ban, Y and Crowley, MJ and Lee, SB and Ramchandani, D and Du, W and Elemento, O and George, JT and Jolly, MK and Levine, H and Sheng, J and Wong, ST and Altorki, NK and Gao, D (2020) Differential contributions of pre- And post-EMT tumor cells in breast cancer metastasis. In: Cancer Research, 80 (2). pp. 163-169.
Sarkar, S and Sinha, SK and Levine, H and Jolly, MK and Dutta, PS (2019) Anticipating critical transitions in epithelial-hybrid-mesenchymal cell-fate determination. In: Proceedings of the National Academy of Sciences of the United States of America, 116 (52). pp. 26343-26352.
Jolly, MK and Ware, KE and Xu, S and Gilja, S and Shetler, S and Yang, Y and Wang, X and Austin, RG and Runyambo, D and Hish, AJ and DeWitt, SB and George, JT and Kreulen, RT and Boss, M-K and Lazarides, AL and Kerr, DL and Gerber, DG and Sivaraj, D and Armstrong, AJ and Dewhirst, MW and Eward, WC and Levine, H and Somarelli, JA (2019) E-cadherin represses anchorage-independent growth in sarcomas through both signaling and mechanical mechanisms. In: Molecular Cancer Research, 17 (6). pp. 1391-1402.
Lin, X and Kulkarni, P and Bocci, F and Schafer, NP and Roy, S and Tsai, MY and He, Y and Chen, Y and Rajagopalan, K and Mooney, SM and Zeng, Y and Weninger, K and Grishaev, A and Onuchic, JN and Levine, H and Wolynes, PG and Salgia, R and Rangarajan, G and Uversky, V and Orban, J and Jolly, MK (2019) Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level. In: Biomolecules, 9 (2).
Xu, S and Ware, KE and Ding, Y and Kim, SY and Sheth, MU and Rao, S and Chan, W and Armstrong, AJ and Eward, WC and Jolly, MK and Somarelli, JA (2019) An integrative systems biology and experimental approach identifies convergence of epithelial plasticity, metabolism, and autophagy to promote chemoresistance. In: Journal of Clinical Medicine, 8 (2).
Biswas, K and Jolly, MK and Ghosh, A (2019) Stability and mean residence times for hybrid epithelial/mesenchymal phenotype. In: Physical Biology, 16 (2).
Culig, Z and Jolly, MK and Souček, K (2023) Editorial: Heterogeneity and plasticity of prostate cancer. In: Frontiers in Molecular Biosciences, 10 .
Mattei, F and Jolly, MK (2023) Interdisciplinary research in cancer and immunity employing biophysical approaches. In: iScience, 26 (5).
Adler, FR and Anderson, ARA and Bhushan, A and Bogdan, P and Bravo-Cordero, JJ and Brock, A and Chen, Y and Cukierman, E and DelGiorno, KE and Denis, GV and Ferrall-Fairbanks, MC and Gartner, ZJ and Germain, RN and Gordon, DM and Hunter, G and Jolly, MK and Karacosta, LG and Mythreye, K and Katira, P and Kulkarni, RP and Kutys, ML and Lander, AD and Laughney, AM and Levine, H and Lou, E and Lowenstein, PR and Masters, KS and Pe'er, D and Peyton, SR and Platt, MO and Purvis, JE and Quon, G and Richer, JK and Riddle, NC and Rodriguez, A and Snyder, JC and Lee Szeto, G and Tomlin, CJ and Yanai, I and Zervantonakis, IK and Dueck, H (2023) Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation. In: Cell Systems, 14 (4). pp. 252-257.
Jolly, MK and Roy, S (2022) Editorial: Topical Collection on Emergent Dynamics of Biological Networks. In: Journal of Biosciences, 47 (4).
Capp, J-P and Jolly, MK and Sharma, A (2021) Editorial: Non-Genetic Heterogeneity in Development and Disease. In: Frontiers in Genetics, 12 .
Tripathi, SC and Jolly, MK and Mani, SA and Levine, H (2021) Editorial: Characterizing the Multi-Faceted Dynamics of Tumor Cell Plasticity. In: Frontiers in Molecular Biosciences, 7 .
Saxena, K and Subbalakshmi, AR and Jolly, MK (2019) Phenotypic heterogeneity in circulating tumor cells and its prognostic value in metastasis and overall survival. In: EBioMedicine, 46 . pp. 4-5.
