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Thankamony, AP and Ramkomuth, S and Ramesh, ST and Murali, R and Chakraborty, P and Karthikeyan, N and Varghese, BA and Jaikumar, VS and Jolly, MK and Swarbrick, A and Nair, R (2023) Phenotypic heterogeneity drives differential disease outcome in a mouse model of triple negative breast cancer. In: Frontiers in Oncology, 13 .
Aggarwal, V and Sahoo, S and Donnenberg, VS and Chakraborty, P and Jolly, MK and Sant, S (2022) P4HA2: A link between tumor-intrinsic hypoxia, partial EMT and collective migration. In: Advances in Cancer Biology - Metastasis, 5 .
Brown, MS and Abdollahi, B and Wilkins, OM and Lu, H and Chakraborty, P and Ognjenovic, NB and Muller, KE and Jolly, MK and Christensen, BC and Hassanpour, S and Pattabiraman, DR (2022) Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer. In: Science Advances, 8 (31).
Mandal, S and Tejaswi, T and Janivara, R and Srikrishnan, S and Thakur, P and Sahoo, S and Chakraborty, P and Sohal, SS and Levine, H and George, JT and Jolly, MK (2022) Transcriptomic-based quantification of the epithelial-hybrid-mesenchymal spectrum across biological contexts. In: Biomolecules, 12 (1).
Johnson, KS and Hussein, S and Chakraborty, P and Muruganantham, A and Mikhail, S and Gonzalez, G and Song, S and Jolly, MK and Toneff, MJ and Benton, ML and Lin, YC and Taube, JH (2022) CTCF expression and dynamic motif accessibility modulates epithelial�mesenchymal gene expression. In: Cancers, 14 (1).
More, MH and Varankar, SS and Naik, RR and Dhake, RD and Ray, P and Bankar, RM and Mali, AM and Subbalakshmi, AR and Chakraborty, P and Jolly, MK and Bapat, SA (2022) A Multistep Tumor Growth Model of High-Grade Serous Ovarian Carcinoma Identifies Hypoxia-Associated Signatures. In: Cells Tissues Organs, 213 (2). pp. 79-95.
Deshmukh, AP and Vasaikar, SV and Tomczak, K and Tripathi, S and Den Hollander, P and Arslan, E and Chakraborty, P and Soundararajan, R and Jolly, MK and Rai, K and Levine, H and Mani, SA (2021) Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencing. In: Proceedings of the National Academy of Sciences of the United States of America, 118 (19).
Deng, Y and Chakraborty, P and Jolly, MK and Levine, H (2021) A theoretical approach to coupling the epithelial-mesenchymal transition (Emt) to extracellular matrix (ecm) stiffness via loxl2. In: Cancers, 13 (7).
Chakraborty, P and George, JT and Woodward, WA and Levine, H and Jolly, MK (2021) Gene expression profiles of inflammatory breast cancer reveal high heterogeneity across the epithelial-hybrid-mesenchymal spectrum. In: Translational Oncology, 14 (4).
Chakraborty, P and George, JT and Tripathi, S and Levine, H and Jolly, MK (2020) Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum. In: Frontiers in Bioengineering and Biotechnology, 8 .
Sahoo, S and Singh, D and Chakraborty, P and Jolly, MK (2020) Emergent properties of the HNF4Α-pparγ network may drive consequent phenotypic plasticity in NAFLD. In: Journal of Clinical Medicine, 9 (3).
Tripathi, S and Chakraborty, P and Levine, H and Jolly, MK (2020) A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. In: PLoS Computational Biology, 16 (2).
