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Aravinda, Subrayashastry and Shamala, Narayanaswamy and Balaram, Padmanabhan (2014) INDUCTION OF FOLDED STRUCTURES IN DESIGNED PEPTIDES USING CONFORMATIONALLY CONSTRAINED RESIDUES. In: Conference on Biomolecular Forms and Functions - A Celebration of 50 Years of the Ramachandran Map, JAN, 2013, Indian Inst Sci, Bangalore, INDIA, pp. 264-281.
Basuroy, Krishnayan and Kantharaju, Kamanna and Aravinda, Subrayashastry and Shamala, Narayanaswamy and Balaram, Padmanabhan (2019) Pregabalin peptides: conformational comparison of gamma(3)- and gamma(4)-substituted gamma-amino acids in alpha gamma alpha alpha alpha pentapeptides. In: AMINO ACIDS, 51 (9). pp. 1297-1306.
Crisma, Marco and Formaggio, Fernando and Aleman, Carlos and Torras, Joan and Ramakrishnan, Chandrasekharan and Kalmankar, Neha and Balaram, Padmanabhan and Toniolo, Claudio (2018) The fully-extended conformation in peptides and proteins. In: PEPTIDE SCIENCE, 110 (5, SI).
Vijayasarathy, Marimuthu and Basheer, Soorej M and Balaram, Padmanabhan (2018) Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins. In: JOURNAL OF PROTEOME RESEARCH, 17 (8). pp. 2695-2703.
Toniolo, Claudio and Crisma, Marco and Formaggio, Fernando and Aleman, Carlos and Ramakrishnan, Chandrasekharan and Kalmankar, Neha and Balaram, Padmanabhan (2017) Intramolecular backbone center dot center dot center dot backbone hydrogen bonds in polypeptide conformations. The other way around: epsilon-turn. In: BIOPOLYMERS, 108 (1, SI).
Vasantha, Basavalingappa and Yamanappa, Hunashal and Raghothama, Srinivasarao and Balaram, Padmanabhan (2017) Conformational properties and aggregation of homo-oligomeric beta(3)(R)-valine peptides in organic solvents. In: BIOPOLYMERS, 108 (3).
Vijayasarathy, Marimuthu and Basheer, Soorej M and Franklin, Jayaseelan Benjamin and Balaram, Padmanabhan (2017) Contryphan Genes and Mature Peptides in the Venom of Nine Cone Snail Species by Transcriptomic and Mass Spectrometric Analysis. In: JOURNAL OF PROTEOME RESEARCH, 16 (2). pp. 763-772.
Vasantha, Basavalingappa and George, Gijo and Raghothama, Srinivasarao and Balaram, Padmanabhan (2017) Homooligomeric beta(3)(R)-valine peptides: transformation between C-14 and C-12 helical structures induced by a guest Aib residue. In: BIOPOLYMERS, 108 (1, SI).
Pareek, Vidhi and Samanta, Moumita and Joshi, Niranjan V and Balaram, Hemalatha and Murthy, Mathur RN and Balaram, Padmanabhan (2016) Connecting Active-Site Loop Conformations and Catalysis in Triosephosphate Isomerase: Insights from a Rare Variation at Residue96 in the Plasmodial Enzyme. In: CHEMBIOCHEM, 17 (7). pp. 620-629.
Reddy, Madhusudana MB and Basuroy, Krishnayan and Aravinda, Subrayashastry and Balaram, Padmanabhan (2016) Crystallographic characterization of the alpha,gamma C-12 helix in hybrid peptide sequences. In: JOURNAL OF PEPTIDE SCIENCE, 22 (8). pp. 504-510.
Bandyopadhyay, Debarati and Prakash, Sunita and Gupta, Kallol and Balaram, Padmanabhan (2016) Mass spectrometric analysis of dimer-disrupting mutations in Plasmodium triosephosphate isomerase. In: ANALYTICAL BIOCHEMISTRY, 500 . pp. 45-50.
Kumar, Sanjeev and Prakash, Sunita and Gupta, Kallol and Dongre, Aparna and Balaram, Padmanabhan and Balaram, Hemalatha (2016) Unexpected functional implication of a stable succinimide in the structural stability of Methanocaldococcus jannaschii glutaminase. In: NATURE COMMUNICATIONS, 7 .
Chandrappa, Siddappa and Reddy, MB Madhusudana and Sonti, Rajesh and Basuroy, Krishnayan and Raghothama, Srinivasarao and Balaram, Padmanabhan (2015) Directing peptide conformation with centrally positioned pre-organized dipeptide segments: studies of a 12-residue helix and beta-hairpin. In: AMINO ACIDS, 47 (2). pp. 291-301.
Toniolo, Claudio and Crisma, Marco and Moretto, Alessandro and Peggion, Cristina and Formaggio, Fernando and Aleman, Carlos and Cativiela, Carlos and Ramakrishnan, Chandrasekharan and Balaram, Padmanabhan (2015) Peptide delta-Turn: Literature Survey and Recent Progress. In: CHEMISTRY-A EUROPEAN JOURNAL, 21 (40). pp. 13866-13877.
Reddy, Muthukurpalya Bhojegowd Madhusudana and Basuroy, Krishnayan and Chandrappa, Siddappa and Dinesh, Bhimareddy and Basavalingappa, Vasantha and Venkatesha, Manjunath Achanna and Balaram, Padmanabhan (2015) Structural characterization of folded and extended conformations in peptides containing gamma amino acids with proteinogenic side chains: crystal structures of gamma(n), (alpha gamma)(n) and gamma gamma delta gamma sequences. In: NEW JOURNAL OF CHEMISTRY, 39 (5). pp. 3319-3326.
Basuroy, Krishnayan and Karuppiah, Vasantham and Balaram, Padmanabhan (2014) C-11/C-9 Helices in Crystals of alpha beta Hybrid Peptides and Switching Structures between Helix Types by Variation in the alpha-Residue. In: ORGANIC LETTERS, 16 (17). pp. 4614-4617.
Sonti, Rajesh and Dinesh, Bhimareddy and Basuroy, Krishnayan and Raghothama, Srinivasarao and Shamala, Narayanaswamy and Balaram, Padmanabhan (2014) C-12 Helices in Long Hybrid (alpha gamma)(n) Peptides Composed Entirely of Unconstrained Residues with Proteinogenic Side Chains. In: ORGANIC LETTERS, 16 (6). pp. 1656-1659.
Sonti, Rajesh and Rao, Shashanka K N and Chidanand, Sudarshan and Gowd, Konkallu Hanumae and Raghothama, Srinivasarao and Balaram, Padmanabhan (2014) Conformational Analysis of a 20-Membered Cyclic Peptide Disulfide from Conus virgo with a WPW Segment: Evidence for an Aromatic-Proline Sandwich. In: CHEMISTRY-A EUROPEAN JOURNAL, 20 (17). pp. 5075-5086.
Pal, Rumpa and Reddy, Madhusudana MB and Dinesh, Bhimareddy and Balaram, Padmanabhan and Row, Tayur Guru N (2014) Temperature-Induced Reversible First-Order Single Crystal to Single Crystal Phase Transition in Boc-gamma(4)(R)Val-Val-OH: Interplay of Enthalpy and Entropy. In: JOURNAL OF PHYSICAL CHEMISTRY A, 118 (40). pp. 9568-9574.
Dinesh, Bhimareddy and Vinaya, Vishwanathan and Raghothama, Srinivasarao and Balaram, Padmanabhan (2013) C12-Helix development in ()n sequences - spectroscopic characterization of Boc-Aib-4(R)Val]-OMe oligomers. In: European Journal of Organic Chemistry (17). pp. 3590-3596.
Sonti, Rajesh and Gopi, Hosahudya N and Muddegowda, Umashankara and Ragothama, Srinivasarao and Balaram, Padmanabhan (2013) Designed three-stranded beta-sheet in an alpha/beta hybrid peptide. In: Chemistry - A European Journal, 19 (19). pp. 5955-5965.
Aravinda, Subrayashastry and Raghavender, Upadhyayula S and Rai, Rajkishor and Harini, Veldore V and Shamala, Narayanaswamy and Balaram, Padmanabhan (2013) Analysis of designed beta-hairpin peptides: molecular conformation and packing in crystals. In: Organic & Biomolecular Chemistry, 11 (25). pp. 4220-4231.
Sonti, Rajesh and Gowd, Konkallu Hanumae and Rao, KN Shashanka and Ragothama, Srinivasarao and Rodriguez, Alex and Jesus Perez, Juan and Balaram, Padmanabhan (2013) Conformational Diversity in Contryphans from Conus Venom: cis-trans Isomerisation and Aromatic/Proline Interactions in the 23-Membered Ring of a 7-Residue Peptide Disulfide Loop. In: CHEMISTRY-A EUROPEAN JOURNAL, 19 (45). pp. 15175-15189.
Basuroy, Krishnayan and Dinesh, Bhimareddy and Shamala, Narayanaswamy and Balaram, Padmanabhan (2013) Promotion of Folding in Hybrid Peptides through Unconstrained gamma Residues: Structural Characterization of Helices in (alpha gamma gamma)(n) and (alpha gamma alpha)(n) Sequences. In: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 52 (11). pp. 3136-3139.
Bhattacharyya, Moitrayee and Gupta, Kallol and Gowd, Konkallu Hanumae and Balaram, Padmanabhan (2013) Rapid mass spectrometric determination of disulfide connectivity in peptides and proteins. In: Molecular BioSystems, 9 (6). pp. 1340-1350.
Basuroy, Krishnayan and Dinesh, Bhimareddy and Reddy, Madhusudana MB and Chandrappa, Siddapa and Raghothama, Srinivasarao and Shamala, Narayanaswamy and Balaram, Padmanabhan (2013) Unconstrained Homooligomeric gamma-Peptides Show High Propensity for C-14 Helix Formation. In: ORGANIC LETTERS, 15 (18). pp. 4866-4869.
Dinesh, Bhimareddy and Basuroy, Krishnayan and Shamala, Narayanaswamy and Balaram, Padmanabhan (2012) Structural characterization of folded pentapeptides containing centrally positioned beta(R)Val, gamma(R)Val and gamma(S)Val residues. In: TETRAHEDRON, 68 (23). pp. 4374-4380.
Khoo, Keith K and Gupta, Kallol and Green, Brad R and Zhang, Min-Mm and Watkins, Maren and Olivera, Baldomero M and Balaram, Padmanabhan and Yoshikami, Doju and Bulaj, Grzegorz and Norton, Raymond S (2012) Distinct Disulfide Isomers of mu-Conotoxins KIIIA and KIIIB Block Voltage-Gated Sodium Channels. In: BIOCHEMISTRY, 51 (49). pp. 9826-9835.
Pathak, Khyati V and Keharia, Haresh and Gupta, Kallol and Thakur, Suman S and Balaram, Padmanabhan (2012) Lipopeptides from the Banyan Endophyte, Bacillus subtilis K1: Mass Spectrometric Characterization of a Library of Fengycins. In: JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 23 (10). pp. 1716-1728.
Sonti, Rajesh and Rai, Rajkishor and Ragothama, Srinivasarao and Balaram, Padmanabhan (2012) NMR Analysis of Cross Strand Aromatic Interactions in an 8 Residue Hairpin and a 14 Residue Three Stranded beta-Sheet Peptide. In: JOURNAL OF PHYSICAL CHEMISTRY B, 116 (49). pp. 14207-14215.
Basuroy, Krishnayan and Dinesh, Bhimareddy and Shamala, Narayanaswamy and Balaram, Padmanabhan (2012) Structural Characterization of Backbone-Expanded Helices in Hybrid Peptides: (alpha gamma)(n) and (alpha beta)(n) Sequences with Unconstrained beta and gamma Homologues of L-Val. In: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 51 (35). pp. 8736-8739.
Basuroy, Krishnayan and Karuppiah, Vasantham and Shamala, Narayanaswamy and Balaram, Padmanabhan (2012) The Structural Characterization of Folded Peptides Containing the Conformationally Constrained beta-Amino Acid Residue beta(2,2)Ac(6)c. In: HELVETICA CHIMICA ACTA, 95 (12). pp. 2589-2603.
Basuroy, Krishnayan and Dinesh, Bhimareddy and Shamala, Narayanaswamy and Balaram, Padmanabhan (2012) Structural characterization of backbone-expanded helices in hybrid peptides: (αγ) n and (αβ) n sequences with unconstrained β and γ homologues of L-Val. In: Angewandte Chemie - International Edition, 51 (35). pp. 8736-8739.
Basuroy, Krishnayan and Rajagopal, Appavu and Raghothama, Srinivasarao and Shamala, Narayanaswamy and Balaram, Padmanabhan (2012) beta-Turn Analogues in Model a ss-Hybrid Peptides: Structural Characterization of Peptides Containing ss 2,2Ac6c and ss 3,3Ac6c Residues. In: CHEMISTRY-AN ASIAN JOURNAL, 7 (7). pp. 1671-1678.
Bandyopadhyay, Debarati and Murthy, Mathur R N and Balaram, Hemalatha and Balaram, Padmanabhan (2015) Probing the role of highly conserved residues in triosephosphate isomerase-analysis of site specific mutants at positions 64 and 75 in the Plasmodial enzyme. In: FEBS JOURNAL, 282 (20). pp. 3863-3882.
