|
 | Up a level |
Naveenkumar, Nagarajan and Sowdhamini, Ramanathan and Srinivasan, Narayanaswamy (2019) Specialized structural and functional roles of residues selectively conserved in subfamilies of the pleckstrin homology domain family. In: FEBS OPEN BIO, 9 (11). pp. 1848-1859.
Jayashree, Srinivasan and Murugavel, Pavalam and Sowdhamini, Ramanathan and Srinivasan, Narayanaswamy (2019) Interface residues of transient protein-protein complexes have extensive intra-protein interactions apart from inter-protein interactions. In: BIOLOGY DIRECT, 14 .
Vishwanath, Sneha and Sukhwal, Anshul and Sowdhamini, Ramanathan and Srinivasan, Narayanaswamy (2017) Specificity and stability of transient protein-protein interactions. In: CURRENT OPINION IN STRUCTURAL BIOLOGY, 44 . pp. 77-86.
Sandhya, Sankaran and Mudgal, Richa and Kumar, Gayatri and Sowdhamini, Ramanathan and Srinivasan, Narayanaswamy (2016) Protein sequence design and its applications. In: CURRENT OPINION IN STRUCTURAL BIOLOGY, 37 . pp. 71-80.
Babbitt, Patricia C and Bagos, Pantelis G and Bairoch, Amos and Bateman, Alex and Chatonnet, Arnaud and Chen, Mark Jinan and Craik, David J and Finn, Robert D and Gloriam, David and Haft, Daniel H and Henrissat, Bernard and Holliday, Gemma L and Isberg, Vignir and Kaas, Quentin and Landsman, David and Lenfant, Nicolas and Manning, Gerard and Nagano, Nozomi and Srinivasan, Narayanaswamy and O'Donovan, Claire and Pruitt, Kim D and Sowdhamini, Ramanathan and Rawlings, Neil D and Saier, Milton H and Sharman, Joanna L and Spedding, Michael and Tsirigos, Konstantinos D. and Vastermark, Ake and Vriend, Gerrit (2015) Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat. In: DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION .
Ramakrishnan, Gayatri and Ochoa-Montano, Bernardo and Raghavender, Upadhyayula S and Mudgal, Richa and Joshi, Adwait G and Chandra, Nagasuma R and Sowdhamini, Ramanathan and Blundell, Tom L and Srinivasan, Narayanaswamy (2015) Enriching the annotation of Mycobacterium tuberculosis H37Rv proteome using remote homology detection approaches: Insights into structure and function. In: TUBERCULOSIS, 95 (1). pp. 14-25.
Mudgal, Richa and Sandhya, Sankaran and Kumar, Gayatri and Sowdhamini, Ramanathan and Chandra, Nagasuma R and Srinivasan, Narayanaswamy (2015) NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection. In: NUCLEIC ACIDS RESEARCH, 43 (D1). D300-D305.
Metri, Rahul and Hariharaputran, Sridhar and Ramakrishnan, Gayatri and Anand, Praveen and Raghavender, Upadhyayula S and Ochoa-Montano, Bernardo and Higueruelo, Alicia P and Sowdhamini, Ramanathan and Chandra, Nagasuma R and Blundell, Tom L and Srinivasan, Narayanaswamy (2015) SInCRe-structural interactome computational resource for Mycobacterium tuberculosis. In: DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION .
Mudgal, Richa and Sowdhamini, Ramanathan and Chandra, Nagasuma and Srinivasan, Narayanaswamy and Sandhya, Sankaran (2014) Filling-in Void and Sparse Regions in Protein Sequence Space by Protein-Like Artificial Sequences Enables Remarkable Enhancement in Remote Homology Detection Capability. In: JOURNAL OF MOLECULAR BIOLOGY, 426 (4). pp. 962-979.
Kaushik, Swati and Mutt, Eshita and Chellappan, Ajithavalli and Sankaran, Sandhya and Srinivasan, Narayanaswamy and Sowdhamini, Ramanathan (2013) Improved Detection of Remote Homologues Using Cascade PSI-BLAST: Influence of Neighbouring Protein Families on Sequence Coverage. In: PLOS ONE, 8 (2).
Shameer, Khader and Madan, Lalima L and Veeranna, Shivamurthy and Gopal, Balasubramanian and Sowdhamini, Ramanathan (2010) PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactomes. In: BMC Bioinformatics, 11 .
Sandhya, Sankaran and Pankaj, Barah and Govind, Madabosse Kande and Offmann, Bernard and Srinivasan, Narayanaswamy and Sowdhamini, Ramanathan (2008) CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations. In: BMC Structural Biology, 8 (28).
Srinivasan, N and Sowdhamini, Ramanathan and Ramakrishnan, Chandrashekharan and Balaram, Padmanabhan (1991) Analysis of short loops connecting secondary structural elements in proteins. In: Molecular Conformation and Biological Interactions . pp. 59-73.
Ramakrishnan, Chandrashekharan and Sowdhamini, Ramanathan and Balaram, Padmanabhan (1988) Analysis of short interproton distances in proline peptides as a guide in the interpretation of nuclear overhauser effects. In: Collection of Czechoslovak Chemical Communications, 53 (11b). pp. 2801-2809.
Gromiha, M Michael and Orengo, Christine A and Sowdhamini, Ramanathan and Thornton, and Janet M and Valencia, Alfonso (2022) Srinivasan (1962–2021) in Bioinformatics and beyond. In: Bioinformatics, 38 (8). pp. 2377-2379. ISSN 1367-4803
Holliday, Gemma L and Bairoch, Amos and Bagos, Pantelis G and Chatonnet, Arnaud and Craik, David J and Finn, Robert D and Henrissat, Bernard and Landsman, David and Manning, Gerard and Nagano, Nozomi and O'Donovan, Claire and Pruitt, Kim D and Rawlings, Neil D and Saier, Milton and Sowdhamini, Ramanathan and Spedding, Michael and Srinivasan, Narayanaswamy and Vriend, Gert and Babbitt, Patricia C and Bateman, Alex (2015) Key challenges for the creation and maintenance of specialist protein resources. In: PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 83 (6). pp. 1005-1013.
