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Dhar, Neha and Mohan, Abhilash and Thakur, Chandrani and Chandra, Nagasuma R and Dighe, Rajan R (2016) Dissecting the structural and functional features of the Luteinizing hormone receptor using receptor specific single chain fragment variables. In: MOLECULAR AND CELLULAR ENDOCRINOLOGY, 427 (C). pp. 1-12.
Ramakrishnan, Gayatri and Ochoa-Montano, Bernardo and Raghavender, Upadhyayula S and Mudgal, Richa and Joshi, Adwait G and Chandra, Nagasuma R and Sowdhamini, Ramanathan and Blundell, Tom L and Srinivasan, Narayanaswamy (2015) Enriching the annotation of Mycobacterium tuberculosis H37Rv proteome using remote homology detection approaches: Insights into structure and function. In: TUBERCULOSIS, 95 (1). pp. 14-25.
Mudgal, Richa and Sandhya, Sankaran and Kumar, Gayatri and Sowdhamini, Ramanathan and Chandra, Nagasuma R and Srinivasan, Narayanaswamy (2015) NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection. In: NUCLEIC ACIDS RESEARCH, 43 (D1). D300-D305.
Ramakrishnan, Gayatri and Chandra, Nagasuma R and Srinivasan, Narayanaswamy (2015) Recognizing drug targets using evolutionary information: implications for repurposing FDA-approved drugs against Mycobacterium tuberculosis H37Rv. In: MOLECULAR BIOSYSTEMS, 11 (12). pp. 3316-3331.
Metri, Rahul and Hariharaputran, Sridhar and Ramakrishnan, Gayatri and Anand, Praveen and Raghavender, Upadhyayula S and Ochoa-Montano, Bernardo and Higueruelo, Alicia P and Sowdhamini, Ramanathan and Chandra, Nagasuma R and Blundell, Tom L and Srinivasan, Narayanaswamy (2015) SInCRe-structural interactome computational resource for Mycobacterium tuberculosis. In: DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION .
Ramakrishnan, Gayatri and Chandra, Nagasuma R and Srinivasan, Narayanaswamy (2014) From Workstations to Workbenches: Towards Predicting Physicochemically Viable Protein-Protein Interactions Across a Host and a Pathogen. In: IUBMB LIFE, 66 (11). pp. 759-774.
Arora, Ashish and Chandra, Nagasuma R and Das, Amit and Gopal, Balasubramanian and Mande, Shekhar C and Prakash, Balaji and Ramachandran, Ravishankar and Sankaranarayanan, Rajan and Sekar, K and Suguna, Kaza and Tyagi, Anil K and Vijayan, Mamannamana (2011) Structural biology of Mycobacterium tuberculosis proteins: The Indian efforts. In: Tuberculosis, 91 (5, SI). pp. 456-468.
Chaturvedi, Rashmi and Bansal, Kushagra and Narayana, Yeddula and Kapoor, Nisha and Sukumar, Namineni and Togarsimalemath, Shambhuprasad Kotresh and Chandra, Nagasuma R and Mishra, Saurabh and Ajitkumar, Parthasarathi and Joshi, Beenu and Katoch, Vishwa Mohan and Patil, Shripad A and Balaji, Kithiganahalli N (2010) The Multifunctional PE_PGRS11 Protein from Mycobacterium tuberculosis Plays a Role in Regulating Resistance to Oxidative Stress. In: Journal of Biological Chemistry, 285 (40). pp. 30389-30403.
Gupta, Prabuddha and Rajeswari, Haryadi and Arumugam, Muthu and Mishra, Saurabh and Bhagavat, Raghu and Anand, Praveen and Chandra, Nagasuma R and Srinivasan, Ramanujam and Indi, Shantinath and Ajitkumar, Parthasarathi (2010) Mycobacterium tuberculosis FtsZ requires at least one arginine residue at the C-terminal end for polymerization in vitro. In: Acta Biochimica et Biophysica Sinica, 42 (1). pp. 58-69.
Prabu, J Rajan and Thamotharan, S and Khanduja, Jasbeer Singh and Chandra, Nagasuma R and Muniyappa, K and Vijayan, M (2009) Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA: Additional role of RuvB-binding domain and inter species variability. In: Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, 1794 (7). pp. 1001-1009.
Nagaraja, Viswanathan Arun and Arumugam, Rajavel and Chandra, Nagasuma R and Prasad, Dasari and Rangarajan, Pundi N and Padmanaban, Govindarajan (2009) Localisation of Plasmodium falciparum uroporphyrinogen III decarboxylase of the heme-biosynthetic pathway in the apicoplast and characterisation of its catalytic properties. In: International Journal for Parasitology, 39 (5). pp. 559-568.
Vani, J and Chatterjee, Jhinuk and Shaila, MS and Nayak, R and Chandra, Nagasuma R (2009) Structural basis for the function of anti-idiotypic antibody in immune memory. In: Molecular Immunology, 46 (6). pp. 1250-1255.
Bhadra, Sahely and Bhattacharyya, Chiranjib and Chandra, Nagasuma R and Mian, I Saira (2009) A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data. In: Algorithms for Molecular Biology, 4 (5). pp. 1-15.
Raman, Karthik and Yeturu, Kalidas and Chandra, Nagasuma R (2008) targetTB: A target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis. In: BMC Systems Biology, 2 (109).
Prabu, Rajan J and Manjunath, GP and Chandra, Nagasuma R and Muniyappa, K and Vijayan, M (2008) Functionally important movements in RecA molecules and filaments: studies involving mutation and environmental changes. In: Acta Crystallographica Section D - Biological Crystallography, 64 (Part 1). pp. 1146-1157.
Damodaran, Deepa and Jeyakani, Justin and Chauhan, Alok and Kumar, Nirmal and Chandra, Nagasuma R and Surolia, Avadhesha (2008) CancerLectinDB: a database of lectins relevant to cancer. In: Glycoconjugate Journal, 25 (3). pp. 191-198.
Verkhedkar, K and Raman, K and Chandra, Nagasuma R and Vishveshwara, Saraswathi (2007) Metabolome based reaction graphs of M.tuberculosis and M.leprae: A comparative network analysis. In: PLOS ONE, 2 (9).
Konkimalla, Badireenath V and Laxminarayana Suhas, Venkatramana and Chandra, Nagasuma R and Gebhart, Erich and Efferth, Thomas (2007) Diagnosis and therapy of oral squamous cell carcinoma. In: Expert Review of Anticancer Therapy, 7 (3). pp. 317-329.
Bhattacharya, Sourangshu and Bhattacharyya, Chiranjib and Chandra, Nagasuma R (2007) Comparison of protein structures by growing neighborhood alignments. In: BMC Bioinformatics, 8 (77).
Ramesh, Sneha and Bharath, Srinivas MM and Chandra, Nagasuma R and Rao, Manchanahalli Satyanarayana R (2006) A K52Q substitution in the globular domain of histone H1t modulates its nucleosome binding properties. In: FEBS Letters, 580 (25). pp. 5999-6006.
Chandra, Nagasuma R and Kumar, Nirmal and Justin, Jeyakani and Singh, Desh Deepak and Gowda, Sharan B and Prathima, MN (2006) Lectindb: a plant lectin database. In: Glycobiology, 16 (10). pp. 938-946.
Prabu, J Rajan and Thamotharan, S and Khanduja, Jasbeer Singh and Alipio, Emily Zabala and Kim, Chang-Yub and Waldo, Geoffrey S and Terwilliger, Thomas C and Segelke, Brent and Lekin, Tim and Toppani, Dominique and Hung, Li-Wei and Yu, Minmin and Bursey, Evan Bursey and Muniyappa, K and Chandra, Nagasuma R and Vijayan, M (2006) Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination. In: Acta Crystallogr Sect F Struct Biol Cryst Commun, 62 (8). 731 -734.
Bhattacharya, Sourangshu and Bhattacharyya, Chiranjib and Chandra, Nagasuma R (2006) Projections for fast protein structure retrieval. In: BMC Bioinformatics, 7 . S5.
Chaitra, GM and Hariharaputran, Sridhar and Chandra, Nagasuma R and Shaila, MS and Nayak, R (2005) Defining putative T cell epitopes from PE and PPE families of proteins of Mycobacterium tuberculosis with vaccine potential. In: Vaccine, 23 (10). pp. 1265-1272.
Raval, Sujana and Gowda, Sharan B and Singh, Desh D and Chandra, Nagasuma R (2004) A database analysis of jacalin-like lectins: Sequence-structure-function relationships. In: Glycobiology, 14 (12). pp. 1247-1263.
Dhanasekaran, Shanmugham and Chandra, Nagasuma R and Sagar, Chandrasekhar BK and Rangarajan, Pundi N and Padmanaban, Govindarajan (2004) $\delta$-Aminolevulinic Acid Dehydratase from Plasmodium falciparum. In: Journal of Biological Chemistry, 279 (8). pp. 6934-6942.
Muniyappa, K and Ganesh, N and Guhan, N and Singh, Pawan and Manjunath, GP and Datta, S and Chandra, Nagasuma R and Vijayan, M (2004) Homologous recombination in mycobacteria. In: Current Science, 86 (1). pp. 141-148.
Datta, S and Krishna, R and Ganesh, N and Chandra, Nagasuma R and Muniyappa, K and Vijayan, M (2003) Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes. In: Journal of Bacteriology, 185 . pp. 4280-4284.
Ramachandraiah, Gosu and Chandra, Nagasuma R and Surolia, A and Vijayan, M (2003) Computational analysis of multivalency in lectins: structures of garlic lectin± oligosaccharide complexes and their aggregates. In: Glycobiology, 13 (11). pp. 765-775.
Bharath, Srinivas MM and Chandra, Nagasuma R and Rao, MRS (2003) Molecular modeling of the chromatosome particle. In: Nucleic-Acids-Research, 31 (14). pp. 4264-4274.
Datta, S and Ganesh, N and Chandra, Nagasuma R and Muniyappa, K and Vijayan, M (2003) Structural studies on MtRecA-nucleotide complexes: Insights into DNA and nucleotide binding and the structural signature of NTP recognition. In: Proteins: Structure, Function, and Genetics, 50 . pp. 474-485.
Bharath, Srinivas MM and Ramesh, Sneha and Chandra, Nagasuma R and Rao, MRS (2002) Identification of a 34 Amino Acid Stretch within the C-Terminus of Histone H1 As the DNA-Condensing Domain by Site-Directed Mutagenesis. In: Biochemistry, 41 (24). 7617 -7627.
Bharath, Srinivas MM and Chandra, Nagasuma R and Rao, MRS (2002) Prediction of an HMG-box fold in the C-terminal domain of histone H1: Insights into its role in DNA condensation. In: Proteins: Structure, Function, and Genetics, 49 (1). pp. 71-81.
Ramachandraiah, Gosu and Chandra, Nagasuma R and Surolia, A and Vijayan, M (2002) Re-refinement using reprocessed data to improve the quality of the structure: a case study involving garlic lectin. In: Acta Crystallographica Section D, 58 . pp. 414-420.
Chandra, Nagasuma R and Prabu, MM and Suguna, K and Vijayan, M (2001) Structural Similarity and Functional Diversity in Proteins containing the Legume Lectin Fold. In: Protien Engineering, 14 (11). pp. 857-866.
Datta, S and Prabu, MM and Vaze, MB and Ganesh, N and Chandra, Nagasuma R and Muniyappa, K and Vijayan, M (2000) Crystal Structures of Mycobacterium tuberculosis RecA and its complex ADP-AIF-4: implications for decreased ATPase activity and molecular aggregation. In: Nucleic Acids Research, 28 (24). pp. 4964-4973.
Ramachandraiah, Gosu and Chandra, Nagasuma R (2000) Sequence and Structural Determinants of Mannose Recognition. In: Proteins: Structure, Function, and Genetics, 39 (4). pp. 358-364.
Chandra, Nagasuma R and Ramachandraiah, Gosu and Bachhawat, Kiran and Dam, Tarun K and Surolia, A and Vijayan, M (1999) Crystal Structure of a Dimeric Mannose-specific Agglutinin from Garlic: Quaternary Association and Carbohydrate Specificity. In: Journal of Molecular Biology, 285 . pp. 1157-1168.
Chandra, Nagasuma R and Prabu, Moses M and Venkatraman, Janani and Suresh, Stephen and Vijayan, M (1998) X-ray studies on crystalline complexes involving amino acids and peptides. XXXIII. Crystal structures of L- and DL-arginine complexed with oxalic acid and a comparative study of amino acid oxalic acid complexes. In: Acta Crystallographica Section B Acta Crystallogr B, 54 (03). pp. 257-263.
Ravishankar, R and Chandra, Nagasuma R and Vijayan, M (1998) X-Ray studies on Crystalline Complexes Involving Amino Acids and Peptides. XXXIV. Novel Mode of Aggregation, Interaction Patterns, and Chiral Effects on Maleic Acid Complexes of DL- and L-Arginine. In: Journal of Biomolecular Structure and Dynamics, 15 (6). pp. 1093-1100.
Chandra, Nagasuma R and Dam, Tarun K and Surolia, A and Vijayan, M (1997) Crystallization and preliminary crystallographic studies on the mannose-specific lectin from garlic. In: Acta Crystallographica Section D, 53 . pp. 787-788.
Kishan, Radha KV and Chandra, Nagasuma R and Sudarsanakumar, C and Suguna, K and Vijayan, M (1995) Water-Dependent Domain Motion and Flexibility in Ribonuclease A and the Invariant Features in its Hydration Shell. An X-ray Study of Two Low-Humidity Crystal Forms of the Enzyme. In: Acta Crystallographica Section D, 51 . pp. 703-710.
