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Journal Article

Bhattacharya, Sohini and Jhunjhunwala, Ayush and Halder, Antarip and Bhattacharyya, Dhananjay and Mitra, Abhijit (2019) Going beyond base-pairs: topology-based characterization of base-multiplets in RNA. In: RNA, 25 (5). pp. 573-589.

Haider, Antarip and Data, Dhruv and Seelam, Preethi P and Bhattacharyya, Dhananjay and Mitra, Abhijit (2019) Estimating Strengths of Individual Hydrogen Bonds in RNA Base Pairs: Toward a Consensus between Different Computational Approaches. In: ACS OMEGA, 4 (4). pp. 7354-7368.

Halder, Antarip and Vemuri, Saurabh and Roy, Rohit and Katuri, Jayanth and Bhattacharyya, Dhananjay and Mitra, Abhijit (2019) Evidence for Hidden Involvement of N3-Protonated Guanine in RNA Structure and Function. In: ACS OMEGA, 4 (1). pp. 699-709.

Bhattacharyya, Dhananjay and Halder, Sukanya and Basu, Sankar and Mukherjee, Debasish and Kumar, Prasun and Bansal, Manju (2017) RNAHelix: computational modeling of nucleic acid structures with Watson-Crick and non-canonical base pairs. In: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 31 (2). pp. 219-235.

Mukherjee, Sanchita and Kailasam, Senthilkumar and Bansal, Manju and Bhattacharyya, Dhananjay (2015) Stacking Interactions in RNA and DNA: Roll-Slide Energy Hyperspace for Ten Unique Dinucleotide Steps. In: BIOPOLYMERS, 103 (3). pp. 134-147.

Mukherjee, Sanchita and Kailasam, Senthilkumar and Bansal, Manju and Bhattacharyya, Dhananjay (2014) Energy Hyperspace for Stacking Interaction in AU/AU Dinucleotide Step: Dispersion-Corrected Density Functional Theory Study. In: BIOPOLYMERS, 101 (1). pp. 107-120.

Mogurampelly, Santosh and Panigrahi, Swati and Bhattacharyya, Dhananjay and Sood, AK and Maiti, Prabal K (2012) Unraveling siRNA unzipping kinetics with graphene. In: Journal of Chemical Physics, 137 (5). 054903-1.

Santosh, Mogurampelly and Panigrahi, Swati and Bhattacharyya, Dhananjay and Sood, AK and Maiti, Prabal K (2012) Unzipping and binding of small interfering RNA with single walled carbon nanotube: A platform for small interfering RNA delivery. In: Journal of Chemical Physics, The, 136 (6).

Mukherjee, Shayantani and Bansal, Manju and Bhattacharyya, Dhananjay (2006) Conformational specificity of non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis. In: Journal of Computer-Aided Molecular Design, 20 (10-11). pp. 629-645.

Bhattacharyya, Dhananjay and Bansal, Manju (1992) Groove width and depth of B-DNA structures depend on local variation in slide. In: Journal of Biomolecular Structure & Dynamics, 10 (1). pp. 213-226.

Bhattacharyya, Dhananjay and Bansal, Manju (1988) Why do DNA helical models exhibit wedge rolls? A mathematical rationale. In: Current Science, 57 (21). pp. 1159-1162.