MD DaVis: Interactive data visualization of protein molecular dynamics

Maity, D and Pal, D (2022) MD DaVis: Interactive data visualization of protein molecular dynamics. In: Bioinformatics, 38 (12). pp. 3299-3301.

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Abstract

Summary: Molecular dynamics (MD) simulations have become an integral part of biomolecular study. Most MD software suites do not include analysis tools and those which do create very basic visualizations. Molecular Dynamics Data Visualizer (MD DaVis) is a python package developed to facilitate quick comparative analysis of MD trajectories of similar proteins or the same protein under different conditions. MD DaVis can quickly generate interactive visualization from molecular dynamics trajectories with a few simple steps. Interactive plots eliminate the need to make multiple plots for comparison, improving productivity and saving time.

Item Type:	Journal Article
Publication:	Bioinformatics
Publisher:	Oxford University Press
Additional Information:	The copyright for this article belongs to the Oxford University Press.
Keywords:	article; data visualization; molecular dynamics; productivity; software
Department/Centre:	Division of Interdisciplinary Sciences > Computational and Data Sciences Division of Physical & Mathematical Sciences > Mathematics
Date Deposited:	20 Jul 2022 12:12
Last Modified:	20 Jul 2022 12:12
URI:	https://eprints.iisc.ac.in/id/eprint/74946

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