CAP: conformation angles package—displaying the conformation angles of side chains in proteins

Sheik, SS and Sundararajan, P and Shanthi, V and Sekar, K (2003) CAP: conformation angles package—displaying the conformation angles of side chains in proteins. In: Bioinformatics, 19 (8). pp. 1043-1044.

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Abstract

A graphics package has been developed to display all side chain conformation angles of the user selected residue in a given protein structure. The proposed package is incorporated with all the protein structures (solved using X-ray diffraction and NMR spectroscopy) available in the Protein Data Bank. The package displays the multiple conformations adopted by a single amino acid residue whose structure is solved and refined at very high resolution. In addition, it shows the percentage distribution of the side chain conformation angles in different rotameric states.

Item Type:	Journal Article
Publication:	Bioinformatics
Publisher:	Oxford University Press
Additional Information:	Copyright of this article belongs to Oxford University Press
Department/Centre:	Division of Interdisciplinary Sciences > Supercomputer Education & Research Centre Division of Information Sciences (Doesn't exist now) > BioInformatics Centre
Date Deposited:	12 Dec 2008 05:19
Last Modified:	19 Sep 2010 04:53
URI:	http://eprints.iisc.ac.in/id/eprint/16647

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