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Items where Subject is "Centre for Biosystems Science and Engineering"

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Book Chapter

Basu, B and Kalin, M and Manoj Kumar, BV (2020) Friction and Wear of Ceramics: Principles and Case Studies. [Book Chapter]

Datey, A and Gopalan, J and Chakravortty, D (2021) Needleless or noninvasive delivery technology. [Book Chapter]

Gogoi, M and Karmakar, K and Chandra, K and Chakravortty, D (2017) Methylglyoxal and other AGEs: Good and bad dual role in the body. [Book Chapter]

Hajra, D and Datey, A and Chakravortty, D (2020) Attenuation methods for live vaccines. [Book Chapter]

Jia, D and Jolly, MK and Levine, H and Onuchic, JN (2020) Epithelial-mesenchymal transition in cancer. [Book Chapter]

Kavya Satheesh, K S and Rani, Harsha and Jolly, Mohit Kumar and Mahadevan, Vijayalakshmi (2021) Epigenetics of epithelial to mesenchymal transition (EMT) in cancer. [Book Chapter]

Kulkarni, P and Nathan, A and Salgia, R and Rangarajan, G and Jolly, MK (2020) Phenotypic switching and prostate diseases: a model proposing a causal link between benign prostatic hyperplasia and prostate cancer. [Book Chapter]

Levine, H and Jolly, MK and Kulkarni, P and Nanjundiah, V (2020) Phenotypic Switching: Implications in Biology and Medicine. [Book Chapter]

Padmanabhan, P and Raja, R and Dixit, NM (2020) Bistability in virus-host interaction networks underlies the success of hepatitis C treatments. [Book Chapter]

Pramanik, D and Kanchi, S and Ayappa, KG and Maiti, PK (2021) Dendrimers: A novel nanomaterial. [Book Chapter]

Roy, U and Collins, T and Jolly, MK and Katira, P (2012) Biophysical and Biochemical Mechanisms Underlying Collective Cell Migration in Cancer Metastasis. [Book Chapter]

Sahoo, S and Subbalakshmi, AR and Jolly, MK (2020) The fundamentals of phenotypic plasticity. [Book Chapter]

Singha, MK and Dwivedi, P and Sankhe, G and Patra, A and Rojwal, V (2021) Role of Sensors, Devices and Technology for Detection of COVID-19 Virus. [Book Chapter]

Somarelli, JA and Armstrong, AJ and Sheth, MU and Ware, KE and Jolly, MK (2020) Phenotypic plasticity and lineage switching in prostate cancer. [Book Chapter]

Tripathi, S and Levine, H and Jolly, MK (2020) The Physics of Cellular Decision Making during Epithelial-Mesenchymal Transition. [Book Chapter]

Tripathi, S and Xing, J and Levine, H and Jolly, MK (2020) Mathematical modeling of plasticity and heterogeneity in EMT. [Book Chapter]

Yang, Y and Jolly, MK and Levine, H (2019) Computational Modeling of Collective Cell Migration: Mechanical and Biochemical Aspects. [Book Chapter]

Conference Proceedings

Kaushalram, Archana and Hegde, Gopalkrishna and Talabattula, Srinivas (2019) Comparative analysis of ultra-compact few-mode photonic wires on LNOI and SOI platforms. In: Conference on Integrated Optics - Devices, Materials, and Technologies XXIII, FEB 04-07, 2019, San Francisco, CA.

Conference Paper

Achuth Rao, MV and Yadav, S and Ghosh, PK (2017) A dual source-filter model of snore audio for snorer group classification. In: 18th Annual Conference of the International Speech Communication Association, INTERSPEECH 2017, 20 - 24 August 2017, Stockholm, pp. 3502-3506.

Adiga, V and Adiga, B and Adiga, PC and Roy Mahapatra, D and Hegde, G (2021) Hermetic Sealed Perovskite Solar Cells: Water Stable Encapsulation. In: 48th IEEE Photovoltaic Specialists Conference, PVSC 2021, 20-25 Jun 2021, Bengaluru; India, pp. 904-907.

Ananthanarayanan, V and Mylavarapu, SVS (2020) Meeting report - the Microtubules, Motors, Transport and Trafficking (M2T2) 2019 meeting. In: The Molecular Motors, Transport and Trafficking (M2T2) meeting, 18-20 October, 2019, National Brain Research Centre (NBRC), Manesar, India.

Balaji, VR and Dhanabalan, SS and Sridarshini, T and Robinson, S and Murugan, M and Hegde, G (2023) Photonic Crystal Drop Filter for DWDM Systems. In: Virtual International Conference on Futuristic Communication and Network Technologies, VICFCNT 2021, 10 - 11 December 2021, pp. 483-493.

Chandru, Vijay and Dasgupta, Sudeshna (2005) Minimal unsatisfiable sets: Classification and bounds. In: 9th Asian Computing Science Conference, DEC 08-10, 2004, Chiang Mai, THAILAND.

Goswami, S and Ramachandran, RV and Bhat, R and Dasgupta, D and Barman, A and Saini, DK and Ghosh, A (2022) Evidence for the Successful Manipulation of a Magnetic Nanorobot Inside the Hard Tumor of a Live Animal. In: 2022 IEEE International Conference on Emerging Electronics, 11- 14 Dec 2022, Bangalore.

Jagdish, AK and Kumar, MP and Sandeep, BS and Ramamurthy, PC and Mahapatra, DR and Hegde, G (2018) Hierarchical structures and multiscale optical coupling for improved photodetectors. In: 4th IEEE International Conference on Emerging Electronics, ICEE 2018, 17-19 December 2018, Bengaluru.

Joshi, RK and Manu, KS and Hari, RS and Jayachandra, M and Pandya, HJ (2022) Design, Development and Validation of a Portable Visual P300 Event-Related Potential Extraction System. In: 2022 IEEE Biomedical Circuits and Systems Conference, BioCAS 2022, 13 - 15 October 2022, Taipei, pp. 409-413.

Joshi, RK and Manu, KS and Hari, RS and Jayachandra, M and Pandya, HJ (2022) Design, Development and Validation of a Portable Visual P300 Event-Related Potential Extraction System. In: 2022 IEEE Biomedical Circuits and Systems Conference, BioCAS 2022, 13 - 15 October 2022, Taipei, pp. 409-413.

Kumar, D (2022) Search for Dark Matter with mono-X Signatures in CMS. In: 41st International Conference on High Energy Physics, ICHEP 2022, 6- 13 July 2022, Bologna.

Nath, B and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2021) Effect of top electrode using Silver Nano powder on the performance of Perovskite Solar cells. In: 48th IEEE Photovoltaic Specialists Conference, 20-25 Jun 2021, Bengaluru, pp. 326-329.

Nath, B and Ramamurthy, PC and Roy Mahapatra, D and Hegde, G (2021) Effect of top electrode using Silver Nano powder on the performance of Perovskite Solar cells. In: 48th IEEE Photovoltaic Specialists Conference, PVSC 2021, 20-25 jun 2021, Fort Lauderdale, pp. 326-329.

Patil, G and Ramachandran, RV and Ghosh, A (2022) Optimisation of techniques for fabrication of nanopatterned substrates. In: 2022 IEEE International Conference on Emerging Electronics, 11- 14 Dec 2022, Bangalore.

Vishnu, AGK and De, T and Ariun, BS and Rangarajan, A and Pandya, HJ (2021) Towards the development of a table-top system for tumour delineation using electro-thermal characterization. In: 7th IEEE International Conference on Electronics, Computing and Communication Technologies, 9-11 Jul 2021, Bangalore.

Yadav, S and Gope, D and Krishnaswamy, UM and Ghosh, PK (2021) Convolutional Dense Neural Network Based Spirometry Variable FVC Prediction Using Sustained Phonations. In: 31st IEEE International Workshop on Machine Learning for Signal Processing, 25-28 Oct 2021, Gold Coast.

Yadav, S and Keerthana, M and Gope, D and Uma Maheswari, K and Kumar Ghosh, P (2020) Analysis of Acoustic Features for Speech Sound Based Classification of Asthmatic and Healthy Subjects. In: 2020 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2020, 4-8, May 2020, Barcelona, Spain, pp. 6789-6793.

Yadav, S and Nk, K and Gope, D and Krishnaswamy, UM and Ghosh, PK (2018) Comparison of Cough, Wheeze and Sustained Phonations for Automatic Classification between Healthy Subjects and Asthmatic Patients. In: 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018, 18 - 21 July 2018, Honolulu, pp. 1400-1403.

Journal Article

Agarwal, P and Toley, BJ (2022) Unreacted Labeled PCR Primers Inhibit the Signal in a Nucleic Acid Lateral Flow Assay as Elucidated by a Transport Reaction Model. In: ACS Measurement Science Au, 2 (4). pp. 317-324.

Agarwal, Rachit and Johnson, Christopher T and Imhoff, Barry R and Donlan, Rodney M and McCarty, Nael A and Garcia, Andres J (2018) Inhaled bacteriophage-loaded polymeric microparticles ameliorate acute lung infections. In: NATURE BIOMEDICAL ENGINEERING, 2 (11). pp. 841-849.

Aggarwal, A and Naskar, S and Maroli, N and Gorai, B and Dixit, NM and Maiti, PK (2021) Mechanistic insights into the effects of key mutations on SARS-CoV-2 RBD-ACE2 binding. In: Physical Chemistry Chemical Physics, 23 (46). pp. 26451-26458.

Aggarwal, V and Sahoo, S and Donnenberg, VS and Chakraborty, P and Jolly, MK and Sant, S (2022) P4HA2: A link between tumor-intrinsic hypoxia, partial EMT and collective migration. In: Advances in Cancer Biology - Metastasis, 5 .

Agrawal, A and Hari, KVS and Arun, SP (2020) A compositional neural code in high-level visual cortex can explain jumbled word reading. In: eLife, 9 .

Agrawal, A and Nag, S and Hari, KVS and Arun, SP (2022) Letter Processing in Upright Bigrams Predicts Reading Fluency Variations in Children. In: Journal of Experimental Psychology: General .

Agrawal, Ayush and Apoorva, K and Ayappa, KG (2017) Transmembrane oligomeric intermediates of pore forming toxin Cytolysin A determine leakage kinetics. In: RSC ADVANCES, 7 (82). pp. 51750-51762.

Agrawal, P and Katragadda, S and Hariharan, AK and Raghavendrachar, VG and Agarwal, A and Dayalu, R and Awasthy, D and Sharma, SC and Sivasamy, YK and Lakshmana, P and Shanmugam, A and Veeramachaneni, V and Gupta, V and Vani, BP and Subaiya, L and Syamala, TS and Hariharan, R and Chandru, V and Bloom, DE (2021) Validation of whole genome sequencing from dried blood spots. In: BMC Medical Genomics, 14 (1).

Agrawal, Ruchi and Kumar, Prem and Ramanan, Harini and Saini, Deepak Kumar (2016) FRET reveals multiple interaction states between two component signalling system proteins of M. tuberculosis. In: BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1860 (7). pp. 1498-1507.

Agrawal, Ruchi and Sahoo, Bikash Kumar and Saini, Deepak Kumar (2016) Cross-talk and specificity in two-component signal transduction pathways. In: FUTURE MICROBIOLOGY, 11 (5). pp. 685-697.

Aiyar, Y and Chandru, V and Chatterjee, M and Desai, S and Fernandez, A and Gupta, A and Kang, G and Khanna, T and Mazumdar-Shaw, K and Mor, N and Mukherji, A and Muttreja, P and Narayan, T and Patwardhan, B and Rao, KS and Sharma, S and Shetty, D and Subramanian, SV and Varkey, LEC and Venkateswaran, S and Patel, V (2021) India's resurgence of COVID-19: urgent actions needed. In: The Lancet, 397 (10291). pp. 2232-2234.

Alagarasan, D and Varadharajaperumal, S and Arun Kumar, KD and Naik, R and Arunkumar, A and Ganesan, R and Hegde, G and El Sayed Massoud, E (2021) Optimization of different temperature annealed nanostructured CdSe thin film for photodetector applications. In: Optical Materials, 122 .

Alakesh, A and Jothiprakasam, T and Raghavan, JV and Jhunjhunwala, S (2022) Sterile inflammation alters neutrophil kinetics in mice. In: Journal of Leukocyte Biology .

Ananthanarayanan, Vaishnavi (2019) Cell scientist to watch - Vaishnavi Ananthanarayanan. In: JOURNAL OF CELL SCIENCE, 132 (11).

Ansari, AF and Reddy, YBS and Raut, J and Dixit, NM (2021) An efficient and scalable top-down method for predicting structures of microbial communities. In: Nature Computational Science, 1 (9). pp. 619-628.

Antony, A and P, P and Jedryka, J and Ozga, K and Hegde, G and Kulkarni, SD and Chandra Petwal, V and Verma, VP and Dwivedi, J (2021) Enhancement of defects induced optical nonlinearity in Al: ZnO thin films by electron beam. In: Materials Science in Semiconductor Processing, 128 .

Ashwini, R and Mohanta, Z and Kumar, MKP and Santosh, MS and Srivastava, C (2021) Enhanced heterogeneous electron transfer kinetics in Graphene Oxide produced from mechanically milled Graphite. In: Carbon Trends, 5 .

Badal, D and Jayarani, AV and Kollaran, MA and Kumar, A and Singh, V (2020) Pseudomonas aeruginosa bioflm formation on endotracheal tubes requires multiple two-component systems. In: Journal of Medical Microbiology, 69 (6). pp. 906-919.

Badal, D and Jayarani, AV and Kollaran, MA and Prakash, D and Monisha, P and Singh, V (2021) Foraging Signals Promote Swarming in Starving Pseudomonas aeruginosa. In: mBio, 12 (5).

Bagheri, Meisam and Nair, Raji R and Singh, Krishna Kumar and Saini, Deepak Kumar (2017) ATM-ROS-iNOS axis regulates nitric oxide mediated cellular senescence. In: BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 1864 (1). pp. 177-190.

Balachander, GM and Kotcherlakota, R and Nayak, B and Kedaria, D and Rangarajan, A and Chatterjee, K (2021) 3D Tumor Models for Breast Cancer: Whither We Are and What We Need. In: ACS Biomaterials Science and Engineering .

Balachander, Gowri Manohari and Balaji, Sai A and Rangarajan, Annapoorni and Chatterjee, Kaushik (2015) Enhanced Metastatic Potential in a 3D Tissue Scaffold toward a Comprehensive in Vitro Model for Breast Cancer Metastasis. In: ACS APPLIED MATERIALS & INTERFACES, 7 (50). pp. 27810-27822.

Balachander, Gowri Manohari and Talukdar, Pinku Mani and Debnath, Monojit and Rangarajan, Annapoorni and Chatterjee, Kaushik (2018) Inflammatory Role of Cancer-Associated Fibroblasts in Invasive Breast Tumors Revealed Using a Fibrous Polymer Scaffold. In: ACS APPLIED MATERIALS & INTERFACES, 10 (40). pp. 33814-33826.

Balakrishnan, Arjun and Das Sarma, Priya and Bhattacharjee, Oindrilla and Kim, Jong Myoung and Das Sarma, Shiladitya and Chakravortty, Dipshikha (2016) Halobacterial nano vesicles displaying murine bactericidal permeability-increasing protein rescue mice from lethal endotoxic shock. In: SCIENTIFIC REPORTS, 6 .

Balakrishnan, Arjun and Schnare, Markus and Chakravortty, Dipshikha (2016) Of Men not Mice: Bactericidal/Permeability-increasing Protein expressed in human Macrophages acts as a Phagocytic receptor and Modulates entry and replication of gram-negative Bacteria. In: FRONTIERS IN IMMUNOLOGY, 7 .

Balakrishnan, S and Mathad, SS and Sharma, G and Raju, SR and Reddy, UB and Das, S and Ananthasuresh, GK (2019) A Nondimensional Model Reveals Alterations in Nuclear Mechanics upon Hepatitis C Virus Replication. In: Biophysical Journal, 116 (7). pp. 1328-1339.

Banerjee, Sunaina and Maurya, Satyaghosh and Roy, Rahul (2018) Single-molecule fluorescence imaging: Generating insights into molecular interactions in virology. In: JOURNAL OF BIOSCIENCES, 43 (3). pp. 519-540.

Banerjee, U and Baloni, P and Singh, A and Chandra, N (2021) Immune Subtyping in Latent Tuberculosis. In: Frontiers in Immunology, 12 .

Banerjee, U and Chunchanur, S and R, A and Balaji, KN and Singh, A and Chakravortty, D and Chandra, N (2023) Systems-level profiling of early peripheral host-response landscape variations across COVID-19 severity states in an Indian cohort. In: Genes and Immunity .

Banerjee, U and Sankar, S and Singh, A and Chandra, N (2020) A Multi-Pronged Computational Pipeline for Prioritizing Drug Target Strategies for Latent Tuberculosis. In: Frontiers in Chemistry, 8 .

Baral, S and Raja, R and Sen, P and Dixit, NM (2019) Towards multiscale modeling of the CD8 + T cell response to viral infections. In: Wiley Interdisciplinary Reviews: Systems Biology and Medicine .

Baral, Subhasish and Antia, Rustom and Dixit, Narendra M (2019) A dynamical motif comprising the interactions between antigens and CD8 T cells may underlie the outcomes of viral infections. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116 (35). pp. 17393-17398.

Baral, Subhasish and Raja, Rubesh and Sen, Pramita and Dixit, Narendra M (2019) Towards multiscale modeling of the CD8(+) T cell response to viral infections. In: WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE, 11 (4).

Baral, Subhasish and Roy, Rahul and Dixit, Narendra M (2018) Modeling how reversal of immune exhaustion elicits cure of chronic hepatitis C after the end of treatment with direct-acting antiviral agents. In: IMMUNOLOGY AND CELL BIOLOGY, 96 (9). pp. 969-980.

Barnabas, V and Kashyap, A and Raja, R and Newar, K and Rai, D and Dixit, NM and Mehra, S (2022) The Extent of Antimicrobial Resistance Due to Efflux Pump Regulation. In: ACS Infectious Diseases .

Barui, S and Chowdhury, S and Samajdar, R and Chakraborty, S and Gavade, M and Basu, B (2020) Impact of �core-shell� mode of printing on properties of 3D binderjet printed zirconia-alumina based bioceramics. In: Open Ceramics, 3 .

Barui, S and Hadagalli, K and Mukherjee, S and Roy, S and Bhattacharjee, D and Basu, B (2022) Pilot-scale manufacturing of phase-pure and highly crystalline hydroxyapatite: Lessons learned and process protocols. In: International Journal of Applied Ceramic Technology, 19 (2). pp. 762-772.

Barui, S and Mishra, D and Gowtham, NH and Basu, B (2022) No more ‘core-shell’ in binderjetting of bioceramics: Novel solution and experimental validation in microstructure and mechanical properties. In: Journal of the European Ceramic Society, 43 (3). 1178 -1188.

Barui, Srimanta and Mandal, Sourav and Basu, Bikramjit (2017) Thermal inkjet 3D powder printing of metals and alloys: Current status and challenges. In: Current Opinion in Biomedical Engineering, 2 . pp. 116-123. ISSN 24684511

Barui, Srimanta and Panda, Asish K and Naskar, S and Kuppuraj, R and Basu, Saptarshi and Basu, Bikramjit (2019) 3D inkjet printing of biomaterials with strength reliability and cytocompatibility: Quantitative process strategy for Ti-6Al-4V. In: BIOMATERIALS, 213 .

Basu, B and Bhaskar, N and Barui, S and Sharma, V and Das, S and Govindarajan, N and Hegde, P and Perikal, PJ and Antharasanahalli Shivakumar, M and Khanapure, K and Tekkatte Jagannatha, A (2021) Evaluation of implant properties, safety profile and clinical efficacy of patient-specific acrylic prosthesis in cranioplasty using 3D binderjet printed cranium model: A pilot study. In: Journal of Clinical Neuroscience, 85 . pp. 132-142.

Basu, S and Basu, B and Maiti, PK (2022) A computational study on strontium ion modified hydroxyapatite-fibronectin interactions. In: Physical Chemistry Chemical Physics, 24 (45). pp. 27989-28002.

Basu, S and Gorai, B and Basu, B and Maiti, PK (2021) Electric Field-Mediated Fibronectin-Hydroxyapatite Interaction: A Molecular Insight. In: Journal of Physical Chemistry B, 125 (1). pp. 3-16. (In Press)

Basu, S and Nag, S and Kottan, NB and Basu, B (2022) In silico study on probing atomistic insights into structural stability and tensile properties of Fe-doped hydroxyapatite single crystals. In: Scientific Reports, 12 (1).

Basu, Subhadip and Basu, Bikramjit (2019) Doped biphasic calcium phosphate: synthesis and structure. In: JOURNAL OF ASIAN CERAMIC SOCIETIES, 7 (3). pp. 265-283.

Behera, Bhagaban and Vishnu, Anil G K and Chatterjee, Suman and Sitaramgupta, V S N V and Sreekumar, Niranjana and Nagabhushan, Apoorva and Rajendran, Nirmala and Prathik, B H and Pandya, Hardik J (2019) Emerging technologies for antibiotic susceptibility testing. In: BIOSENSORS & BIOELECTRONICS, 142 .

Bhaskar, N and Kachappilly, MC and Bhushan, V and Pandya, HJ and Basu, B (2022) Electrical field stimulated modulation of cell fate of pre-osteoblasts on PVDF/BT/MWCNT based electroactive biomaterials. In: Journal of Biomedical Materials Research - Part A .

Bhaskar, Nitu and Padmavathy, Nagarajan and Jain, Shubham and Bose, Suryasarathi and Basu, Bikramjit (2016) Modulated in Vitro Biocompatibility of a Unique Cross-Linked Salicylic Acid-Poly(epsilon-caprolactone)-Based Biodegradable Polymer. In: ACS APPLIED MATERIALS & INTERFACES, 8 (43). pp. 29721-29733.

Bhaskar, Nitu and Sarkar, Debasish and Basu, Bikramjit (2018) Probing Cytocompatibility, Hemocompatibility, and Quantitative Inflammatory Response in Mus musculus toward Oxide Bioceramic Wear Particulates and a Comparison with CoCr. In: ACS BIOMATERIALS SCIENCE & ENGINEERING, 4 (9). pp. 3194-3210.

Bhat, Imtiyaz Ahmad and Jain, Ruchi and Siddiqui, Mujahuddin M and Saini, Deepak K and Mukherjee, Partha Sarathi (2017) Water-Soluble Pd8L4 Self-assembled Molecular Barrel as an Aqueous Carrier for Hydrophobic Curcumin. In: INORGANIC CHEMISTRY, 56 (9). pp. 5352-5360.

Bhavya, MB and Prabhu B, R and Shenoy, BM and Bhol, P and Swain, S and Saxena, M and John, NS and Hegde, G and Samal, AK (2020) Femtomolar detection of thiram: via SERS using silver nanocubes as an efficient substrate. In: Environmental Science: Nano, 7 (12). pp. 3999-4009.

Bhosle, A and Datey, A and Chandrasekharan, G and Singh, D and Chakravortty, D and Chandra, N (2020) A Strategic Target Rescues Trimethoprim Sensitivity in Escherichia coli. In: iScience, 23 (4).

Bhusari, Shardul Atul and Sharma, Vidushi and Bose, Suryasarathi and Basu, Bikramjit (2019) HDPE/UHMWPE hybrid nanocomposites with surface functionalized graphene oxide towards improved strength and cytocompatibility. In: JOURNAL OF THE ROYAL SOCIETY INTERFACE, 16 (150).

Biswas, K and Jolly, MK and Ghosh, A (2021) First passage time properties of miRNA-mediated protein translation. In: Journal of Theoretical Biology, 529 .

Biswas, K and Jolly, MK and Ghosh, A (2022) Mean residence times of TF-TF and TF-miRNA toggle switches. In: Journal of Biosciences, 47 (2).

Biswas, K and Jolly, MK and Ghosh, A (2019) Stability and mean residence times for hybrid epithelial/mesenchymal phenotype. In: Physical Biology, 16 (2).

Bocci, F and Onuchic, JN and Jolly, MK (2020) Understanding the Principles of Pattern Formation Driven by Notch Signaling by Integrating Experiments and Theoretical Models. In: Frontiers in Physiology, 11 .

Bocci, Federico and Gearhart-Serna, Larisa and Boareto, Marcelo and Ribeiro, Mariana and Ben-Jacob, Eshel and Devi, Gayathri R and Levine, Herbert and Onuchic, Jose Nelson and Jolly, Mohit Kumar (2019) Toward understanding cancer stem cell heterogeneity in the tumor microenvironment. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116 (1). pp. 148-157.

Bocci, Federico and Jolly, Mohit Kumar and Onuchic, Jose Nelson (2019) A Biophysical Model Uncovers the Size Distribution of Migrating Cell Clusters across Cancer Types. In: CANCER RESEARCH, 79 (21). pp. 5527-5535.

Bocci, Federico and Tripathi, Satyendra C and Mercedes, Samuel A Vilchez and George, Jason T and Casabar, Julian P and Wong, Pak Kin and Hanash, Samir M and Levine, Herbert and Onuchic, Jose N and Jolly, Mohit Kumar (2019) NRF2 activates a partial epithelial-mesenchymal transition and is maximally present in a hybrid epithelial/mesenchymal phenotype. In: INTEGRATIVE BIOLOGY, 11 (6). pp. 251-263.

Boda, Sunil Kumar and Pandit, Subhendu and Garai, Aditya and Pal, Debnath and Basu, Bikramjit (2016) Bacterial siderophore mimicking iron complexes as DNA targeting antimicrobials. In: RSC ADVANCES, 6 (45). pp. 39245-39260.

Boda, Sunil Kumar and Ravikumar, K and Saini, Deepak K and Basu, Bikramjit (2015) Differential viability response of prokaryotes and eukaryotes to high strength pulsed magnetic stimuli. In: BIOELECTROCHEMISTRY, 106 (B). pp. 276-289.

Boda, Sunil Kumar and Thrivikraman, Greeshma and Panigrahy, Bharati and Sarma, D D and Basu, Bikramjit (2017) Competing Roles of Substrate Composition, Microstructure, and Sustained Strontium Release in Directing Osteogenic Differentiation of hMSCs. In: ACS APPLIED MATERIALS & INTERFACES, 9 (23). pp. 19389-19408.

Boruah, B and Samantaray, PK and Madras, G and Modak, J M and Bose, S (2020) Sustainable photocatalytic water remediation via dual active strongly coupled AgBiO3 on PVDF/PBSA membranes. In: Chemical Engineering Journal, 394 .

Bose, S and Volpatti, LR and Thiono, D and Yesilyurt, V and McGladrigan, C and Tang, Y and Facklam, A and Wang, AR and Jhunjhunwala, S and Veiseh, O and Hollister-Lock, J and Bhattacharya, C and Weir, GC and Greiner, DL and Langer, R and Anderson, DG (2020) A retrievable implant for the long-term encapsulation and survival of therapeutic xenogeneic cells. In: Nature Biomedical Engineering, 4 (8). pp. 814-826.

Brown, MS and Abdollahi, B and Wilkins, OM and Lu, H and Chakraborty, P and Ognjenovic, NB and Muller, KE and Jolly, MK and Christensen, BC and Hassanpour, S and Pattabiraman, DR (2022) Phenotypic heterogeneity driven by plasticity of the intermediate EMT state governs disease progression and metastasis in breast cancer. In: Science Advances, 8 (31).

Bs, A and Gk, AV and Rao, S and Beniwal, M and Pandya, HJ (2022) Electrical Phenotyping of Human Brain Tissues: An Automated System for Tumor Delineation. In: IEEE Access, 10 . pp. 17908-17919.

Chacko, Leeba Ann and Mehta, Kritika and Ananthanarayanan, Vaishnavi (2019) Cortical tethering of mitochondria by the anchor protein Mcp5 enables uniparental inheritance. In: JOURNAL OF CELL BIOLOGY, 218 (11). pp. 3560-3571.

Chakrabortty, Tuhin and Suman, Akash and Gupta, Anjali and Singh, Varsha and Varma, Manoj (2019) Null model exhibiting synchronized dynamics in uncoupled oscillators. In: PHYSICAL REVIEW E, 99 (5).

Chakraborty, A and Chandru, V (2020) A Robust and Non-parametric Model for Prediction of Dengue Incidence. In: Journal of the Indian Institute of Science, 100 (4). pp. 893-899.

Chakraborty, P and George, JT and Tripathi, S and Levine, H and Jolly, MK (2020) Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum. In: Frontiers in Bioengineering and Biotechnology, 8 .

Chakraborty, P and George, JT and Woodward, WA and Levine, H and Jolly, MK (2021) Gene expression profiles of inflammatory breast cancer reveal high heterogeneity across the epithelial-hybrid-mesenchymal spectrum. In: Translational Oncology, 14 (4).

Chandorkar, Yashoda and Ravikumar, K and Basu, Bikramjit (2019) The Foreign Body Response Demystified. In: ACS BIOMATERIALS SCIENCE & ENGINEERING, 5 (1, SI). pp. 19-44.

Chandra, K and Chowdhury, AR and Chatterjee, R and Chakravortty, D (2022) GH18 family glycoside hydrolase Chitinase A of Salmonella enhances virulence by facilitating invasion and modulating host immune responses. In: PLoS Pathogens, 18 (4).

Chandra, Kasturi and Garai, Preeti and Chakravortty, Jayanta and Chakravortty, Dipshikha (2017) Peptide transporter YjiY influences the expression of the virulence gene mgtC to regulate biofilm formation in Salmonella. In: FEMS Microbiology Letters, 364 (24). ISSN 1574-6968

Chandru, V (2020) Exponential Technologies and the Perfect Storm for Digital Health. In: Journal of the Indian Institute of Science, 100 (4). pp. 593-595.

Chandru, V (2020) From digital technology to living machines. In: Current Science, 119 (12). pp. 1879-1880.

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and Henkel, V and Herb, M and Hergovich, A and Herman-Antosiewicz, A and Hernández, A and Hernandez, C and Hernandez-Diaz, S and Hernandez-Gea, V and Herpin, A and Herreros, J and Hervás, JH and Hesselson, D and Hetz, C and Heussler, VT and Higuchi, Y and Hilfiker, S and Hill, JA and Hlavacek, WS and Ho, EA and Ho, IHT and Ho, PW-L and Ho, S-L and Ho, WY and Hobbs, GA and Hochstrasser, M and Hoet, PHM and Hofius, D and Hofman, P and Höhn, A and Holmberg, CI and Hombrebueno, JR and Yi-Ren Hong, C-WH and Hooper, LV and Hoppe, T and Horos, R and Hoshida, Y and Hsin, I-L and Hsu, H-Y and Hu, B and Hu, D and Hu, L-F and Hu, MC and Hu, R and Hu, W and Hu, Y-C and Hu, Z-W and Hua, F and Hua, J and Hua, Y and Huan, C and Huang, C and Huang, C and Huang, C and Huang, C and Huang, H and Huang, K and Huang, MLH and Huang, R and Huang, S and Huang, T and Huang, X and Huang, YJ and Huber, TB and Hubert, V and Hubner, CA and Hughes, SM and Hughes, WE and Humbert, M and Hummer, G and Hurley, JH and Hussain, S and Hussain, S and Hussey, PJ and Hutabarat, M and Hwang, H-Y and Hwang, S and Ieni, A and Ikeda, F and Imagawa, Y and Imai, Y and Imbriano, C and Imoto, M and Inman, DM and Inoki, K and Iovanna, J and Iozzo, RV and Ippolito, G and Irazoqui, JE and Iribarren, P and Ishaq, M and Ishikawa, M and Ishimwe, N and Isidoro, C and Ismail, N and Issazadeh-Navikas, S and Itakura, E and Ito, D and Ivankovic, D and Ivanova, S and Iyer, AKV and Izquierdo, JM and Izumi, M and Jäättelä, M and Jabir, MS and Jackson, WT and Jacobo-Herrera, N and Jacomin, A-C and Jacquin, E and Jadiya, P and Jaeschke, H and Jagannath, C and Jakobi, AJ and Jakobsson, J and Janji, B and Jansen-Dürr, P and Jansson, PJ and Jantsch, J and Januszewski, S and Jassey, A and Jean, S and Jeltsch-David, H and Jendelova, P and Jenny, A and Jensen, TE and Jessen, N and Jewell, JL and Ji, J and Jia, L and Jia, R and Jiang, L and Jiang, Q and Jiang, R and Jiang, T and Jiang, X and Jiang, Y and Jimenez-Sanchez, M and Jin, E-J and Jin, F and Jin, H and Jin, L and Jin, L and Jin, M and Jin, S and Jo, E-K and Joffre, C and Johansen, T and Johnson, GVW and Johnston, SA and Jokitalo, E and Jolly, MK and Joosten, LAB and Jordan, J and Joseph, B and Ju, D and Ju, J-S and Ju, J and Juárez, E and Judith, D and Juhász, G and Jun, Y and Jung, CH and Jung, S-C and Jung, YK and Jungbluth, H and Jungverdorben, J and Just, S and Kaarniranta, K and Kaasik, A and Kabuta, T and Kaganovich, D and Kahana, A and Kain, R and Kajimura, S and Kalamvoki, M and Kalia, M and Kalinowski, DS and Kaludercic, N and Kalvari, I and Kaminska, J and Kaminskyy, VO and Kanamori, H and Kanasaki, K and Kang, C and Kang, R and Kang, SS and Kaniyappan, S and Kanki, T and Kanneganti, T-D and Kanthasamy, AG and Kanthasamy, A and Kantorow, M and Kapuy, O and Karamouzis, MV and Karim, MR and Karmakar, P and Katare, RG and Kato, M and Kaufmann, SHE and Kauppinen, A and Kaushal, GP and Kaushik, S and Kawasaki, K and Kazan, K and Ke, P-Y and Keating, DJ and Keber, U and Kehrl, JH and Keller, KE and Keller, CW and Kemper, JK and Kenific, CM and Kepp, O and Kermorgant, S and Kern, A and Ketteler, R and Keulers, TG and Khalfin, B and Khalil, H and Khambu, B and Khan, SY and Khandelwal, VKM and Khandia, R and Kho, W and Khobrekar, NV and Khuansuwan, S and Khundadze, M and Killackey, SA and Kim, D and Kim, DR and Kim, D-H and Kim, D-E and Kim, EY and Kim, E-K and Kim, H-R and Kim, H-S and Kim, Hyung-Ryong and Kim, JH and Kim, JK and Kim, J-H and Kim, J and Kim, JH and Kim, KI and Kim, PK and Kim, S-J and Kimball, SR and Kimchi, A and Kimmelman, AC and Kimura, T and King, MA and Kinghorn, KJ and Kinsey, CG and Kirkin, V and Kirshenbaum, LA and Kiselev, SL and Kishi, S and Kitamoto, K and Kitaoka, Y and Kitazato, K and Kitsis, RN and Kittler, JT and Kjaerulff, O and Klein, PS and Klopstock, T and Klucken, J and Knævelsrud, H and Knorr, RL and Ko, BCB and Ko, F and Ko, J-L and Kobayashi, H and Kobayashi, S and Koch, I and Koch, JC and Koenig, U and Kögel, D and Koh, YH and Koike, M and Kohlwein, SD and Kocaturk, NM and Komatsu, M and König, J and Kono, T and Kopp, BT and Korcsmaros, T and Korkmaz, G and Korolchuk, VI and Korsnes, MS and Koskela, A and Kota, J and Kotake, Y and Kotler, ML and Kou, Y and Koukourakis, MI and Koustas, E and Kovacs, AL and Kovács, T and Koya, D and Kozako, T and Kraft, C and Krainc, D and Krämer, H and Krasnodembskaya, AD and Kretz-Remy, C and Kroemer, G and Ktistakis, NT and Kuchitsu, K and Kuenen, S and Kuerschner, L and Kukar, T and Kumar, A and Kumar, A and Kumar, D and Kumar, D and Kumar, S and Kume, S and Kumsta, C and Kundu, CN and Kundu, M and Kunnumakkara, AB and Kurgan, L and Kutateladze, TG and Kutlu, O and Kwak, S and Kwon, HJ and Kwon, TK and Kwon, YT and Kyrmizi, I and La Spada, A and Labonté, P and Ladoire, S and Laface, I and Lafont, F and Lagace, DC and Lahiri, V and Lai, Z and Laird, AS and Lakkaraju, A and Lamark, T and Lan, S-H and Landajuela, A and Lane, DJR and Lane, JD and Lang, CH and Lange, C and Langel, Ã� and Langer, R and Lapaquette, P and Laporte, J and LaRusso, NF and Lastres-Becker, I and Lau, WCY and Laurie, GW and Lavandero, S and Law, BYK and Law, HK-W and Layfield, R and Le, W and Le Stunff, H and Leary, AY and Lebrun, J-J and Leck, LYW and Leduc-Gaudet, J-P and Lee, C and Lee, C-P and Lee, D-H and Lee, EB and Lee, EF and Lee, GM and Lee, H-J and Lee, HK and Lee, JM and Lee, JS and Lee, J-A and Lee, J-Y and Lee, JH and Lee, M and Lee, MG and Lee, MJ and Lee, M-S and Lee, SY and Lee, S-J and Lee, SY and Lee, SB and Lee, WH and Lee, Y-R and Lee, Y-H and Lee, Y and Lefebvre, C and Legouis, R and Lei, YL and Lei, Y and Leikin, S and Leitinger, G and Lemus, L and Leng, S and Lenoir, O and Lenz, G and Lenz, HJ and Lenzi, P and León, Y and Leopoldino, AM and Leschczyk, C and Leskelä, S and Letellier, E and Leung, C-T and Leung, PS and Leventhal, JS and Levine, B and Lewis, PA and Ley, K and Li, B and Li, D-Q and Li, J and Li, J and Li, J and Li, K and Li, L and Li, M and Li, M and Li, M and Li, M and Li, M and Li, P-L and Li, M-Q and Li, Q and Li, S and Li, T and Li, W and Li, W and Li, X and Li, Y-P and Li, Y and Li, Z and Li, Z and Li, Z and Lian, J and Liang, C and Liang, Q and Liang, W and Liang, Y and Liang, Y and Liao, G and Liao, L and Liao, M and Liao, Y-F and Librizzi, M and Lie, PPY and Lilly, MA and Lim, HJ and Lima, TRR and Limana, F and Lin, C and Lin, C-W and Lin, D-S and Lin, F-C and Lin, JD and Lin, KM and Lin, K-H and Lin, L-T and Lin, P-H and Lin, Q and Lin, S and Lin, S-J and Lin, W and Lin, X and Lin, Y-X and Lin, Y-S and Linden, R and Lindner, P and Ling, S-C and Lingor, P and Linnemann, AK and Liou, Y-C and Lipinski, MM and LipovÅ¡ek, S and Lira, VA and Lisiak, N and Liton, PB and Liu, C and Liu, C-H and Liu, C-F and Liu, CH and Liu, F and Liu, H and Liu, H-S and Liu, H-F and Liu, H and Liu, J and Liu, J and Liu, J and Liu, L and Liu, L and Liu, M and Liu, Q and Liu, W and Liu, W and Liu, X-H 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and Martin-Burriel, I and Martin-Rincon, M and Martin-Sanz, P and Martina, JA and Martinet, W and Martinez, A and Martinez, A and Martinez, J and Martinez Velazquez, M and Martinez-Lopez, N and Martinez-Vicente, M and Martins, DO and Martins, JO and Martins, WK and Martins-Marques, T and Marzetti, E and Masaldan, S and Masclaux-Daubresse, C and Mashek, DG and Massa, V and Massieu, L and Masson, GR and Masuelli, L and Masyuk, AI and Masyuk, TV and Matarrese, P and Matheu, A and Matoba, S and Matsuzaki, S and Mattar, P and Matte, A and Mattoscio, D and Mauriz, JL and Mauthe, M and Mauvezin, C and Maverakis, E and Maycotte, P and Mayer, J and Mazzoccoli, G and Mazzoni, C and Mazzulli, JR and McCarty, N and McDonald, C and McGill, MR and McKenna, SL and McLaughlin, B and McLoughlin, F and McNiven, MA and McWilliams, TG and Mechta-Grigoriou, F and Medeiros, TC and Medina, DL and Megeney, LA and Megyeri, K and Mehrpour, M and Mehta, JL and Meijer, AJ and Meijer, AH and Mejlvang, J and 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Nandi, SS and Nanjundan, M and Nanni, M and Napolitano, G and Nardacci, R and Narita, M and Nassif, M and Nathan, I and Natsumeda, M and Naude, RJ and Naumann, C and Naveiras, O and Navid, F and Nawrocki, ST and Nazarko, TY and Nazio, F and Negoita, F and Neill, T and Neisch, AL and Neri, LM and Netea, MG and Neubert, P and Neufeld, TP and Neumann, D and Neutzner, A and Newton, PT and Ney, PA and Nezis, IP and Ng, CCW and Ng, TB and Nguyen, HTT and Nguyen, LT and Ni, H-M and Ní Cheallaigh, C and Ni, Z and Nicolao, MC and Nicoli, F and Nieto-Diaz, M and Nilsson, P and Ning, S and Niranjan, R and Nishimune, H and Niso-Santano, M and Nixon, RA and Nobili, A and Nobrega, C and Noda, T and Nogueira-Recalde, U and Nolan, TM and Nombela, I and Novak, I and Novoa, B and Nozawa, T and Nukina, N and Nussbaum-Krammer, C and Nylandsted, J and Oâ��Donovan, TR and Oâ��Leary, SM and Oâ��Rourke, EJ and Oâ��Sullivan, MP and Oâ��Sullivan, TE and Oddo, S and Oehme, I and Ogawa, M and Ogier-Denis, E and Ogmundsdottir, MH and Ogretmen, B and Oh, GT and Oh, S-H and Oh, YJ and Ohama, T and Ohashi, Y and Ohmuraya, M and Oikonomou, V and Ojha, R and Okamoto, K and Okazawa, H and Oku, M and Oliván, S and Oliveira, JMA and Ollmann, M and Olzmann, JA and Omari, S and Omary, MB and Ã�nal, G and Ondrej, M and Ong, S-B and Ong, S-G and Onnis, A and Orellana, JA and Orellana-Muñoz, S and Ortega-Villaizan, MDM and Ortiz-Gonzalez, XR and Ortona, E and Osiewacz, HD and Osman, A-HK and Osta, R and Otegui, MS and Otsu, K and Ott, C and Ottobrini, L and Ou, J-HJ and Outeiro, TF and Oynebraten, I and Ozturk, M and Pagès, G and Pahari, S and Pajares, M and Pajvani, UB and Pal, R and Paladino, S and Pallet, N and Palmieri, M and Palmisano, G and Palumbo, C and Pampaloni, F and Pan, L and Pan, Q and Pan, W and Pan, X and Panasyuk, G and Pandey, R and Pandey, UB and Pandya, V and Paneni, F and Pang, SY and Panzarini, E and Papademetrio, DL and Papaleo, E and Papinski, D and Papp, D and Park, EC and Park, HT and Park, J-M and Park, J-I and Park, JT and Park, J and Park, SC and Park, S-Y and Parola, AH and Parys, JB and Pasquier, A and Pasquier, B and Passos, JF and Pastore, N and Patel, HH and Patschan, D and Pattingre, S and Pedraza-Alva, G and Pedraza-Chaverri, J and Pedrozo, Z and Pei, G and Pei, J and Peled-Zehavi, H and Pellegrini, JM and Pelletier, J and Peñalva, MA and Peng, D and Peng, Y and Penna, F and Pennuto, M and Pentimalli, F and Pereira, CMF and Pereira, GJS and Pereira, LC and Pereira de Almeida, L and Perera, ND and Pérez-Lara, Ã� and Perez-Oliva, AB and Pérez-Pérez, ME and Periyasamy, P and Perl, A and Perrotta, C and Perrotta, I and Pestell, RG and Petersen, M and Petrache, I and Petrovski, G and Pfirrmann, T and Pfister, AS and Philips, JA and Pi, H and Picca, A and Pickrell, AM and Picot, S and Pierantoni, GM and Pierdominici, M and Pierre, P and Pierrefite-Carle, V and Pierzynowska, K and Pietrocola, F and Pietruczuk, M and Pignata, C and Pimentel-Muiños, FX and 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Shah, M and Chacko, LA and Joseph, JP and Ananthanarayanan, V (2021) Mitochondrial dynamics, positioning and function mediated by cytoskeletal interactions. In: Cellular and Molecular Life Sciences .

Sharma, P and Alakesh, A and Jhunjhunwala, S (2022) The consequences of particle uptake on immune cells. In: Trends in Pharmacological Sciences .

Sharma, P and Desikan, R and Ayappa, KG (2021) Evaluating Coarse-Grained MARTINI Force-Fields for Capturing the Ripple Phase of Lipid Membranes. In: Journal of Physical Chemistry B, 124 (24). pp. 6587-6599.

Sharma, P and Parthasarathi, S and Patil, N and Waskar, M and Raut, JS and Puranik, M and Ayappa, KG and Basu, JK (2020) Assessing Barriers for Antimicrobial Penetration in Complex Asymmetric Bacterial Membranes: A Case Study with Thymol. In: Langmuir, 36 (30). pp. 8800-8814.

Sharma, P and Sen, D and Neelakantan, V and Shankar, V and Jhunjhunwala, S (2019) Disparate effects of PEG or albumin based surface modification on the uptake of nano- and micro-particles. In: Biomaterials Science, 7 (4). pp. 1411-1421.

Sharma, P and Vijaykumar, A and Raghavan, JV and Rananaware, SR and Alakesh, A and Bodele, J and Rehman, JU and Shukla, S and Wagde, V and Nadig, S and Chakrabarti, S and Visweswariah, SS and Nandi, D and Gopal, B and Jhunjhunwala, S (2022) Particle uptake driven phagocytosis in macrophages and neutrophils enhances bacterial clearance. In: Journal of Controlled Release, 343 . pp. 131-141.

Sharma, PR and Dravid, AA and Kalapala, YC and Gupta, VK and Jeyasankar, S and Goswami, A and Agarwal, R (2021) Cationic inhalable particles for enhanced drug delivery to M. tuberculosis infected macrophages. In: Materials Science and Engineering C .

Sharma, S and Basu, B (2022) Biomaterials assisted reconstructive urology: The pursuit of an implantable bioengineered neo-urinary bladder. In: Biomaterials, 281 .

Sharma, S and Basu, B (2022) Insights into in Situ Compatibilization of Polydimethylsiloxane-Modified Thermoplastic Polyurethanes by Dynamic Crosslinking: Relating Experiments to Predictive Models. In: ACS Applied Polymer Materials, 4 (5). pp. 3752-3769.

Sharma, S and Bhaskar, N and Bose, S and Basu, B (2018) Biomimetic porous high-density polyethylene/polyethylene-grafted-maleic anhydride scaffold with improved in vitro cytocompatibility. In: Journal of Biomaterials Applications, 32 (10). pp. 1450-1463.

Sharma, S and Mandhani, A and Basu, B (2022) Contact-Active Layer-by-Layer Grafted TPU/PDMS Blends as an Antiencrustation and Antibacterial Platform for Next-Generation Urological Biomaterials: Validation in Artificial and Human Urine. In: ACS Biomaterials Science and Engineering .

Sharma, V and Bose, S and Kundu, B and Bodhak, S and Mitun, D and Balla, VK and Basu, B (2020) Probing the Influence of ?-Sterilization on the Oxidation, Crystallization, Sliding Wear Resistance, and Cytocompatibility of Chemically Modified Graphene-Oxide-Reinforced HDPE/UHMWPE Nanocomposites and Wear Debris. In: ACS Biomaterials Science and Engineering, 6 (3). pp. 1462-1475.

Sharma, V and Chowdhury, S and Bose, S and Basu, B (2021) Polydopamine Codoped BaTiO3-Functionalized Polyvinylidene Fluoride Coating as a Piezo-Biomaterial Platform for an Enhanced Cellular Response and Bioactivity. In: ACS Biomaterials Science and Engineering .

Sharma, V and Gupta, RK and Kailas, SV and Basu, B (2022) Probing lubricated sliding wear properties of HDPE/UHMWPE hybrid bionanocomposite. In: Journal of Biomaterials Applications .

Shenoy, BM and Hegde, G and Roy Mahapatra, D (2020) Field enhancement in microfluidic semiconductor nanowire array. In: Biomicrofluidics, 14 (6).

Shinde, Aparna and Hardy, Shana D and Kim, Dongwook and Akhand, Saeed Salehin and Jolly, Mohit Kumar and Wang, Wen-Hung and Anderson, Joshua C and Khodadadi, Ryan B and Brown, Wells S and George, Jason T and Liu, Sheng and Wan, Jun and Levine, Herbert and Willey, Christopher D and Krusemark, Casey J and Geahlen, Robert L and Wendt, Michael K (2019) Spleen Tyrosine Kinase-Mediated Autophagy Is Required for Epithelial-Mesenchymal Plasticity and Metastasis in Breast Cancer. In: CANCER RESEARCH, 79 (8). pp. 1831-1843.

Singh, D and Bocci, F and Kulkarni, P and Jolly, MK (2021) Coupled feedback loops involving PAGE4, EMT and notch signaling can give rise to non-genetic heterogeneity in prostate cancer cells. In: Entropy, 23 (3). pp. 1-16.

Singh, KK and Athira, PJ and Bhardwaj, N and Singh, DP and Watson, U and Saini, DK (2021) Acetylation of Response Regulator Protein MtrA in M. tuberculosis Regulates Its Repressor Activity. In: Frontiers in Microbiology, 11 .

Singh, KK and Singh, DP and Singh, R and Saini, DK (2019) In vitro and in vivo Assessment of Protein Acetylation Status in Mycobacteria. In: Bio-protocol, 9 (13).

Singh, N and Singh, D and Bhide, A and Sharma, R and Sahoo, S and Jolly, MK and Modi, D (2022) Lhx2 in germ cells suppresses endothelial cell migration in the developing ovary. In: Experimental Cell Research, 415 (1).

Singh, Puneet and Lenka, Abhishek and Stezin, Albert and Jhunjhunwala, Ketan and Pal, Pramod Kumar and Ghosal, Ashitava and Murthy, Aditya (2019) Basal ganglia contributions during the learning of a visuomotor rotation: Effect of dopamine, deep brain stimulation and reinforcement. In: EUROPEAN JOURNAL OF NEUROSCIENCE .

Singh, S and Kumbhar, D and Reghu, D and Venugopal, SJ and Rekha, PT and Mohandas, S and Rao, S and Rangaiah, A and Chunchanur, SK and Saini, DK and Umapathy, S (2022) Culture-Independent Raman Spectroscopic Identification of Bacterial Pathogens from Clinical Samples Using Deep Transfer Learning. In: Analytical Chemistry, 94 (42). pp. 14745-14754.

Singh, S and Verma, T and Nandi, D and Umapathy, S (2022) Herbicides 2,4-Dichlorophenoxy Acetic Acid and Glyphosate Induce Distinct Biochemical Changes in E. coli during Phenotypic Antibiotic Resistance: A Raman Spectroscopic Study. In: Journal of Physical Chemistry B .

Soni, S and Toley, BJ (2022) Paper-based nucleic acid sample preparation for point-of-care diagnostics. In: Sensors and Actuators B: Chemical, 355 .

Sreepadmanabh, M and Ganesh, M and Bhat, R and Bhattacharjee, T (2023) Jammed microgel growth medium prepared by flash-solidification of agarose for 3D cell culture and 3D bioprinting. In: Biomedical materials (Bristol, England), 18 (4).

Srinivas, M and Sharma, P and Jhunjhunwala, S (2021) Phagocytic Uptake of Polymeric Particles by Immune Cells under Flow Conditions. In: Molecular Pharmaceutics .

Subbalakshmi, AR and Ashraf, B and Jolly, MK (2022) Biophysical and biochemical attributes of hybrid epithelial/mesenchymal phenotypes. In: Physical Biology, 19 (2).

Subbalakshmi, AR and Kundnani, D and Biswas, K and Ghosh, A and Hanash, SM and Tripathi, SC and Jolly, MK (2020) NFATc Acts as a Non-Canonical Phenotypic Stability Factor for a Hybrid Epithelial/Mesenchymal Phenotype. In: Frontiers in Oncology, 10 .

Subbalakshmi, AR and Sahoo, S and Biswas, K and Jolly, MK (2021) A Computational Systems Biology Approach Identifies SLUG as a Mediator of Partial Epithelial-Mesenchymal Transition (EMT). In: Cells Tissues Organs .

Subbalakshmi, AR and Sahoo, S and Manjunatha, P and Goyal, S and Kasiviswanathan, VA and Mahesh, Y and Ramu, S and McMullen, I and Somarelli, JA and Jolly, MK (2023) The ELF3 transcription factor is associated with an epithelial phenotype and represses epithelial-mesenchymal transition. In: Journal of Biological Engineering, 17 (1).

Subbalakshmi, AR and Sahoo, S and McMullen, I and Saxena, AN and Venugopal, SK and Somarelli, JA and Jolly, MK (2021) Klf4 induces mesenchymal�epithelial transition (Met) by suppressing multiple emt�inducing transcription factors. In: Cancers, 13 (20).

Subhadarshini, S and Markus, J and Sahoo, S and Jolly, MK (2023) Dynamics of Epithelial-Mesenchymal Plasticity: What Have Single-Cell Investigations Elucidated So Far? In: ACS Omega, 8 (13). pp. 11665-11673.

Subramanian, PSG and Jain, A and Shivapuji, AM and Sundaresan, NR and Dasappa, S and Rao, L (2020) Plasma-activated water from a dielectric barrier discharge plasma source for the selective treatment of cancer cells. In: Plasma Processes and Polymers, 17 (8).

Sun, Qingyun and Tu, Rong and Xu, Qingfang and Zhang, Chitengfei and Li, Jun and Ohmori, Hitoshi and Kosinova, Marina and Basu, Bikramjit and Yan, Jiasheng and Li, Shusen and Goto, Takashi and Zhang, Lianmeng and Zhang, Song (2019) Nanoforest of 3C-SiC/graphene by laser chemical vapor deposition with high electrochemical performance. In: JOURNAL OF POWER SOURCES, 444 .

Suneet, K and De, T and Rangarajan, A and Jain, S (2020) Magnetic nanofibers based bandage for skin cancer treatment: a non-invasive hyperthermia therapy. In: Cancer Reports, 3 (6).

Suneet, Kaushik and Sridhar, Shreyas and Agiwal, Purvi and Sridhar, Mittanamalli S and Sanyal, Kaustuv and Jain, Shilpee (2019) Magnetic hyperthermia adjunctive therapy for fungi: in vitro studies against Candida albicans. In: INTERNATIONAL JOURNAL OF HYPERTHERMIA, 36 (1). pp. 545-553.

Surve, Manalee Vishnu and Bhutda, Smita and Datey, Akshay and Anil, Anjali and Rawat, Shalini and Pushpakaran, Athira and Singh, Dipty and Kim, Kwang Sik and Chakravortty, Dipshikha and Banerjee, Anirban (2018) Heterogeneity in pneumolysin expression governs the fate of Streptococcus pneumoniae during blood-brain barrier trafficking. In: PLOS PATHOGENS, 14 (7).

Swain, S and Maithry Shenoy, B and Bhol, P and Yadav, S and Ranjan Jena, S and Hegde, G and Altaee, A and Saxena, M and Samal, AK (2021) Facet dependent catalytic activity of Pd nanocrystals for the remedy of organic Pollutant: A mechanistic study. In: Applied Surface Science, 570 .

Thakur, C and Tripathi, A and Ravichandran, S and Shivananjaiah, A and Chakraborty, A and Varadappa, S and Chikkavenkatappa, N and Nagarajan, D and Lakshminarasimhaiah, S and Singh, A and Chandra, N (2022) A new blood-based RNA signature (R9), for monitoring effectiveness of tuberculosis treatment in a South Indian longitudinal cohort. In: iScience, 25 (2).

Thangavel, Hariprasad and De Angelis, Carmine and Vasaikar, Suhas and Bhat, Raksha and Jolly, Mohit Kumar and Nagi, Chandandeep and Creighton, Chad J and Chen, Fengju and Dobrolecki, Lacey E and George, Jason T and Kumar, Tanya and Abdulkareem, Noor Mazin and Mao, Sufeng and Nardone, Agostina and Rimawi, Mothaffar and Osborne, C. Kent and Lewis, Michael T and Levine, Herbert and Zhang, Bing and Schiff, Rachel and Giuliano, Mario and Trivedi, Meghana (2019) A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. In: JOURNAL OF CLINICAL MEDICINE, 8 (11).

Thankachan, Jerrin Mathew and Nuthalapati, Stephen Sukumar and Tirumala, Nireekshit Addanki and Ananthanarayanan, Vaishnavi (2017) Fission yeast myosin I facilitates PI(4,5)P-2-mediated anchoring of cytoplasmic dynein to the cortex. In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114 (13). E2672-E2681.

Thankamony, AP and Murali, R and Karthikeyan, N and Varghese, BA and Teo, WS and McFarland, A and Roden, DL and Holliday, H and Konrad, CV and Cazet, A and Dodson, E and Yang, J and Baker, LA and George, JT and Levine, H and Jolly, MK and Swarbrick, A and Nair, R (2020) Targeting the id1-kif11 axis in triple-negative breast cancer using combination therapy. In: Biomolecules, 10 (9). pp. 1-15.

Thankamony, AP and Saxena, K and Murali, R and Jolly, MK and Nair, R (2020) Cancer Stem Cell Plasticity � A Deadly Deal. In: Frontiers in Molecular Biosciences, 7 .

Thankamony, AP and Subbalakshmi, AR and Jolly, MK and Nair, R (2021) Lineage plasticity in cancer: The tale of a skin-walker. In: Cancers, 13 (14).

Thimukonda Jegadeesan, J and Baldia, M and Basu, B (2022) Next-generation personalized cranioplasty treatment. In: Acta Biomaterialia .

Tijore, A and Yang, B and Sheetz, M (2022) Cancer cells can be killed mechanically or with combinations of cytoskeletal inhibitors. In: Frontiers in Pharmacology, 13 .

Tirumala, NA and Ananthanarayanan, V (2020) Role of Dynactin in the Intracellular Localization and Activation of Cytoplasmic Dynein. In: Biochemistry, 59 (2). pp. 156-162.

Tirumala, NA and Ananthanarayanan, V (2023) Visualization of Single Dynein Molecules in Mammalian Cells. In: Methods in molecular biology (Clifton, N.J.), 2623 . pp. 87-93.

Tiwari, P and Gosain, TP and Chugh, S and Singh, M and Sankhe, GD and Arora, G and Kidwai, S and Agarwal, S and Saini, DK and Singh, R (2022) Exopolyphosphatases PPX1 and PPX2 from Mycobacterium tuberculosis regulate dormancy response and pathogenesis. In: Microbial Pathogenesis, 173 .

Tiwari, Prabhakar and Gosain, Tannu Priya and Singh, Mamta and Sankhe, Gaurav D and Arora, Garima and Kidwai, Saqib and Agarwal, Sakshi and Chugh, Saurabh and Saini, Deepak K and Singh, Ramandeep (2019) Inorganic polyphosphate accumulation suppresses the dormancy response and virulence in Mycobacterium tuberculosis. In: JOURNAL OF BIOLOGICAL CHEMISTRY, 294 (28). pp. 10819-10832.

Tretyakova, MS and Subbalakshmi, AR and Menyailo, ME and Jolly, MK and Denisov, EV (2022) Tumor Hybrid Cells: Nature and Biological Significance. In: Frontiers in Cell and Developmental Biology, 10 .

Tripathi, S and Chakraborty, P and Levine, H and Jolly, MK (2020) A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. In: PLoS Computational Biology, 16 (2).

Tu, Rong and Hu, Zhiying and Xu, Qingfang and Li, Lin and Yang, Meijun and Li, Qizhong and Shi, Ji and Li, Haiwen and Zhang, Song and Zhang, Lianmeng and Gotoa, Takashi and Ohmori, Hitoshi and Kosinova, Marina and Basu, Bikramjit (2019) Epitaxial growth of 3C-SiC (111) on Si via laser CVD carbonization. In: JOURNAL OF ASIAN CERAMIC SOCIETIES .

Umesh, Sharath and Pant, Shweta and Padma, Srivani and Jana, Sumitash and Vasudevan, Varsha and Murthy, Aditya and Asokan, Sundarrajan (2019) A novel fiber Bragg grating system for eye tracking. In: JOURNAL OF ADVANCED RESEARCH, 16 . pp. 25-34.

Umrao, S and Anusha, S and Jain, V and Chakraborty, B and Roy, R (2019) Smartphone-based kanamycin sensing with ratiometric FRET. In: RSC Advances, 9 (11). pp. 6143-6151.

Vadlamudi, G and Thirumalaikumaran, SK and Chakravortty, D and Saha, A and Basu, S (2022) Penetration and aerosolization of cough droplet spray through face masks: A unique pathway of transmission of infection. In: Physics of Fluids, 34 (5).

Vaiwala, R and Ayappa, KG (2021) A generic force field for simulating native protein structures using dissipative particle dynamics. In: Soft Matter, 17 (42). pp. 9772-9785.

Vaiwala, R and Sharma, P and Puranik, M and Ayappa, KG (2020) Developing a Coarse-Grained Model for Bacterial Cell Walls: Evaluating Mechanical Properties and Free Energy Barriers. In: Journal of Chemical Theory and Computation, 16 (8). pp. 5369-5384.

Valloly, P and Roy, R (2022) Nucleic Acid Quantification with Amplicon Yield in Recombinase Polymerase Amplification. In: Analytical Chemistry, 94 (40). pp. 13897-13905.

Varadarajan, V and Desikan, R and Ayappa, KG (2020) Assessing the extent of the structural and dynamic modulation of membrane lipids due to pore forming toxins: Insights from molecular dynamics simulations. In: Soft Matter, 16 (20). pp. 4840-4857.

Varadharajaperumal, S and Alagarasan, D and Sripan, C and Ganesan, R and Satyanarayan, MN and Hegde, G (2021) Toxic-free surface level sulphur doped 1D Ti-Ox-Sy nanorods for superstrate heterojunction CZTS thin-film solar cells. In: Materials Research Bulletin, 133 .

Varadharajaperumal, S and Alagarasan, Devarajan and Ganesan, R and Satyanarayan, M N and Hegde, Gopalkrishna (2020) Controlled growth of 1D-ZnO nanotubes using one-step hot plate technique for CZTS heterojunction solar cells. In: MATERIALS SCIENCE IN SEMICONDUCTOR PROCESSING, 106 .

Varadharajaperumal, S and Ilango, Murugaiya Sridar and Hegde, Gopalkrishna and Satyanarayan, M N (2019) Effect of CuPc and PEDOT:PSS as hole transport layers in planar heterojunction CdS/CdTe solar cell. In: MATERIALS RESEARCH EXPRESS, 6 (9).

Varghese, A and Ray, S and Verma, T and Nandi, D (2020) Multicellular String-Like Structure Formation by Salmonella Typhimurium Depends on Cellulose Production: Roles of Diguanylate Cyclases, YedQ and YfiN. In: Frontiers in Microbiology, 11 .

Varsha, V and Murthy, A and Padhi, R (2021) A Stochastic Optimal Control Model with Internal Feedback and Velocity Tracking for Saccadic Eye Movements. In: Biomedical Signal Processing and Control, 68 .

Vasudevan, V and Gopal, A and Jana, S and Padhi, R and Murthy, A (2023) Velocity tracking control best explains the modulation of saccade kinematics during eye–hand coordination. In: European Journal of Neuroscience .

Vemparala, B and Parambathu, AV and Saini, DK and Dixit, NM (2022) An Evolutionary Paradigm Favoring Cross Talk between Bacterial Two-Component Signaling Systems. In: mSystems, 7 (6).

Venkatasubramanian, G and Kelkar, DA and Mandal, S and Jolly, MK and Kulkarni, M (2022) Analysis of Yes-Associated Protein-1 (YAP1) Target Gene Signature to Predict Progressive Breast Cancer. In: Journal of Clinical Medicine, 11 (7).

Vennettilli, M and Saha, S and Roy, U and Mugler, A (2021) Precision of Protein Thermometry. In: Physical Review Letters, 127 (9).

Verma, T and Annappa, H and Singh, S and Umapathy, S and Nandi, D (2020) Profiling antibiotic resistance in Escherichia coli strains displaying differential antibiotic susceptibilities using Raman spectroscopy. In: Journal of Biophotonics . (In Press)

Verma, T and Annappa, H and Singh, S and Umapathy, S and Nandi, D (2021) Profiling antibiotic resistance in Escherichia coli strains displaying differential antibiotic susceptibilities using Raman spectroscopy. In: Journal of Biophotonics, 14 (1).

Verma, T and Majumdar, S and Yadav, S and Ahmed, SM and Umapathy, S and Nandi, D (2021) Cell-free hemoglobin is a marker of systemic inflammation in mouse models of sepsis: A Raman spectroscopic study. In: Analyst, 146 (12). pp. 4022-4032.

Verma, Taru and Bhaskarla, Chetana and Sadhir, Ismath and Sreedharan, Syama and Nandi, Dipankar (2018) Non-steroidal anti-inflammatory drugs, acetaminophen and ibuprofen, induce phenotypic antibiotic resistance in Escherichia coli: roles of marA and acrB. In: FEMS MICROBIOLOGY LETTERS, 365 (22).

Vilchez Mercedes, SA and Bocci, F and Ahmed, M and Eder, I and Zhu, N and Levine, H and Onuchic, JN and Jolly, MK and Wong, PK (2022) Nrf2 Modulates the Hybrid Epithelial/Mesenchymal Phenotype and Notch Signaling During Collective Cancer Migration. In: Frontiers in Molecular Biosciences, 9 .

Vilchez Mercedes, SA and Bocci, F and Levine, H and Onuchic, JN and Jolly, MK and Wong, PK (2021) Decoding leader cells in collective cancer invasion. In: Nature Reviews Cancer .

Vishaka, V H and Saxena, Manav and Balakrishna, Geetha R and Latiyan, Sachin and Jain, Shilpee (2019) Remarkably selective biocompatible turn-on fluorescent probe for detection of Fe3+ in human blood samples and cells. In: RSC ADVANCES, 9 (47). pp. 27439-27448.

Voigt, SP and Ravikumar, K and Basu, B and Kalidindi, SR (2021) Automated Image Processing Workflow for Morphological Analysis of Fluorescence Microscopy Cell Images. In: JOM, 73 . pp. 2356-2365.

Wang, P and Zhou, R and Thomas, P and Zhao, L and Zhou, R and Mandal, S and Jolly, MK and Richard, DJ and Rehm, BHA and Ostrikov, K and Dai, X and Williams, ED and Thompson, EW (2021) Epithelial-to-mesenchymal transition enhances cancer cell sensitivity to cytotoxic effects of zcold atmospheric plasmas in breast and bladder cancer systems. In: Cancers, 13 (12).

Ware, KE and Thomas, BC and Olawuni, PD and Sheth, MU and Hawkey, N and Yeshwanth, M and Miller, BC and Vietor, KJ and Jolly, MK and Kim, SY and Armstrong, AJ and Somarelli, JA (2023) A synthetic lethal screen for Snail-induced enzalutamide resistance identifies JAK/STAT signaling as a therapeutic vulnerability in prostate cancer. In: Frontiers in Molecular Biosciences, 10 .

Waturuocha, UW and Athira, PJ and Singh, KK and Malhotra, V and Krishna, MS and Saini, DK (2021) A high-frequency single nucleotide polymorphism in the MtrB sensor kinase in clinical strains of Mycobacterium tuberculosis alters its biochemical and physiological properties. In: PLoS ONE, 16 (9 Sept).

Xu, Qingfang and Tu, Rong and Sun, Qingyun and Yang, Meijun and Li, Qizhong and Zhang, Song and Zhang, Lianmeng and Goto, Takashi and Ohmori, Hitoshi and Shi, Ji and Li, Haiwen and Kosinova, Marina and Bikramjit, Basu (2019) Morphology controlling of < 111 >-3C-SiC films by HMDS flow rate in LCVD. In: RSC ADVANCES, 9 (5). pp. 2426-2430.

Xu, S and Ware, KE and Ding, Y and Kim, SY and Sheth, MU and Rao, S and Chan, W and Armstrong, AJ and Eward, WC and Jolly, MK and Somarelli, JA (2019) An integrative systems biology and experimental approach identifies convergence of epithelial plasticity, metabolism, and autophagy to promote chemoresistance. In: Journal of Clinical Medicine, 8 (2).

Yadav, S and Singh, AK and Agrahari, AK and Pandey, AK and Gupta, MK and Chakravortty, D and Tiwari, VK and Prakash, P (2021) Galactose-clicked curcumin-mediated reversal of meropenem resistance among klebsiella pneumoniae by targeting its carbapenemases and the AcrAB-TolC efflux system. In: Antibiotics, 10 (4).

Editorials/Short Communications

Adler, FR and Anderson, ARA and Bhushan, A and Bogdan, P and Bravo-Cordero, JJ and Brock, A and Chen, Y and Cukierman, E and DelGiorno, KE and Denis, GV and Ferrall-Fairbanks, MC and Gartner, ZJ and Germain, RN and Gordon, DM and Hunter, G and Jolly, MK and Karacosta, LG and Mythreye, K and Katira, P and Kulkarni, RP and Kutys, ML and Lander, AD and Laughney, AM and Levine, H and Lou, E and Lowenstein, PR and Masters, KS and Pe'er, D and Peyton, SR and Platt, MO and Purvis, JE and Quon, G and Richer, JK and Riddle, NC and Rodriguez, A and Snyder, JC and Lee Szeto, G and Tomlin, CJ and Yanai, I and Zervantonakis, IK and Dueck, H (2023) Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation. In: Cell Systems, 14 (4). pp. 252-257.

Ananthanarayanan, V (2020) Voices of the new generation: mentorship as a junior PI. In: Nature Reviews Molecular Cell Biology, 21 (10). p. 562.

Capp, J-P and Jolly, MK and Sharma, A (2021) Editorial: Non-Genetic Heterogeneity in Development and Disease. In: Frontiers in Genetics, 12 .

Chandra, N and Menon, GI (2020) Editorial overview: Biophysical and computational methods. In: Current Opinion in Structural Biology .

Culig, Z and Jolly, MK and Souček, K (2023) Editorial: Heterogeneity and plasticity of prostate cancer. In: Frontiers in Molecular Biosciences, 10 .

Jhunjhunwala, Siddharth (2018) Editorial: Immunoengineering-From Biologics to Biomaterials. In: JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE, 98 (1). pp. 3-4.

Jolly, MK and Roy, S (2022) Editorial: Topical Collection on Emergent Dynamics of Biological Networks. In: Journal of Biosciences, 47 (4).

Mattei, F and Jolly, MK (2023) Interdisciplinary research in cancer and immunity employing biophysical approaches. In: iScience, 26 (5).

Padmanabhan, Pranesh and Dixit, Narendra M (2017) Inhibitors of hepatitis C virus entry may be potent ingredients of optimal drug combinations. In: Proceedings of the National Academy of Sciences, 114 (23). E4524 -E4526. ISSN 0027-8424

Ponmalar, Ilanila Ilangumaran (2019) Elucidating the Effect of Listeriolysin O Structural Intermediates on Lipid Diffusivity. In: https://www.sciencedirect.com/science/article/abs/pii/S0006349518340372, 16 (3). 514a.

Sathyanarayana, Pradeep and Maurya, Satyaghosh and Ayappa, Ganapathy and Visweswariah, Sandhya S and Roy, Rahul (2017) Studying Binding, Conformational Transition and Assembly of E. Coli Cytolysin a Pore Forming Toxin by Single Molecule Fluorescence. In: BIOPHYSICAL JOURNAL, 112 (3, 1). 524A.

Saxena, K and Subbalakshmi, AR and Jolly, MK (2019) Phenotypic heterogeneity in circulating tumor cells and its prognostic value in metastasis and overall survival. In: EBioMedicine, 46 . pp. 4-5.

Tiwari, A and Dixit, NM (2023) A physical tug-of-war and the evolution of immune cells. In: Journal of Biosciences, 48 (3).

Tripathi, SC and Jolly, MK and Mani, SA and Levine, H (2021) Editorial: Characterizing the Multi-Faceted Dynamics of Tumor Cell Plasticity. In: Frontiers in Molecular Biosciences, 7 .

This list was generated on Thu Sep 21 20:27:27 2023 IST.