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Ramakumar, Suryanarayanarao and Viswamitra, MA and Mohan, PM and Sastry, PS (1995) X-Ray Studies On The Bilayer Structure Of Trypsin-Treated Rat-Brain Myelin. In: Multidisciplinary Interaction Meeting on Neurosciences,Indian Inst Sci, Dept Phys, Bangalore, India, APR 16-18, 1993, Bangalore, India.
Bansia, Harsh and Bagaria, Shradha and Karande, Anjali Anoop and Ramakumar, Suryanarayanarao (2019) Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10. In: FEBS JOURNAL, 286 (5). pp. 1003-1029.
Ramesh, Madhu and Makam, Pandeeswar and Voshavar, Chandrashekhar and Khare, Harshavardhan and Rajasekhar, Kolla and Ramakumar, Suryanarayanarao and Govindaraju, Thimmaiah (2018) L-Dopa and dopamine conjugated naphthalenediimides modulate amyloid beta toxicity. In: ORGANIC & BIOMOLECULAR CHEMISTRY, 16 (41). pp. 7682-7692.
Khare, Harshavardhan and Dey, Debayan and Madhu, Chilakapati and Senapati, Dillip and Raghothama, Srinivasarao and Govindaraju, Thimmaiah and Ramakumar, Suryanarayanarao (2017) Conformational heterogeneity in tails of DNA-binding proteins is augmented by proline containing repeats. In: MOLECULAR BIOSYSTEMS, 13 (12). pp. 2531-2544.
Das, Sreetama and Bhadra, Pratiti and Ramakumar, Suryanarayanarao and Pal, Debnath (2017) Molecular Dynamics Information Improves cis-Peptide-Based Function Annotation of Proteins. In: JOURNAL OF PROTEOME RESEARCH, 16 (8). pp. 2936-2946.
Dey, Debayan and Nagaraja, Valakunja and Ramakumar, Suryanarayanarao (2017) Structural and evolutionary analyses reveal determinants of DNA binding specificities of nucleoid-associated proteins HU and IHF. In: MOLECULAR PHYLOGENETICS AND EVOLUTION, 107 . pp. 356-366.
Das, Sreetama and Pawale, Vijaykumar S and Dadireddy, Venkatareddy and Singh, Avinash Kumar and Ramakumar, Suryanarayanarao and Roy, Rajendra P (2017) Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference. In: JOURNAL OF BIOLOGICAL CHEMISTRY, 292 (17). pp. 7244-7257.
Mir, Mushtaq Ahmad and Arumugam, Muthu and Mondal, Sukanta and Rajeswari, Haryadi S and Ramakumar, Suryanarayanarao and Ajitkumar, Parthasarathi (2015) Mycobacterium tuberculosis Cell Division Protein, FtsE, is an ATPase in Dimeric Form. In: PROTEIN JOURNAL, 34 (1). pp. 35-47.
Mahanta, Pranjal and Bhardwaj, Amit and Kumar, Krishan and Reddy, Vanga S and Ramakumar, Suryanarayanarao (2015) Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)(8)-triosephosphate isomerase barrel enzyme. In: FEBS JOURNAL, 282 (18). pp. 3543-3555.
Mohanta, Vaishakhi and Dey, Debayan and Ramakumar, Suryanarayanarao and Patil, Satish (2015) Vesicular Nanostructure Formation by Self-Assembly of Anisotropic Penta-phenol-Substituted Fullerene in Water. In: LANGMUIR, 31 (50). pp. 13600-13608.
Pandeeswar, M and Khare, Harshavardhan and Ramakumar, Suryanarayanarao and Govindaraju, T (2014) Biomimetic molecular organization of naphthalene diimide in the solid state: tunable (chiro-) optical, viscoelastic and nanoscale properties. In: RSC ADVANCES, 4 (39). pp. 20154-20163.
Das, Sreetama and Ramakumar, Suryanarayanarao and Pal, Debnath (2014) Identifying functionally important cis-peptide containing segments in proteins and their utility in molecular function annotation. In: FEBS JOURNAL, 281 (24). pp. 5602-5621.
Parween, Shaheena and Misra, Anurag and Ramakumar, Suryanarayanarao and Chauhan, VS (2014) Self-assembled dipeptide nanotubes constituted by flexible beta-phenylalanine and conformationally constrained alpha,beta-dehydrophenylalanine residues as drug delivery system. In: JOURNAL OF MATERIALS CHEMISTRY B, 2 (20). pp. 3096-3106.
Bhowmick, Tuhin and Ghosh, Soumitra and Dixit, Karuna and Ganesan, Varsha and Ramagopal, Udupi A and Dey, Debayan and Sarma, Siddhartha P and Ramakumar, Suryanarayanarao and Nagaraja, Valakunja (2014) Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors. In: NATURE COMMUNICATIONS, 5 .
Mishra, Aseem and Misra, Anurag and Vaishnavi, SriT and Thota, Chaitanya and Gupta, Madhvi and Ramakumar, Suryanarayanarao and Chauhan, VS (2013) Conformationally restricted short peptides inhibit human islet amyloid polypeptide (hIAPP) fibrillization. In: CHEMICAL COMMUNICATIONS, 49 (26). pp. 2688-2690.
Shaik, Noor M and Misra, Anurag and Singh, Somesh and Fatangare, Amol B and Ramakumar, Suryanarayanarao and Rawal, Shuban K and Khan, Bashir M (2013) Functional characterization, homology modeling and docking studies of beta-glucosidase responsible for bioactivation of cyanogenic hydroxynitrile glucosides from Leucaena leucocephala (subabul). In: MOLECULAR BIOLOGY REPORTS, 40 (2). pp. 1351-1363.
Lahiri, Debojyoti and Bhowmick, Tuhin and Banik, Bhabatosh and Railkar, Reema and Ramakumar, Suryanarayanarao and Dighe, Rajan R and Chakravarty, Akhil R (2010) Photocytotoxic and anaerobic DNA cleavage activity of binuclear 3,3 '-dithiodipropionic acid cobalt(II) complexes having phenanthroline bases. In: Polyhedron, 29 (12). pp. 2417-2425.
Bhardwaj, Amit and Leelavathi, Sadhu and Mazumdar-Leighton, Sudeshna and Ghosh, Amit and Ramakumar, Suryanarayanarao and Reddy, Vanga S (2010) The Critical Role of N- and C-Terminal Contact in Protein Stability and Folding of a Family 10 Xylanase under Extreme Conditions. In: PLos One, 5 (6).
Patra, Ashis K and Bhowmick, Tuhin and Roy, Sovan and Ramakumar, Suryanarayanarao and Chakravarty, Alkhil R (2009) Copper(II) Complexes of l-Arginine as Netropsin Mimics Showing DNA Cleavage Activity in Red Light. In: Inorganic Chemistry, 48 (7). pp. 2932-2943.
Parthiban, Marimuthu and Rajasekaran, Mohan Babu and Ramakumar, Suryanarayanarao and Shanmughavel, Piramanayagam (2009) Molecule Modeling of Human Pentameric alpha(7) Neuronal Nicotinic Acetylcholine Receptor and Its Interaction with its Agonist and Competitive Antagonist. In: Journal Of Biomolecular Structure & Dynamics, 26 (5). pp. 535-547.
Lahiri, Debojyoti and Bhowmick, Tuhin and Pathak, Biswarup and Shameema, Oottikkal and Patra, Ashis K and Ramakumar, Suryanarayanarao and Chakravarty, AR (2009) Anaerobic Photocleavage of DNA in Red Light by Dicopper(II) Complexes of 3,3'-Dithiodipropionic Acid. In: Inorganic Chemistry, 48 (01). pp. 339-349.
Gupta, Madhvi and Acharya, Rudresh and Mishra, Aseem and Ramakumar, Suryanarayanarao and Ahmed, Faizan and Chauhan, VS (2008) Dehydrophenylalanine (\Delta Phe) as a \beta Breaker:Extended Structure Terminated by a \Delta Phe-Induced Turn in the Pentapeptide Boc-Phe1-Ala2-Ile3-\Delta Phe4-Ala5-OMe. In: ChemBioChem, 9 (9). pp. 1375-1378.
Patra, Ashis K and Bhowmick, Tuhin and Ramakumar, Suryanarayanarao and Nethaji, Munirathinam and Chakravarty, Akhil R (2008) DNA cleavage in red light promoted by copper(II) complexes of -amino acids and photoactive phenanthroline bases. In: Dalton Transactions (48). pp. 6966-6976.
Roy, Mithun and Bhowmick, Tuhin and Ramakumar, Suryanarayanarao and Nethaji, Munirathinam and Chakravarty, Akhil R (2008) Double-strand DNA cleavage from photodecarboxylation of (\mu-oxo)diiron(III) L-histidine complex in visible light. In: Dalton Transactions (27). pp. 3542-3545.
Manikandan, Karuppasamy and Pal, Debnath and Ramakumar, Suryanarayanarao and Brener, Nathan E and Iyengar, Sitharama S and Seetharaman, Guna (2008) Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments. In: Genome Biology, 9 (3). R52.1-R52.18.
Patra, Ashis K and Bhowmick, Tuhin and Ramakumar, Suryanarayanarao and Chakravarty, Akhil R (2007) Metal-Based Netropsin Mimics Showing AT-Selective DNA Binding and DNA Cleavage Activity at Red Light. In: Inorganic Chemistry:Communication, 46 (22). pp. 9030-9032.
Acharya, Rudresh and Gupta, Madhvi and Ramakumar, Suryanarayanarao and Ramagopal, Udupi A and Chauhan, VS (2007) Observation of glycine zipper and unanticipated occurrence of ambidextrous helices in the crystal structure of a chiral undecapeptide. In: BMC Structural Biology, 7 (51). pp. 1-9.
Gupta, Madhavi and Bagaria, Ashima and Mishra, Aseem and Mathur, Puniti and Basu, Atanu and Ramakumar, Suryanarayanarao and Chauhan, VS (2007) Self-assembly of a dipeptide-containing conformationally restricted dehydrophenylalanine residue to form ordered nanotubes. In: Advanced Materials, 19 (6). pp. 858-861.
Bagaria, Ashima and Surendranath, Kalpana and Ramagopal, Udupi A and Ramakumar, Suryanarayanarao and Karande, Anjali A (2006) Structure-Function Analysis and Insights into the Reduced Toxicity of Abrus precatorius Agglutinin I in Relation to Abrin. In: Journal of Biological Chemistry, 281 (45). pp. 34465-34474.
Mondal, Sukanta and Rajasekaran, Mohan B and Rajasekaran, Bhavna and Ramakumar, Suryanarayanarao (2006) I-conotoxin superfamily revisited. In: Journal of Peptide Science, 12 (11). 679- 685.
Mathur, P and Ramagopal, UA and Ramakumar, Suryanarayanarao and Jagannathan, NR and Chauhan, VS (2006) Stabilization of unusual structures in peptides using alpha,beta-dehydrophenylalanine: Crystal and solution structures of Boc-Pro-Delta Phe-Val-Delta Phe-Ala-OMe and Boc-Pro-Delta Phe-Gly-Delta Phe-Ala-OMe. In: Biopolymers, 84 (3). pp. 298-309.
Gupta, Kshitiz and Thomas, Dina and Vidya, SV and Venkatesh, KV and Ramakumar, Suryanarayanarao (2005) Detailed protein sequence alignment based on Spectral Similarity Score (SSS). In: BMC Bioinformatics, 6 (105). pp. 1-16.
Rudresh, * and Gupta, Madhvi and Ramakumar, Suryanarayanarao and Chauhan, VS (2005) Helix packing motif common to the crystal structures of two undecapeptides containing dehydrophenylalanine residues: Implications for the de novo design of helical bundle super secondary structural modules. In: Peptide Science, 9999 (9999). pp. 1-29.
Mondal, Sukanta and Vijayan, Ramachandran and Shichina, Kannambath and Babu, Rajasekaran Mohan and Ramakumar, Suryanarayanarao (2005) I-Superfamily Conotoxins: Sequence and Structure Analysis. In: In Silico Biology, 5 (5-6). 557 - 571.
Rudresh, * and Ramakumar, Suryanarayanarao and Ramagopal, Udupi A and Inai, Yoshihito and Goel, Suchi and Sahal, Dinkar and Chauhan, VS (2004) De Novo Design and Characterization of a Helical Hairpin Eicosapeptide: Emergence of an Anion Receptor in the Linker Region. In: Structure, 12 (3). pp. 389-396.
Ramagopal, Udupi A and Ramakumar, Suryanarayanarao and Mathur, Puniti and Joshi, Ratanmani and Chauhan, VS (2002) Dehydrophenylalanine zippers: strong helix-helix clamping through a network of weak interactions. In: Protein Engineering, 15 (4). pp. 331-335.
Ramagopal, Udupi A and Ramakumar, Suryanarayanarao and Sahal, Dinkar and Chauhan, VS (2001) De novo design and characterization of an apolar helical hairpin peptide at atomic resolution: Compaction mediated by weak interactions. In: Proceedings of the National Academy of Sciences of the United States of America, 98 (3). 870-874.
Jain, RM and Rajashankar, KR and Ramakumar, Suryanarayanarao and Chauhan, VS (1997) First Observation of Left-Handed Helical Conformation in a Dehydro Peptide Containing Two l-Val Residues. Crystal and Solution Structure of Boc-l-Val-ΔPhe-ΔPhe-ΔPhe-l-Val-OMe. In: Journal Of The American Chemical Society, 119 (14). pp. 3205-3211.
Rajashankar, Kanagalaghatta Ramabhatta and Ramakumar, Suryanarayanarao and Mal, Tapas Kumar and Jain, Ratan Mani and Chauhan, VS (1996) Schellman Motif in Dehydrooligopeptides: Crystal and Molecular Structure of Boc-Val- \bigtriangleup Phe-Leu-Phe-Ala- \bigtriangleup Phe-Leu-OMe. In: Angewandte Chemie International Edition in English, 35 (7). pp. 765-768.
Rajashankar, Kanagalaghatta Ramabhatta and Ramakumar, Suryanarayanarao and Mal, Tapas Kumar and Chauhan, VS (1994) Synthesis, Crystal and Molecular Structure of Boc-Pro- \bigtriangleup Phe- Ala- \bigtriangleup Phe- Ala-OMe ; A Pentapeptide with a Novel \beta -Bend Ribbon Structure. In: Angewandte Chemie International Edition in English, 33 (9). pp. 970-973.
Ramakumar, Suryanarayanarao and Venkatesan, K and Rao, ST (1977) The Crystal and Molecular Structure of l-(Diphenylmethyl)azetidin-3-ol. In: Acta Crystallographica Section B Structural Crystallography and Crystal Chemistry, 33 (3). pp. 824-829.
