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Rakesh, Ramachandran and Joseph, Agnel Praveen and Bhaskara, Ramachandra M and Srinivasan, Narayanaswamy (2016) Structural and mechanistic insights into human splicing factor SF3b complex derived using an integrated approach guided by the cryo-EM density maps. In: RNA BIOLOGY, 13 (10). pp. 1025-1040.
Bhat, Prasanna and Shwetha, Shivaprasad and Sharma, Divya Khandige and Joseph, Agnel Praveen and Srinivasan, Narayanaswamy and Das, Saumitra (2015) The beta hairpin structure within ribosomal protein S5 mediates interplay between domains II and IV and regulates HCV IRES function. In: NUCLEIC ACIDS RESEARCH, 43 (5). pp. 2888-2901.
Joseph, Agnel Praveen and Bhat, Prasanna and Das, Saumitra and Srinivasan, Narayanaswamy (2014) Re-analysis of cryoEM data on HCV IRES bound to 40S subunit of human ribosome integrated with recent structural information suggests new contact regions between ribosomal proteins and HCV RNA. In: RNA BIOLOGY, 11 (7). pp. 891-905.
Leonard, Sylvain and Joseph, Agnel Praveen and Srinivasan, Narayanaswamy and Gelly, Jean-Christophe and de Brevern, Alexandre G (2014) mulPBA: an efficient multiple protein structure alignment method based on a structural alphabet. In: JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 32 (4). pp. 661-668.
Joseph, Agnel Praveen and Srinivasan, Narayanaswamy and de Brevern, Alexandre G (2012) Progressive structure-based alignment of homologous proteins: Adopting sequence comparison strategies. In: BIOCHIMIE, 94 (9). pp. 2025-2034.
Joseph, Agnel Praveen and Valadie, Helene and Srinivasan, Narayanaswamy and de Brevern, Alexandre G. (2012) Local Structural Differences in Homologous Proteins: Specificities in Different SCOP Classes. In: PLOS ONE, 7 (6).
Joseph, Agnel Praveen and Srinivasan, Narayanaswamy and de Brevern, AlexandreG (2012) Cis-trans peptide variations in structurally similar proteins. In: AMINO ACIDS, 43 (3). pp. 1369-1381.
Joseph, Agnel Praveen and Srinivasan, N and de Brevern, Alexandre G (2011) Improvement of protein structure comparison using a structural alphabet. In: Biochimie, 93 (9). pp. 1434-1445.
Gelly, Jean-Christophe and Joseph, Agnel Praveen and Srinivasan, Narayanaswamy and de Brevern, Alexandre G (2011) iPBA: a tool for protein structure comparison using sequence alignment strategies. In: Nucleic Acids Research, 39 (2). W18-W23.
Kandathil, Abraham Joseph and Joseph, Agnel Praveen and Kannangai, Rajesh and Srinivasan, Narayanaswamy and Abraham, Oriapadickal Cherian and Pulimood, Susanne Alexander and Sridharan, Gopalan (2009) Structural Basis of Drug Resistance by Genetic Variants of HIV Type 1 Clade C Protease from India. In: AIDS Research and Human Retroviruses, 25 (5). pp. 511-519.
