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Vashisht, Rohit and Mondal, Anupam Kumar and Jain, Akanksha and Shah, Anup and Vishnoi, Priti and Priyadarshini, Priyanka and Bhattacharyya, Kausik and Rohira, Harsha and Bhat, Ashwini G and Passi, Anurag and Mukherjee, Keya and Choudhary, Kumari Sonal and Kumar, Vikas and Arora, Anshula and Munusamy, Prabhakaran and Subramanian, Ahalyaa and Venkatachalam, Aparna and Gayathri, S and Raj, Sweety and Chitra, Vijaya and Verma, Kaveri and Zaheer, Salman and Balaganesh, J and Gurusamy, Malarvizhi and Razeeth, Mohammed and Raja, Ilamathi and Thandapani, Madhumohan and Mevada, Vishal and Soni, Raviraj and Rana, Shruti and Ramanna, Girish Muthagadhalli and Raghavan, Swetha and Subramanya, Sunil N and Kholia, Trupti and Patel, Rajesh and Bhavnani, Varsha and Chiranjeevi, Lakavath and Sengupta, Soumi and Singh, Pankaj Kumar and Atray, Naresh and Gandhi, Swati and Avasthi, Tiruvayipati Suma and Nisthar, Shefin and Anurag, Meenakshi and Sharma, Pratibha and Hasija, Yasha and Dash, Debasis and Sharma, Arun and Scaria, Vinod and Thomas, Zakir and Chandra, Nagasuma and Brahmachari, Samir K and Bhardwaj, Anshu and Consortium, OSDD (2012) Crowd Sourcing a New Paradigm for Interactome Driven Drug Target Identification in Mycobacterium tuberculosis. In: PLOS ONE, 7 (7).
Bhardwaj, Anshu and Scaria, Vinod and Raghava, Gajendra Pal Singh and Lynn, Andrew Michael and Chandra, Nagasuma and Banerjee, Sulagna and Raghunandanan, Muthukurussi V and Pandey, Vikas and Taneja, Bhupesh and Yadav, Jyoti and Dash, Debasis and Bhattacharya, Jaijit and Misra, Amit and Kumar, Anil and Ramachandran, Srinivasan and Thomas, Zakir and Brahmachari, Samir K (2011) Open source drug discovery- A new paradigm of collaborative research in tuberculosis drug development. In: Tuberculosis, 91 (5, SI). pp. 479-486.
Anand, Praveen and Sankaran, Sandhya and Mukherjee, Sumanta and Yeturu, Kalidas and Laskowski, Roman and Bhardwaj, Anshu and Bhagavat, Raghu and Brahmachari, Samir K and Chandra, Nagasuma and Consortium, OSDD (2011) Structural Annotation of Mycobacterium tuberculosis Proteome. In: PLos One, 6 (10).
Prakash, Tulika and Sandhu, Kuljeet Singh and Singh, Nitin Kumar and Bhasin, Yasha and Ramakrishnan, C and Brahmachari, Samir K (2007) Structural assessment of glycyl mutations in invariantly conserved motifs. In: Proteins: Structure, Function, and Bioinformatics, 69 (3). 617- 632.
Pillai, Beena and Verma, Jiyoti and Abraham, Anju and Francis, Princy and Kumar, Yadunanda and Tatu, Utpal and Brahmachari, Samir K and Sadhale, Parag P (2003) Whole genome expression profiles of yeast RNA polymerase II core subunit, Rpb4, in stress and nonstress conditions. In: Journal of Biological Chemistry, 278 (5). pp. 3339-3346.
Choudhry, Shweta and Mukerji, Mitali and Srivastava, Achal K and Jain, Satish and Brahmachari, Samir K (2001) CAG repeat instability at SCA2 locus: anchoring CAA interruptions and linked single nucleotide polymorphisms. In: Human Molecular Genetics, 10 (21). pp. 2437-2446.
Pataskar, Shashank S and Dash, Debasis and Brahmachari, Samir K (2001) Intramolecular i-motif Structure at Acidic pH for Progressive Myoclonus Epilepsy (EPM1) Repeat $d(CCCCGCCCCGCG)_n$. In: Journal of Biomolecular Structure & Dynamics,, 19 (2). pp. 307-314.
Maiti, Amit K and Brahmachari, Samir K (2001) Poly purine.pyrimidine sequences upstream of the beta-galactosidase gene affect gene expression in Saccharomyces cerevisiae. In: BMC Molecular Biology, 2 (11).
Pataskar, Shashank S and Dash, Debasis and Brahmachari, Samir K (2001) Progressive Myoclonus Epilepsy [EPM1] repeat $d(CCCCGCCCCGCG)_n$ forms folded hairpin structures at physiological pH. In: Journal of Biomolecular Structure & Dynamics, 19 (2). pp. 293-306.
Pillai, Beena and Brahmachari, Samir K and Sadhale, Parag P (2001) Genome-wide expression profile of RNA polymerase II subunit mutant of yeast using microarray technology. In: Current Science, 81 (5). pp. 574-578.
Saleem, Quasar and Anand, Anuranjan and Jain, Sanjeev and Brahmachari, Samir K (2001) The polyglutamine motif is highly conserved at the Clock locus in various organisms and is not polymorphic in humans. In: Human Genetics, 109 (2). pp. 136-142.
Srivastava, Achal K and Choudhry, Shweta and Gopinath, Musuwadi S and Roy, Sanghamitra and Tripathi, Manjari and Brahmachari, Samir K and Jain, Satish (2001) Molecular and clinical correlation in five Indian families with spinocerebellar ataxia 12. In: Annals of Neurology, 50 (6). pp. 796-800.
Saleem, Quasar and Choudhry, Shweta and Mukerji, Mitali and Bashyam, Leena and Padma, Madakasira V and Chakravarthy, Ambar and Maheshwari, Mool Chand and Jain, Satish and Brahmachari, Samir K (2000) Molecular analysis of autosomal dominant hereditary ataxias in the Indian population: high frequency of SCA2 and evidence for a common founder mutation. In: Human Genetics, 106 (2). pp. 179-187.
Raghavan, Sowmya and Hariharan, Ramesh and Brahmachari, Samir K (2000) Polypurine.polypyrimidine sequences in complete bacterial genomes: preference for polypurines in protein-coding regions. In: GENE, 242 (1-2). pp. 275-283.
Saleem, Quasar and Sreevidya, VS and Sudhir, J and Savithri, Vijaya J and Gowda, Y and Rao, Chandrika B and Benegal, V and Majumder, Partha P and Anand, Anuranjan and Brahmachari, Samir K and Jain, Sanjeev (2000) Association analysis of CAG repeats at the KCNN3 locus in Indian patients with bipolar disorder and schizophrenia. In: American Journal of Medical Genetics, 96 (6). pp. 744-748.
Saleem, Quasar and Vijayakumar, M and Mutsuddi, Mousumi and Chowdhary, Neerja and Jain, Sanjeev and Brahmachari, Samir K (1998) Variation at the MJD locus in the major psychoses. In: American Journal of Medical Genetics, 81 (5). pp. 440-442.
Raghavan, Sowmya and Burma, Pradeep K and Brahmachari, Samir K (1997) Positional Preferences of Polypurine/Polypyrimidine Tracts in Saccharomyces cerevisiae Genome: Implications for cis Regulation of Gene Expression. In: Journal of Molecular Evolution, 45 (5). pp. 485-498.
Brahmachari, Samir K and Sarkar, Partha S and Raghavan, Sowmya and Narayan, Malathy and Maiti, Amit K (1997) Polypurine/polypyrimidine sequences as cis-acting transcriptional regulators. In: Gene, 190 (1). pp. 17-26.
Nagaich, Akhilesh K. and Bhattacharyya, Dhanaqjay and Brahmachari, Samir K and Bansal, Manju (1994) CA\TG Sequence at the 5'end of Oligo(A)-tracts Strongly Modulates DNA Curvature. In: Journal of Biological Chemistry , 269 (10). 7824-7833. .
Sarkar, Partha S and Brahmachari, Samir K (1992) Intramolecular triplex potential sequence within a gene down regulates its expression in vivo. In: Nucleic Acids Research, 20 (21). pp. 5713-5718.
Balagurumoorthy, P and Brahmachari, Samir K and Mohanty, Debasisa and Bansal, Manju and Sasisekharan, V (1992) Hairpin and parallel quartet structures for telomeric sequences. In: Nucleic Acids Research, 20 (15). pp. 4061-4067.
Bagga, Rajesh and Ramesh, N and Brahmachari, Samir K (1990) Supercoil-induced unusual DNA sturctures as transcriptional block. In: Nucleic Acids Research, 18 (11). pp. 3363-3369.
Meera, G and Ramesh, N and Brahmachari, Samir K (1989) Zintrons in rat \alpha-lactalbumin gene. In: FEBS Letters, 251 (1-2). pp. 245-249.
Brahmachari, Vani and Nagasuma, R and Brahmachari, Samir K (1989) Preparation of megabase DNA from adult insects and mammalian spleen for pulsed-field gel electrophoresis. In: Journal of Genetics, 68 (3). pp. 185-186.
Mishra, Rakesh K and Latha, PK and Brahmachari, Samir K (1988) Interruptions of (CG)n sequences by GG, TG and CA need not prevent B to Z transition in solution. In: Nucleic Acids Research, 16 (10). pp. 4651-4665.
Brahmachari, Samir K and ShoucheCharles, YS and Cantor, R and McClelland, Michael (1987) Sequences that adopt non-B-DNA conformation in form V DNA as probed by enzymic methylation. In: Journal of Molecular Biology, 193 (1). pp. 201-211.
Majumder, Kumud and Brahmachari, Samir K and Sasisekharan, V (1986) Sequence dependence and role of 5'-phosphate in the B to Z transition. In: FEBS Letters, 198 (2). 240 -244.
Majumder, Kumud and Latha, PK and Brahmachari, Samir K (1986) Use of a volatile buffer at ambient temperature *1: Versatile approach to the purification of self-complementary synthetic deoxyoligonucleotides by reversed-phase high-performance liquid chromatography. In: Journal of Chromatography A, 355 (1). pp. 328-334.
Ramesh, N and Shouche, Yogesh S and Brahmachari, Samir K (1986) Recognition of B and Z forms of DNA by Escherichia coli DNA polymerase I. In: Journal of Molecular Biology, 190 (4). pp. 635-638.
Latha, PK and Brahmachari, Samir K (1986) B to Z transitions in DNA and their biological implications. In: Journal of Scientific & Industrial Research, 45 (12). pp. 521-533.
Latha, PK and Brahmachari, Samir K (1985) A Novel Structural Transition In Poly(Dg-Me5dc) - Z Reversible B Reversible Z. In: FEBS Letters, 182 (2). pp. 315-318.
Ananthanarayanan, VS and Brahmachari, Samir K and Pattabiramanc, N (1984) Proline-containing β-turns in peptides and proteins: Analysis of structural data on globular proteins. In: Archives of Biochemistry and Biophysics, 232, I (2). pp. 482-495.
Ramesh, N and Brahmachari, Samir K (1983) Critical cation balance in B \rightarrow Z transition: role of $Li^+$. In: FEBS Letters, 164 (1). pp. 33-37.
Rao, Basuthkar Jagadeeswar and Brahmachari, Samir K and Rao, Manchanahalli R Satyanarayana (1983) Structural Organization Of The Meiotic Prophase Chromatin in the Rat Testis. In: Journal of Biological Chemistry, 258 (22). pp. 13478-13485.
Rajagopalan, Malini and Brahmachari, Samir K and Sasisekharan, V and Srivastava, Rakesh (1983) X-Ray diffraction studies on Mycobacterium smegmatis DNA. In: Biopolymers, 22 (7). pp. 1633-1635.
Brahmachari, Samir K and Rapaka, Rao S and Bhatnagar, Rajendra S and Ananthanarayanan, VS (1982) Proline-containing \beta-turns in peptides and proteins. II. Physicochemical studies on tripeptides with the Pro-Gly sequence. In: Biopolymers, 21 (6). pp. 1107-1125.
Sasisekharan, V and Brahmachari, Samir K (1981) B-Transition To Z-Transition In Dna Fiber - The Question Of Handedness Of The Duplex. In: Current Science (Bangalore), 50 (1). pp. 10-13.
Brahmachari, Samir K and Ananthanarayanan, VS and Brahms, S and Brahms, J and Rapaka, Rao S and Bhatnagar, Rajendra S (1979) Vacuum ultraviolet circular dichroism spectrum of β-turn in solution. In: Biochemical and Biophysical Research Communications, 86 (3). pp. 605-612.
Bansal, Manju and Brahmachari, Samir K and Sasisekharan, V (1979) Structural Investigations on Poly(4-hydroxy-L-proline). 1. Theoretical Studies. In: Macromolecules, 12 (1). pp. 19-23.
Brahmachari, Samir K and Bansal, Manju and Ananthanarayanan, VS and Sasisekharan , V (1979) Structural Investigations on Poly(4-hydroxy-L-proline). 2. Physicochemical Studies. In: Macromolecules, 12 (1). pp. 23-28.
Brahmachari, Samir K and Ananthanarayanan, VS (1978) Conformational Criteria for the Enzymatic Hydroxylation of Proline in Collagen. In: Current Science (Bangalore), 47 (4). 107-108 .
Brahmachari, Samir K and Ananthanarayanan, VS and Rapaka, Rao S and Bhatnagar, Rajendra S (1978) Polypeptide Models of Collagen, 11. Solution Properties of $(Pro-Gly-Phe)_n$. In: Biopolymers, 17 (9). pp. 2097-2105.
Brahmachari, Samir K and Ananthanarayanan, VS and Rapaka, Rao S and Bhatnagar, Rajendra S (1978) Polypeptide models of collagen. II. Solution properties of (Pro-Gly-Phe)n. In: Biopolymers, 17 (9). 2097-2105 .
Ananthanarayanan, VS and Brahmachari, Samir K and Rao, Rapaka S and Bhatnagar, Rajendra S (1976) Polypeptide Models of Collagen. Solution Properties of $(Gly-Pro-Sar)_n$, and $(Gly-Sar-Pro)_n$,. In: Biopolymers, 15 (4). pp. 707-716.
Chatterji, Somnath and Jain, Sanjeev and Brahmachari, Samir K and Majumder, Partha and Reich, Theodore (1997) International collaboration in genetics research. In: Nature Genetics, 15 (2). 124-124 .
