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Desikan, R and Behera, A and Maiti, PK and Ayappa, KG (2021) Using multiscale molecular dynamics simulations to obtain insights into pore forming toxin mechanisms. [Book Chapter]
Padmanabhan, P and Desikan, R and Dixit, NM (2022) Modeling how antibody responses may determine the efficacy of COVID-19 vaccines. In: Nature Computational Science, 2 (2). pp. 123-131.
Sharma, P and Desikan, R and Ayappa, KG (2021) Evaluating Coarse-Grained MARTINI Force-Fields for Capturing the Ripple Phase of Lipid Membranes. In: Journal of Physical Chemistry B, 124 (24). pp. 6587-6599.
Desikan, R and Antia, R and Dixit, NM (2021) Physical �strength� of the multi-protein chain connecting immune cells: Does the weakest link limit antibody affinity maturation?: The weakest link in the multi-protein chain facilitating antigen acquisition by B cells in germinal centres limits antibody affinity maturation. In: BioEssays . (In Press)
Garg, AK and Mittal, S and Padmanabhan, P and Desikan, R and Dixit, NM (2021) Increased B Cell Selection Stringency In Germinal Centers Can Explain Improved COVID-19 Vaccine Efficacies With Low Dose Prime or Delayed Boost. In: Frontiers in Immunology, 12 .
Padmanabhan, P and Desikan, R and Dixit, NM (2020) Targeting TMPRSS2 and Cathepsin B/L together may be synergistic against SARSCoV- 2 infection. In: PLoS Computational Biology, 16 (12).
Desikan, R and Raja, R and Dixit, NM (2020) Early exposure to broadly neutralizing antibodies may trigger a dynamical switch from progressive disease to lasting control of SHIV infection. In: PLoS computational biology, 16 (8). e1008064.
Varadarajan, V and Desikan, R and Ayappa, KG (2020) Assessing the extent of the structural and dynamic modulation of membrane lipids due to pore forming toxins: Insights from molecular dynamics simulations. In: Soft Matter, 16 (20). pp. 4840-4857.
Desikan, R and Maiti, PK and Ayappa, KG (2020) Predicting interfacial hot-spot residues that stabilize protein-protein interfaces in oligomeric membrane-toxin pores through hydrogen bonds and salt bridges. In: Journal of Biomolecular Structure and Dynamics .
Desikan, R and Padmanabhan, PK and Ganapathy Ayappa, K (2020) Opening of smaller toxin pores by lipid micelle formation. In: Proceedings of the National Academy of Sciences of the United States of America, 117 (10). pp. 5107-5108.
